RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 PLIN1O60240 522 aa15.48■□□□□ 0.07
GFAP-228ENST00000638488 NOS1P29475 1434 aa15.48■□□□□ 0.07
GFAP-228ENST00000638488 EIF3AQ14152 1382 aaKnown RBP15.48■□□□□ 0.07
GFAP-228ENST00000638488 USP19O94966 1318 aa15.48■□□□□ 0.07
GFAP-228ENST00000638488 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
GFAP-228ENST00000638488 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
GFAP-228ENST00000638488 MAP3K4Q9Y6R4 1608 aa15.46■□□□□ 0.07
GFAP-228ENST00000638488 CDCA8Q53HL2 280 aa15.46■□□□□ 0.07
GFAP-228ENST00000638488 MYH16Q9H6N6 1097 aa15.46■□□□□ 0.06
GFAP-228ENST00000638488 TRAK1Q9UPV9 953 aa15.46■□□□□ 0.06
GFAP-228ENST00000638488 NEO1Q92859 1461 aa15.45■□□□□ 0.06
GFAP-228ENST00000638488 TERF1P54274 439 aa15.45■□□□□ 0.06
GFAP-228ENST00000638488 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
GFAP-228ENST00000638488 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
GFAP-228ENST00000638488 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
GFAP-228ENST00000638488 LMTK2Q8IWU2 1503 aa15.44■□□□□ 0.06
GFAP-228ENST00000638488 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
GFAP-228ENST00000638488 YEATS2Q9ULM3 1422 aa15.43■□□□□ 0.06
GFAP-228ENST00000638488 MYOM2P54296 1465 aa15.43■□□□□ 0.06
GFAP-228ENST00000638488 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
GFAP-228ENST00000638488 MCM4P33991 863 aa15.42■□□□□ 0.06
GFAP-228ENST00000638488 NLRP1Q9C000 1473 aa15.42■□□□□ 0.06
GFAP-228ENST00000638488 ABCC3O15438 1527 aa15.42■□□□□ 0.06
GFAP-228ENST00000638488 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
GFAP-228ENST00000638488 GRPEL1Q9HAV7 217 aa15.41■□□□□ 0.06
GFAP-228ENST00000638488 SMAP1Q8IYB5 467 aaPredicted RBP15.41■□□□□ 0.06
GFAP-228ENST00000638488 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
GFAP-228ENST00000638488 ADGRB3O60242 1522 aa15.4■□□□□ 0.06
GFAP-228ENST00000638488 RGS3P49796 1198 aa15.4■□□□□ 0.06
GFAP-228ENST00000638488 TRIM44Q96DX7 344 aaPredicted RBP15.4■□□□□ 0.06
GFAP-228ENST00000638488 AMER1Q5JTC6 1135 aaPredicted RBP15.39■□□□□ 0.05
GFAP-228ENST00000638488 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
GFAP-228ENST00000638488 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
GFAP-228ENST00000638488 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
GFAP-228ENST00000638488 IFT172Q9UG01 1749 aa15.39■□□□□ 0.05
GFAP-228ENST00000638488 KIAA1210Q9ULL0 1709 aa15.39■□□□□ 0.05
GFAP-228ENST00000638488 NEURL4Q96JN8 1562 aa15.38■□□□□ 0.05
GFAP-228ENST00000638488 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
GFAP-228ENST00000638488 ARXQ96QS3 562 aa15.38■□□□□ 0.05
GFAP-228ENST00000638488 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
GFAP-228ENST00000638488 SYNMO15061 1565 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 PDE4CQ08493 712 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 RICTORQ6R327 1708 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 ERVK-7P63135 1459 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 RIMBP3CA6NJZ7 1639 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 RIMBP3BA6NNM3 1639 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 RIMBP3Q9UFD9 1639 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 TRAK2O60296 914 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
GFAP-228ENST00000638488 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
GFAP-228ENST00000638488 TSPOAP1O95153 1857 aa15.36■□□□□ 0.05
GFAP-228ENST00000638488 IDI1Q13907 227 aa15.36■□□□□ 0.05
GFAP-228ENST00000638488 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
GFAP-228ENST00000638488 SIGLEC1Q9BZZ2 1709 aa15.36■□□□□ 0.05
GFAP-228ENST00000638488 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
GFAP-228ENST00000638488 MTERF4Q7Z6M4 381 aaKnown RBP15.36■□□□□ 0.05
GFAP-228ENST00000638488 MAPK8IP3Q9UPT6 1336 aa15.36■□□□□ 0.05
GFAP-228ENST00000638488 ZMYM3Q14202 1370 aa15.35■□□□□ 0.05
GFAP-228ENST00000638488 C14orf93Q9H972 538 aaKnown RBP15.35■□□□□ 0.05
GFAP-228ENST00000638488 MYOM1P52179 1685 aa15.35■□□□□ 0.05
GFAP-228ENST00000638488 OFD1O75665 1012 aa15.35■□□□□ 0.05
GFAP-228ENST00000638488 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.35■□□□□ 0.05
GFAP-228ENST00000638488 ASXL1Q8IXJ9 1541 aa15.34■□□□□ 0.05
GFAP-228ENST00000638488 NRXN1Q9ULB1 1477 aa15.34■□□□□ 0.05
GFAP-228ENST00000638488 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
GFAP-228ENST00000638488 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
GFAP-228ENST00000638488 MLECQ14165 292 aa15.34■□□□□ 0.05
GFAP-228ENST00000638488 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
GFAP-228ENST00000638488 FBXO31Q5XUX0 539 aaPredicted RBP15.33■□□□□ 0.05
GFAP-228ENST00000638488 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.05
GFAP-228ENST00000638488 PPLO60437 1756 aa15.33■□□□□ 0.05
GFAP-228ENST00000638488 STK26Q9P289 416 aa15.33■□□□□ 0.04
GFAP-228ENST00000638488 VGFO15240 615 aaPredicted RBP15.32■□□□□ 0.04
GFAP-228ENST00000638488 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
GFAP-228ENST00000638488 RIPK4P57078 832 aa15.32■□□□□ 0.04
GFAP-228ENST00000638488 TBC1D2Q9BYX2 928 aa15.32■□□□□ 0.04
GFAP-228ENST00000638488 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
GFAP-228ENST00000638488 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
GFAP-228ENST00000638488 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
GFAP-228ENST00000638488 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
GFAP-228ENST00000638488 UTP14CQ5TAP6 766 aaKnown RBP15.31■□□□□ 0.04
GFAP-228ENST00000638488 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
GFAP-228ENST00000638488 TBC1D32Q96NH3 1257 aa15.3■□□□□ 0.04
GFAP-228ENST00000638488 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
GFAP-228ENST00000638488 ZSCAN30Q86W11 494 aa15.3■□□□□ 0.04
GFAP-228ENST00000638488 SEC24BO95487 1268 aa15.29■□□□□ 0.04
GFAP-228ENST00000638488 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
GFAP-228ENST00000638488 CCDC173Q0VFZ6 552 aa15.29■□□□□ 0.04
GFAP-228ENST00000638488 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
GFAP-228ENST00000638488 SETBP1Q9Y6X0 1596 aa15.28■□□□□ 0.04
GFAP-228ENST00000638488 GLI2P10070 1586 aa15.28■□□□□ 0.04
GFAP-228ENST00000638488 PPP1R9BQ96SB3 815 aa15.28■□□□□ 0.04
GFAP-228ENST00000638488 ADGRB1O14514 1584 aa15.27■□□□□ 0.04
GFAP-228ENST00000638488 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.04
GFAP-228ENST00000638488 QRICH2Q9H0J4 1663 aa15.27■□□□□ 0.03
GFAP-228ENST00000638488 NEXMIFQ5QGS0 1516 aa15.26■□□□□ 0.03
GFAP-228ENST00000638488 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
GFAP-228ENST00000638488 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
GFAP-228ENST00000638488 CABP2Q9NPB3 220 aa15.26■□□□□ 0.03
GFAP-228ENST00000638488 PIK3C2BO00750 1634 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms