RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 EID1Q9Y6B2 187 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 PIK3C2GO75747 1445 aa12.63□□□□□ -0.39
CACNA1A-248ENST00000637774 DIP2CQ9Y2E4 1556 aa12.63□□□□□ -0.39
CACNA1A-248ENST00000637774 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-248ENST00000637774 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
CACNA1A-248ENST00000637774 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
CACNA1A-248ENST00000637774 MYOM2P54296 1465 aa12.62□□□□□ -0.39
CACNA1A-248ENST00000637774 MAP3K4Q9Y6R4 1608 aa12.62□□□□□ -0.39
CACNA1A-248ENST00000637774 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
CACNA1A-248ENST00000637774 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNA1A-248ENST00000637774 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
CACNA1A-248ENST00000637774 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
CACNA1A-248ENST00000637774 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-248ENST00000637774 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
CACNA1A-248ENST00000637774 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
CACNA1A-248ENST00000637774 BCAR3O75815 825 aa12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 HMOX1P09601 288 aa12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 ZBTB7CA1YPR0 619 aa12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 POLR1AO95602 1720 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 RIMS2Q9UQ26 1411 aa12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
CACNA1A-248ENST00000637774 LMTK2Q8IWU2 1503 aa12.59□□□□□ -0.39
CACNA1A-248ENST00000637774 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
CACNA1A-248ENST00000637774 FYB1O15117 783 aa12.59□□□□□ -0.39
CACNA1A-248ENST00000637774 PPP6R1Q9UPN7 881 aa12.59□□□□□ -0.39
CACNA1A-248ENST00000637774 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.39
CACNA1A-248ENST00000637774 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.39
CACNA1A-248ENST00000637774 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.39
CACNA1A-248ENST00000637774 ADGRB3O60242 1522 aa12.58□□□□□ -0.4
CACNA1A-248ENST00000637774 RGS3P49796 1198 aa12.58□□□□□ -0.4
CACNA1A-248ENST00000637774 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
CACNA1A-248ENST00000637774 E9PSI1 815 aa12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 NME9Q86XW9 330 aa12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 MROH2AA6NES4 1674 aa12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 TNRQ92752 1358 aa12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 WWC1Q8IX03 1113 aa12.57□□□□□ -0.4
CACNA1A-248ENST00000637774 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
CACNA1A-248ENST00000637774 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
CACNA1A-248ENST00000637774 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-248ENST00000637774 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
CACNA1A-248ENST00000637774 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-248ENST00000637774 ANKRD36BQ8N2N9 1353 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 DIP2BQ9P265 1576 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 LTKP29376 864 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 COG3Q96JB2 828 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 COG6Q9Y2V7 657 aa12.55□□□□□ -0.4
CACNA1A-248ENST00000637774 ELL2O00472 640 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-248ENST00000637774 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
CACNA1A-248ENST00000637774 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
CACNA1A-248ENST00000637774 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
CACNA1A-248ENST00000637774 RIPK4P57078 832 aa12.54□□□□□ -0.4
CACNA1A-248ENST00000637774 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
CACNA1A-248ENST00000637774 PANK1Q8TE04 598 aa12.53□□□□□ -0.4
CACNA1A-248ENST00000637774 SYNMO15061 1565 aa12.53□□□□□ -0.4
CACNA1A-248ENST00000637774 KDM5AP29375 1690 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-248ENST00000637774 METP08581 1390 aa12.53□□□□□ -0.4
CACNA1A-248ENST00000637774 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.4
CACNA1A-248ENST00000637774 LAMC1P11047 1609 aa12.52□□□□□ -0.41
CACNA1A-248ENST00000637774 AMOTL2Q9Y2J4 779 aa12.52□□□□□ -0.41
CACNA1A-248ENST00000637774 IQGAP1P46940 1657 aa12.52□□□□□ -0.41
CACNA1A-248ENST00000637774 PRKAR2BP31323 418 aa12.52□□□□□ -0.41
CACNA1A-248ENST00000637774 NPC1L1Q9UHC9 1359 aa12.51□□□□□ -0.41
CACNA1A-248ENST00000637774 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-248ENST00000637774 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
CACNA1A-248ENST00000637774 ANP32AP39687 249 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-248ENST00000637774 THEMISQ8N1K5 641 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-248ENST00000637774 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-248ENST00000637774 MYH16Q9H6N6 1097 aa12.5□□□□□ -0.41
CACNA1A-248ENST00000637774 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-248ENST00000637774 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-248ENST00000637774 NRXN1Q9ULB1 1477 aa12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 NEXMIFQ5QGS0 1516 aa12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 SIGLEC1Q9BZZ2 1709 aa12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 GLI2P10070 1586 aa12.49□□□□□ -0.41
CACNA1A-248ENST00000637774 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
CACNA1A-248ENST00000637774 ADGRB1O14514 1584 aa12.48□□□□□ -0.41
CACNA1A-248ENST00000637774 TMPOP42166 694 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-248ENST00000637774 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
CACNA1A-248ENST00000637774 EXOSC9Q06265 439 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-248ENST00000637774 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
CACNA1A-248ENST00000637774 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-248ENST00000637774 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-248ENST00000637774 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
CACNA1A-248ENST00000637774 CLTCQ00610 1675 aaKnown RBP12.46□□□□□ -0.42
CACNA1A-248ENST00000637774 TMEM2Q9UHN6 1383 aa12.46□□□□□ -0.42
CACNA1A-248ENST00000637774 PPIP5K1Q6PFW1 1433 aa12.46□□□□□ -0.42
CACNA1A-248ENST00000637774 ACEP12821 1306 aa12.45□□□□□ -0.42
CACNA1A-248ENST00000637774 AMPHP49418 695 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms