RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
NECAP1-224ENST00000640099 E9PSI1 815 aa9.97□□□□□ -0.81
NECAP1-224ENST00000640099 VGFO15240 615 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-224ENST00000640099 YEATS2Q9ULM3 1422 aa9.97□□□□□ -0.81
NECAP1-224ENST00000640099 FBLN1P23142 703 aa9.97□□□□□ -0.81
NECAP1-224ENST00000640099 POGKQ9P215 609 aa9.97□□□□□ -0.81
NECAP1-224ENST00000640099 FRMPD1Q5SYB0 1578 aa9.96□□□□□ -0.81
NECAP1-224ENST00000640099 EVC2Q86UK5 1308 aa9.96□□□□□ -0.82
NECAP1-224ENST00000640099 PPM1GO15355 546 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-224ENST00000640099 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
NECAP1-224ENST00000640099 PRAM1Q96QH2 718 aa9.95□□□□□ -0.82
NECAP1-224ENST00000640099 NPC1L1Q9UHC9 1359 aa9.95□□□□□ -0.82
NECAP1-224ENST00000640099 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
NECAP1-224ENST00000640099 DEKP35659 375 aaKnown RBP9.95□□□□□ -0.82
NECAP1-224ENST00000640099 INSRP06213 1382 aa9.95□□□□□ -0.82
NECAP1-224ENST00000640099 ADGRB3O60242 1522 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 IGHDP01880 384 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 FAM69CQ0P6D2 419 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 TRMT2AQ8IZ69 625 aaKnown RBP9.94□□□□□ -0.82
NECAP1-224ENST00000640099 KDM2BQ8NHM5 1336 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-224ENST00000640099 RUNDC1Q96C34 613 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 CFAP53Q96M91 514 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 NKTRP30414 1462 aaKnown RBP9.94□□□□□ -0.82
NECAP1-224ENST00000640099 MS4A1P11836 297 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 ABCC3O15438 1527 aa9.94□□□□□ -0.82
NECAP1-224ENST00000640099 MLH3Q9UHC1 1453 aa9.93□□□□□ -0.82
NECAP1-224ENST00000640099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.93□□□□□ -0.82
NECAP1-224ENST00000640099 TSR2Q969E8 191 aaKnown RBP9.93□□□□□ -0.82
NECAP1-224ENST00000640099 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
NECAP1-224ENST00000640099 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
NECAP1-224ENST00000640099 NRXN1Q9ULB1 1477 aa9.92□□□□□ -0.82
NECAP1-224ENST00000640099 POLR3AO14802 1390 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-224ENST00000640099 BCL11AQ9H165 835 aa9.92□□□□□ -0.82
NECAP1-224ENST00000640099 RPGRIP1LQ68CZ1 1315 aa9.92□□□□□ -0.82
NECAP1-224ENST00000640099 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
NECAP1-224ENST00000640099 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
NECAP1-224ENST00000640099 RLBP1P12271 317 aa9.91□□□□□ -0.82
NECAP1-224ENST00000640099 ADGRB1O14514 1584 aa9.91□□□□□ -0.82
NECAP1-224ENST00000640099 SBNO2Q9Y2G9 1366 aa9.91□□□□□ -0.82
NECAP1-224ENST00000640099 KIAA1210Q9ULL0 1709 aa9.91□□□□□ -0.82
NECAP1-224ENST00000640099 CABP1Q9NZU7 370 aa9.9□□□□□ -0.82
NECAP1-224ENST00000640099 A0A1W2PP64 1363 aa9.9□□□□□ -0.82
NECAP1-224ENST00000640099 QRICH2Q9H0J4 1663 aa9.9□□□□□ -0.82
NECAP1-224ENST00000640099 RARSP54136 660 aaKnown RBP9.9□□□□□ -0.83
NECAP1-224ENST00000640099 NEFMP07197 916 aa9.89□□□□□ -0.83
NECAP1-224ENST00000640099 SIGLEC1Q9BZZ2 1709 aa9.89□□□□□ -0.83
NECAP1-224ENST00000640099 IFT172Q9UG01 1749 aa9.89□□□□□ -0.83
NECAP1-224ENST00000640099 C8orf34Q49A92 452 aa9.89□□□□□ -0.83
NECAP1-224ENST00000640099 CDK19Q9BWU1 502 aa9.89□□□□□ -0.83
NECAP1-224ENST00000640099 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
NECAP1-224ENST00000640099 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
NECAP1-224ENST00000640099 DAXXQ9UER7 740 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-224ENST00000640099 TULP4Q9NRJ4 1543 aa9.88□□□□□ -0.83
NECAP1-224ENST00000640099 FYB1O15117 783 aa9.88□□□□□ -0.83
NECAP1-224ENST00000640099 ANKRD36BQ8N2N9 1353 aa9.88□□□□□ -0.83
NECAP1-224ENST00000640099 GLI2P10070 1586 aa9.88□□□□□ -0.83
NECAP1-224ENST00000640099 PPLO60437 1756 aa9.87□□□□□ -0.83
NECAP1-224ENST00000640099 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
NECAP1-224ENST00000640099 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
NECAP1-224ENST00000640099 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
NECAP1-224ENST00000640099 DIP2CQ9Y2E4 1556 aa9.87□□□□□ -0.83
NECAP1-224ENST00000640099 EXOSC9Q06265 439 aaKnown RBP9.87□□□□□ -0.83
NECAP1-224ENST00000640099 CAMSAP1Q5T5Y3 1602 aa9.87□□□□□ -0.83
NECAP1-224ENST00000640099 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
NECAP1-224ENST00000640099 TERF2IPQ9NYB0 399 aa9.86□□□□□ -0.83
NECAP1-224ENST00000640099 SETBP1Q9Y6X0 1596 aa9.86□□□□□ -0.83
NECAP1-224ENST00000640099 HMOX1P09601 288 aa9.86□□□□□ -0.83
NECAP1-224ENST00000640099 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
NECAP1-224ENST00000640099 NEXMIFQ5QGS0 1516 aa9.86□□□□□ -0.83
NECAP1-224ENST00000640099 SMC4Q9NTJ3 1288 aa9.85□□□□□ -0.83
NECAP1-224ENST00000640099 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
NECAP1-224ENST00000640099 NEO1Q92859 1461 aa9.85□□□□□ -0.83
NECAP1-224ENST00000640099 SEC24BO95487 1268 aa9.85□□□□□ -0.83
NECAP1-224ENST00000640099 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
NECAP1-224ENST00000640099 HDGFL2Q7Z4V5 671 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-224ENST00000640099 FTSJ3Q8IY81 847 aaKnown RBP9.85□□□□□ -0.83
NECAP1-224ENST00000640099 RIPK4P57078 832 aa9.85□□□□□ -0.83
NECAP1-224ENST00000640099 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
NECAP1-224ENST00000640099 TMPOP42166 694 aaKnown RBP9.84□□□□□ -0.83
NECAP1-224ENST00000640099 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
NECAP1-224ENST00000640099 WDR63Q8IWG1 891 aa9.84□□□□□ -0.83
NECAP1-224ENST00000640099 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
NECAP1-224ENST00000640099 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
NECAP1-224ENST00000640099 CFAP74Q9C0B2 1584 aa9.84□□□□□ -0.83
NECAP1-224ENST00000640099 ELL2O00472 640 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-224ENST00000640099 YTHDC2Q9H6S0 1430 aaKnown RBP9.83□□□□□ -0.84
NECAP1-224ENST00000640099 PIK3C2BO00750 1634 aa9.83□□□□□ -0.84
NECAP1-224ENST00000640099 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
NECAP1-224ENST00000640099 SOX12O15370 315 aa9.83□□□□□ -0.84
NECAP1-224ENST00000640099 ITPRIPQ8IWB1 547 aa9.83□□□□□ -0.84
NECAP1-224ENST00000640099 NGEFQ8N5V2 710 aa9.83□□□□□ -0.84
NECAP1-224ENST00000640099 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
NECAP1-224ENST00000640099 TRIM35Q9UPQ4 493 aa9.83□□□□□ -0.84
NECAP1-224ENST00000640099 SHPRHQ149N8 1683 aa9.82□□□□□ -0.84
NECAP1-224ENST00000640099 SSH1Q8WYL5 1049 aa9.82□□□□□ -0.84
NECAP1-224ENST00000640099 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
NECAP1-224ENST00000640099 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
NECAP1-224ENST00000640099 EMILIN1Q9Y6C2 1016 aa9.82□□□□□ -0.84
NECAP1-224ENST00000640099 TSPOAP1O95153 1857 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms