RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
NECAP1-212ENST00000638787 ATF3P18847 181 aa12.69□□□□□ -0.38
NECAP1-212ENST00000638787 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
NECAP1-212ENST00000638787 ARHGEF28Q8N1W1 1705 aaKnown RBP12.69□□□□□ -0.38
NECAP1-212ENST00000638787 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
NECAP1-212ENST00000638787 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
NECAP1-212ENST00000638787 POGKQ9P215 609 aa12.68□□□□□ -0.38
NECAP1-212ENST00000638787 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
NECAP1-212ENST00000638787 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
NECAP1-212ENST00000638787 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
NECAP1-212ENST00000638787 SAFB2Q14151 953 aaKnown RBP eCLIP12.67□□□□□ -0.38
NECAP1-212ENST00000638787 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
NECAP1-212ENST00000638787 MST1RQ04912 1400 aa12.66□□□□□ -0.38
NECAP1-212ENST00000638787 ROBO1Q9Y6N7 1651 aa12.66□□□□□ -0.38
NECAP1-212ENST00000638787 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
NECAP1-212ENST00000638787 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
NECAP1-212ENST00000638787 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
NECAP1-212ENST00000638787 FMN2Q9NZ56 1722 aa12.63□□□□□ -0.39
NECAP1-212ENST00000638787 MINK1Q8N4C8 1332 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-212ENST00000638787 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
NECAP1-212ENST00000638787 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
NECAP1-212ENST00000638787 CENPJQ9HC77 1338 aaPredicted RBP12.61□□□□□ -0.39
NECAP1-212ENST00000638787 QRICH2Q9H0J4 1663 aa12.61□□□□□ -0.39
NECAP1-212ENST00000638787 HSPA1LP34931 641 aa12.61□□□□□ -0.39
NECAP1-212ENST00000638787 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
NECAP1-212ENST00000638787 EIF3AQ14152 1382 aaKnown RBP12.6□□□□□ -0.39
NECAP1-212ENST00000638787 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
NECAP1-212ENST00000638787 PHLPP1O60346 1717 aa12.58□□□□□ -0.4
NECAP1-212ENST00000638787 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-212ENST00000638787 WASLO00401 505 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-212ENST00000638787 ORAI2Q96SN7 254 aa12.58□□□□□ -0.4
NECAP1-212ENST00000638787 TULP4Q9NRJ4 1543 aa12.57□□□□□ -0.4
NECAP1-212ENST00000638787 RGPD8O14715 1765 aaPredicted RBP12.57□□□□□ -0.4
NECAP1-212ENST00000638787 NHSL1Q5SYE7 1610 aa12.57□□□□□ -0.4
NECAP1-212ENST00000638787 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
NECAP1-212ENST00000638787 ANKARQ7Z5J8 1434 aa12.57□□□□□ -0.4
NECAP1-212ENST00000638787 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
NECAP1-212ENST00000638787 COL16A1Q07092 1604 aaPredicted RBP12.55□□□□□ -0.4
NECAP1-212ENST00000638787 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
NECAP1-212ENST00000638787 CDK19Q9BWU1 502 aa12.55□□□□□ -0.4
NECAP1-212ENST00000638787 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
NECAP1-212ENST00000638787 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
NECAP1-212ENST00000638787 ATP7BP35670 1465 aa12.53□□□□□ -0.4
NECAP1-212ENST00000638787 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
NECAP1-212ENST00000638787 USP47Q96K76 1375 aa12.53□□□□□ -0.4
NECAP1-212ENST00000638787 ITSN1Q15811 1721 aa12.53□□□□□ -0.4
NECAP1-212ENST00000638787 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.4
NECAP1-212ENST00000638787 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
NECAP1-212ENST00000638787 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
NECAP1-212ENST00000638787 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.41
NECAP1-212ENST00000638787 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.41
NECAP1-212ENST00000638787 NPHP3Q7Z494 1330 aa12.51□□□□□ -0.41
NECAP1-212ENST00000638787 ST20-MTHFSA0A0A6YYL1 179 aa12.51□□□□□ -0.41
NECAP1-212ENST00000638787 FOXO3O43524 673 aa12.51□□□□□ -0.41
NECAP1-212ENST00000638787 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
NECAP1-212ENST00000638787 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
NECAP1-212ENST00000638787 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
NECAP1-212ENST00000638787 PXDNQ92626 1479 aa12.5□□□□□ -0.41
NECAP1-212ENST00000638787 JCADQ9P266 1359 aa12.49□□□□□ -0.41
NECAP1-212ENST00000638787 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-212ENST00000638787 TESK2Q96S53 571 aa12.49□□□□□ -0.41
NECAP1-212ENST00000638787 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
NECAP1-212ENST00000638787 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
NECAP1-212ENST00000638787 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
NECAP1-212ENST00000638787 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
NECAP1-212ENST00000638787 PSME1Q06323 249 aa12.46□□□□□ -0.41
NECAP1-212ENST00000638787 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
NECAP1-212ENST00000638787 NGDNQ8NEJ9 315 aaKnown RBP12.46□□□□□ -0.41
NECAP1-212ENST00000638787 ATAD2Q6PL18 1390 aa12.46□□□□□ -0.42
NECAP1-212ENST00000638787 PNPLA6Q8IY17 1366 aa12.46□□□□□ -0.42
NECAP1-212ENST00000638787 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.42
NECAP1-212ENST00000638787 SLC24A1O60721 1099 aa12.46□□□□□ -0.42
NECAP1-212ENST00000638787 POLR3AO14802 1390 aaPredicted RBP12.45□□□□□ -0.42
NECAP1-212ENST00000638787 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
NECAP1-212ENST00000638787 ACEP12821 1306 aa12.44□□□□□ -0.42
NECAP1-212ENST00000638787 TRPM3Q9HCF6 1732 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-212ENST00000638787 DISP3Q9P2K9 1392 aa12.44□□□□□ -0.42
NECAP1-212ENST00000638787 HSPA5P11021 654 aaKnown RBP12.44□□□□□ -0.42
NECAP1-212ENST00000638787 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
NECAP1-212ENST00000638787 TNS3Q68CZ2 1445 aa12.44□□□□□ -0.42
NECAP1-212ENST00000638787 MED1Q15648 1581 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-212ENST00000638787 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
NECAP1-212ENST00000638787 TMF1P82094 1093 aa12.43□□□□□ -0.42
NECAP1-212ENST00000638787 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
NECAP1-212ENST00000638787 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
NECAP1-212ENST00000638787 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
NECAP1-212ENST00000638787 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-212ENST00000638787 MSH5O43196 834 aa12.41□□□□□ -0.42
NECAP1-212ENST00000638787 ALS2Q96Q42 1657 aa12.41□□□□□ -0.42
NECAP1-212ENST00000638787 LRP6O75581 1613 aa12.4□□□□□ -0.42
NECAP1-212ENST00000638787 AKAP12Q02952 1782 aa12.4□□□□□ -0.42
NECAP1-212ENST00000638787 ARHGEF10O15013 1369 aa12.4□□□□□ -0.42
NECAP1-212ENST00000638787 NUTM2BA6NNL0 878 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-212ENST00000638787 NUTM2EB1AL46 878 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-212ENST00000638787 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-212ENST00000638787 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
NECAP1-212ENST00000638787 NUTM2AQ8IVF1 878 aaPredicted RBP12.39□□□□□ -0.43
NECAP1-212ENST00000638787 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
NECAP1-212ENST00000638787 USP6P35125 1406 aa12.39□□□□□ -0.43
NECAP1-212ENST00000638787 CDCA8Q53HL2 280 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms