RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 NUTM2BA6NNL0 878 aaPredicted RBP26.06■■□□□ 1.76
VPS51-217ENST00000639871 NUTM2EB1AL46 878 aaPredicted RBP26.06■■□□□ 1.76
VPS51-217ENST00000639871 NUTM2AQ8IVF1 878 aaPredicted RBP26.06■■□□□ 1.76
VPS51-217ENST00000639871 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
VPS51-217ENST00000639871 C14orf93Q9H972 538 aaKnown RBP26.05■■□□□ 1.76
VPS51-217ENST00000639871 WAPLQ7Z5K2 1190 aa26.04■■□□□ 1.76
VPS51-217ENST00000639871 SIRT1Q96EB6 747 aa26.04■■□□□ 1.76
VPS51-217ENST00000639871 MYOM2P54296 1465 aa26.04■■□□□ 1.76
VPS51-217ENST00000639871 STK26Q9P289 416 aa26.03■■□□□ 1.76
VPS51-217ENST00000639871 YTHDC2Q9H6S0 1430 aaKnown RBP26.02■■□□□ 1.76
VPS51-217ENST00000639871 KNDC1Q76NI1 1749 aa26.01■■□□□ 1.75
VPS51-217ENST00000639871 PLEKHH1Q9ULM0 1364 aa26.01■■□□□ 1.75
VPS51-217ENST00000639871 AFF2P51816 1311 aa26■■□□□ 1.75
VPS51-217ENST00000639871 HRCP23327 699 aa26■■□□□ 1.75
VPS51-217ENST00000639871 ESCO1Q5FWF5 840 aa25.97■■□□□ 1.75
VPS51-217ENST00000639871 NPHP3Q7Z494 1330 aa25.96■■□□□ 1.75
VPS51-217ENST00000639871 RXRBP28702 533 aa25.96■■□□□ 1.75
VPS51-217ENST00000639871 CFAP70Q5T0N1 1121 aa25.96■■□□□ 1.75
VPS51-217ENST00000639871 PXDNQ92626 1479 aa25.96■■□□□ 1.75
VPS51-217ENST00000639871 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
VPS51-217ENST00000639871 C8orf37Q96NL8 207 aa25.93■■□□□ 1.74
VPS51-217ENST00000639871 COL22A1Q8NFW1 1626 aaPredicted RBP25.92■■□□□ 1.74
VPS51-217ENST00000639871 DHX57Q6P158 1386 aaKnown RBP25.92■■□□□ 1.74
VPS51-217ENST00000639871 FOXO3O43524 673 aa25.91■■□□□ 1.74
VPS51-217ENST00000639871 ADAMTS2O95450 1211 aa25.89■■□□□ 1.74
VPS51-217ENST00000639871 QTRT2Q9H974 415 aaKnown RBP25.88■■□□□ 1.73
VPS51-217ENST00000639871 FMN2Q9NZ56 1722 aa25.88■■□□□ 1.73
VPS51-217ENST00000639871 ADGRB1O14514 1584 aa25.87■■□□□ 1.73
VPS51-217ENST00000639871 NUTM2FA1L443 756 aa25.87■■□□□ 1.73
VPS51-217ENST00000639871 FNBP4Q8N3X1 1017 aaPredicted RBP25.87■■□□□ 1.73
VPS51-217ENST00000639871 DLC1Q96QB1 1528 aa25.87■■□□□ 1.73
VPS51-217ENST00000639871 RBM6P78332 1123 aaKnown RBP25.86■■□□□ 1.73
VPS51-217ENST00000639871 NGLY1Q96IV0 654 aa25.86■■□□□ 1.73
VPS51-217ENST00000639871 UPF1Q92900 1129 aaKnown RBP eCLIP25.85■■□□□ 1.73
VPS51-217ENST00000639871 STAC3Q96MF2 364 aa25.85■■□□□ 1.73
VPS51-217ENST00000639871 XPCQ01831 940 aaPredicted RBP25.84■■□□□ 1.73
VPS51-217ENST00000639871 PRAM1Q96QH2 718 aa25.84■■□□□ 1.73
VPS51-217ENST00000639871 RGS12O14924 1447 aa25.81■■□□□ 1.72
VPS51-217ENST00000639871 SPATA31A3Q5VYP0 1347 aa25.81■■□□□ 1.72
VPS51-217ENST00000639871 KIF1AQ12756 1690 aa25.8■■□□□ 1.72
VPS51-217ENST00000639871 DCAF11Q8TEB1 546 aa25.79■■□□□ 1.72
VPS51-217ENST00000639871 USP21Q9UK80 565 aa25.79■■□□□ 1.72
VPS51-217ENST00000639871 PHF8Q9UPP1 1060 aa25.78■■□□□ 1.72
VPS51-217ENST00000639871 ATRNO75882 1429 aa25.77■■□□□ 1.72
VPS51-217ENST00000639871 ADGRB2O60241 1585 aa25.77■■□□□ 1.72
VPS51-217ENST00000639871 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.71
VPS51-217ENST00000639871 TRPC5Q9UL62 973 aaPredicted RBP25.76■■□□□ 1.71
VPS51-217ENST00000639871 KDM2AQ9Y2K7 1162 aa25.76■■□□□ 1.71
VPS51-217ENST00000639871 ANKARQ7Z5J8 1434 aa25.76■■□□□ 1.71
VPS51-217ENST00000639871 BCL9LQ86UU0 1499 aa25.76■■□□□ 1.71
VPS51-217ENST00000639871 SAFB2Q14151 953 aaKnown RBP eCLIP25.75■■□□□ 1.71
VPS51-217ENST00000639871 POGKQ9P215 609 aa25.75■■□□□ 1.71
VPS51-217ENST00000639871 TRAK1Q9UPV9 953 aa25.73■■□□□ 1.71
VPS51-217ENST00000639871 SBNO1A3KN83 1393 aa25.71■■□□□ 1.71
VPS51-217ENST00000639871 USP32Q8NFA0 1604 aa25.71■■□□□ 1.71
VPS51-217ENST00000639871 TNS3Q68CZ2 1445 aa25.71■■□□□ 1.71
VPS51-217ENST00000639871 PSME1Q06323 249 aa25.7■■□□□ 1.7
VPS51-217ENST00000639871 RGPD8O14715 1765 aaPredicted RBP25.69■■□□□ 1.7
VPS51-217ENST00000639871 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
VPS51-217ENST00000639871 SLIT2O94813 1529 aa25.68■■□□□ 1.7
VPS51-217ENST00000639871 PRR36Q9H6K5 1346 aa25.66■■□□□ 1.7
VPS51-217ENST00000639871 HIRIP3Q9BW71 556 aaPredicted RBP25.66■■□□□ 1.7
VPS51-217ENST00000639871 WASLO00401 505 aaPredicted RBP25.65■■□□□ 1.7
VPS51-217ENST00000639871 EIF3AQ14152 1382 aaKnown RBP25.65■■□□□ 1.7
VPS51-217ENST00000639871 MINK1Q8N4C8 1332 aaPredicted RBP25.64■■□□□ 1.7
VPS51-217ENST00000639871 PMFBP1Q8TBY8 1022 aa25.64■■□□□ 1.7
VPS51-217ENST00000639871 ARHGEF10O15013 1369 aa25.64■■□□□ 1.69
VPS51-217ENST00000639871 TULP4Q9NRJ4 1543 aa25.63■■□□□ 1.69
VPS51-217ENST00000639871 UNC5CLQ8IV45 518 aa25.63■■□□□ 1.69
VPS51-217ENST00000639871 GJD4Q96KN9 370 aaPredicted RBP25.63■■□□□ 1.69
VPS51-217ENST00000639871 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.6■■□□□ 1.69
VPS51-217ENST00000639871 ATAD2Q6PL18 1390 aa25.6■■□□□ 1.69
VPS51-217ENST00000639871 CABLES1Q8TDN4 633 aa25.6■■□□□ 1.69
VPS51-217ENST00000639871 ARHGEF28Q8N1W1 1705 aaKnown RBP25.57■■□□□ 1.68
VPS51-217ENST00000639871 TRPM3Q9HCF6 1732 aaPredicted RBP25.57■■□□□ 1.68
VPS51-217ENST00000639871 EP400Q96L91 3159 aa25.56■■□□□ 1.68
VPS51-217ENST00000639871 RALGAPBQ86X10 1494 aa25.56■■□□□ 1.68
VPS51-217ENST00000639871 GLI3P10071 1580 aa25.55■■□□□ 1.68
VPS51-217ENST00000639871 GPRASP1Q5JY77 1395 aa25.55■■□□□ 1.68
VPS51-217ENST00000639871 KIAA1210Q9ULL0 1709 aa25.54■■□□□ 1.68
VPS51-217ENST00000639871 ATP7BP35670 1465 aa25.54■■□□□ 1.68
VPS51-217ENST00000639871 ABCA3Q99758 1704 aa25.54■■□□□ 1.68
VPS51-217ENST00000639871 ALS2Q96Q42 1657 aa25.52■■□□□ 1.68
VPS51-217ENST00000639871 HAP1P54257 671 aaPredicted RBP25.52■■□□□ 1.68
VPS51-217ENST00000639871 VPS72Q15906 364 aa25.52■■□□□ 1.68
VPS51-217ENST00000639871 LMOD2Q6P5Q4 547 aa25.52■■□□□ 1.68
VPS51-217ENST00000639871 NUDT16Q96DE0 195 aaKnown RBP25.52■■□□□ 1.68
VPS51-217ENST00000639871 FAM83GA6ND36 823 aa25.51■■□□□ 1.67
VPS51-217ENST00000639871 NBPF1Q3BBV0 1214 aa25.51■■□□□ 1.67
VPS51-217ENST00000639871 ONECUT3O60422 494 aaPredicted RBP25.5■■□□□ 1.67
VPS51-217ENST00000639871 CDK19Q9BWU1 502 aa25.49■■□□□ 1.67
VPS51-217ENST00000639871 NWD2Q9ULI1 1742 aa25.49■■□□□ 1.67
VPS51-217ENST00000639871 NGDNQ8NEJ9 315 aaKnown RBP25.48■■□□□ 1.67
VPS51-217ENST00000639871 POLR3AO14802 1390 aaPredicted RBP25.46■■□□□ 1.67
VPS51-217ENST00000639871 PLCH1Q4KWH8 1693 aa25.46■■□□□ 1.67
VPS51-217ENST00000639871 CCDC125Q86Z20 511 aa25.46■■□□□ 1.67
VPS51-217ENST00000639871 PLEKHG5O94827 1062 aa25.45■■□□□ 1.66
VPS51-217ENST00000639871 CCDC61Q9Y6R9 512 aa25.45■■□□□ 1.66
VPS51-217ENST00000639871 PLEKHG3A1L390 1219 aa25.44■■□□□ 1.66
VPS51-217ENST00000639871 L3MBTL2Q969R5 705 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms