RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 LRRC59Q96AG4 307 aaKnown RBP24.75■■□□□ 1.55
CTSD-214ENST00000637937 PLEKHH1Q9ULM0 1364 aa24.75■■□□□ 1.55
CTSD-214ENST00000637937 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
CTSD-214ENST00000637937 NUTM2FA1L443 756 aa24.72■■□□□ 1.55
CTSD-214ENST00000637937 ESCO1Q5FWF5 840 aa24.72■■□□□ 1.55
CTSD-214ENST00000637937 SIRT1Q96EB6 747 aa24.72■■□□□ 1.55
CTSD-214ENST00000637937 NUTM2BA6NNL0 878 aaPredicted RBP24.71■■□□□ 1.55
CTSD-214ENST00000637937 NUTM2EB1AL46 878 aaPredicted RBP24.71■■□□□ 1.55
CTSD-214ENST00000637937 NUTM2AQ8IVF1 878 aaPredicted RBP24.71■■□□□ 1.55
CTSD-214ENST00000637937 STAC3Q96MF2 364 aa24.71■■□□□ 1.55
CTSD-214ENST00000637937 SAFB2Q14151 953 aaKnown RBP eCLIP24.68■■□□□ 1.54
CTSD-214ENST00000637937 PRAM1Q96QH2 718 aa24.68■■□□□ 1.54
CTSD-214ENST00000637937 POGKQ9P215 609 aa24.68■■□□□ 1.54
CTSD-214ENST00000637937 LAMC1P11047 1609 aa24.68■■□□□ 1.54
CTSD-214ENST00000637937 NHSL1Q5SYE7 1610 aa24.68■■□□□ 1.54
CTSD-214ENST00000637937 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
CTSD-214ENST00000637937 KNDC1Q76NI1 1749 aa24.67■■□□□ 1.54
CTSD-214ENST00000637937 POTEAQ6S8J7 498 aa24.66■■□□□ 1.54
CTSD-214ENST00000637937 TRAK1Q9UPV9 953 aa24.66■■□□□ 1.54
CTSD-214ENST00000637937 LRP6O75581 1613 aa24.65■■□□□ 1.54
CTSD-214ENST00000637937 SHPRHQ149N8 1683 aa24.65■■□□□ 1.54
CTSD-214ENST00000637937 SOS2Q07890 1332 aaPredicted RBP24.63■■□□□ 1.53
CTSD-214ENST00000637937 NPHP3Q7Z494 1330 aa24.62■■□□□ 1.53
CTSD-214ENST00000637937 FOXO3O43524 673 aa24.62■■□□□ 1.53
CTSD-214ENST00000637937 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
CTSD-214ENST00000637937 ADGRB1O14514 1584 aa24.59■■□□□ 1.53
CTSD-214ENST00000637937 XPCQ01831 940 aaPredicted RBP24.59■■□□□ 1.53
CTSD-214ENST00000637937 ZNF772Q68DY9 489 aaPredicted RBP24.58■■□□□ 1.53
CTSD-214ENST00000637937 DLC1Q96QB1 1528 aa24.57■■□□□ 1.52
CTSD-214ENST00000637937 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
CTSD-214ENST00000637937 ADAMTS2O95450 1211 aa24.54■■□□□ 1.52
CTSD-214ENST00000637937 C8orf37Q96NL8 207 aa24.54■■□□□ 1.52
CTSD-214ENST00000637937 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
CTSD-214ENST00000637937 FMN2Q9NZ56 1722 aa24.52■■□□□ 1.52
CTSD-214ENST00000637937 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
CTSD-214ENST00000637937 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
CTSD-214ENST00000637937 PHF8Q9UPP1 1060 aa24.52■■□□□ 1.52
CTSD-214ENST00000637937 AFF2P51816 1311 aa24.51■■□□□ 1.51
CTSD-214ENST00000637937 PXDNQ92626 1479 aa24.51■■□□□ 1.51
CTSD-214ENST00000637937 KRT28Q7Z3Y7 464 aa24.49■■□□□ 1.51
CTSD-214ENST00000637937 NGLY1Q96IV0 654 aa24.49■■□□□ 1.51
CTSD-214ENST00000637937 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
CTSD-214ENST00000637937 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
CTSD-214ENST00000637937 NBPF1Q3BBV0 1214 aa24.47■■□□□ 1.51
CTSD-214ENST00000637937 PMFBP1Q8TBY8 1022 aa24.47■■□□□ 1.51
CTSD-214ENST00000637937 WASLO00401 505 aaPredicted RBP24.46■■□□□ 1.51
CTSD-214ENST00000637937 PSME1Q06323 249 aa24.46■■□□□ 1.51
CTSD-214ENST00000637937 RXRBP28702 533 aa24.45■■□□□ 1.5
CTSD-214ENST00000637937 ANKARQ7Z5J8 1434 aa24.44■■□□□ 1.5
CTSD-214ENST00000637937 EIF3AQ14152 1382 aaKnown RBP24.44■■□□□ 1.5
CTSD-214ENST00000637937 KIF1AQ12756 1690 aa24.44■■□□□ 1.5
CTSD-214ENST00000637937 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
CTSD-214ENST00000637937 ADGRB2O60241 1585 aa24.42■■□□□ 1.5
CTSD-214ENST00000637937 QTRT2Q9H974 415 aaKnown RBP24.42■■□□□ 1.5
CTSD-214ENST00000637937 LMOD2Q6P5Q4 547 aa24.41■■□□□ 1.5
CTSD-214ENST00000637937 PRR36Q9H6K5 1346 aa24.39■■□□□ 1.5
CTSD-214ENST00000637937 PLEKHG5O94827 1062 aa24.39■■□□□ 1.49
CTSD-214ENST00000637937 RGPD8O14715 1765 aaPredicted RBP24.39■■□□□ 1.49
CTSD-214ENST00000637937 COL22A1Q8NFW1 1626 aaPredicted RBP24.39■■□□□ 1.49
CTSD-214ENST00000637937 USP21Q9UK80 565 aa24.38■■□□□ 1.49
CTSD-214ENST00000637937 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
CTSD-214ENST00000637937 TULP4Q9NRJ4 1543 aa24.37■■□□□ 1.49
CTSD-214ENST00000637937 HAP1P54257 671 aaPredicted RBP24.37■■□□□ 1.49
CTSD-214ENST00000637937 CDK19Q9BWU1 502 aa24.37■■□□□ 1.49
CTSD-214ENST00000637937 USP32Q8NFA0 1604 aa24.36■■□□□ 1.49
CTSD-214ENST00000637937 ARHGEF28Q8N1W1 1705 aaKnown RBP24.36■■□□□ 1.49
CTSD-214ENST00000637937 NGDNQ8NEJ9 315 aaKnown RBP24.36■■□□□ 1.49
CTSD-214ENST00000637937 NUDT16Q96DE0 195 aaKnown RBP24.36■■□□□ 1.49
CTSD-214ENST00000637937 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
CTSD-214ENST00000637937 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
CTSD-214ENST00000637937 GPRASP1Q5JY77 1395 aa24.35■■□□□ 1.49
CTSD-214ENST00000637937 FNBP4Q8N3X1 1017 aaPredicted RBP24.35■■□□□ 1.49
CTSD-214ENST00000637937 RBM6P78332 1123 aaKnown RBP24.34■■□□□ 1.49
CTSD-214ENST00000637937 CABLES1Q8TDN4 633 aa24.33■■□□□ 1.49
CTSD-214ENST00000637937 CENPJQ9HC77 1338 aaPredicted RBP24.33■■□□□ 1.48
CTSD-214ENST00000637937 TRPC5Q9UL62 973 aaPredicted RBP24.32■■□□□ 1.48
CTSD-214ENST00000637937 ARHGEF10O15013 1369 aa24.31■■□□□ 1.48
CTSD-214ENST00000637937 PAK3O75914 559 aaPredicted RBP24.3■■□□□ 1.48
CTSD-214ENST00000637937 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
CTSD-214ENST00000637937 SRPK2P78362 688 aaKnown RBP24.28■■□□□ 1.48
CTSD-214ENST00000637937 ATP7BP35670 1465 aa24.27■■□□□ 1.48
CTSD-214ENST00000637937 CCDC61Q9Y6R9 512 aa24.27■■□□□ 1.48
CTSD-214ENST00000637937 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
CTSD-214ENST00000637937 TONSLQ96HA7 1378 aa24.25■■□□□ 1.47
CTSD-214ENST00000637937 NBPF8Q3BBV2 869 aa24.24■■□□□ 1.47
CTSD-214ENST00000637937 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
CTSD-214ENST00000637937 BCL9LQ86UU0 1499 aa24.23■■□□□ 1.47
CTSD-214ENST00000637937 RGS12O14924 1447 aa24.22■■□□□ 1.47
CTSD-214ENST00000637937 ATRNO75882 1429 aa24.22■■□□□ 1.47
CTSD-214ENST00000637937 ACEP12821 1306 aa24.22■■□□□ 1.47
CTSD-214ENST00000637937 UNC5CLQ8IV45 518 aa24.22■■□□□ 1.47
CTSD-214ENST00000637937 TRPM1Q7Z4N2 1603 aa24.21■■□□□ 1.47
CTSD-214ENST00000637937 PLEKHG3A1L390 1219 aa24.2■■□□□ 1.46
CTSD-214ENST00000637937 GJD4Q96KN9 370 aaPredicted RBP24.19■■□□□ 1.46
CTSD-214ENST00000637937 ITSN1Q15811 1721 aa24.18■■□□□ 1.46
CTSD-214ENST00000637937 MARF1Q9Y4F3 1742 aaKnown RBP24.18■■□□□ 1.46
CTSD-214ENST00000637937 UPF1Q92900 1129 aaKnown RBP eCLIP24.18■■□□□ 1.461e-13■■■■■ 71.7
CTSD-214ENST00000637937 SLIT2O94813 1529 aa24.18■■□□□ 1.46
CTSD-214ENST00000637937 TRPM3Q9HCF6 1732 aaPredicted RBP24.18■■□□□ 1.46
CTSD-214ENST00000637937 POLR3AO14802 1390 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms