RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 GJD4Q96KN9 370 aaPredicted RBP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 NOVA2Q9UNW9 492 aaKnown RBP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 FARP1Q9Y4F1 1045 aaPredicted RBP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 NUTM2BA6NNL0 878 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 NUTM2EB1AL46 878 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 HMGB1P1B2RPK0 211 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 ATP9BO43861 1147 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 PEX14O75381 377 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 CENPBP07199 599 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 C7P10643 843 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 ATP2B1P20020 1258 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 SOX11P35716 441 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 FOXK1P85037 733 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 HDLBPQ00341 1268 aaKnown RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 TUSC1Q2TAM9 212 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 CCDC144BQ3MJ40 725 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 HSP90AB2PQ58FF8 381 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 NUTM2DQ5VT03 806 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 EGFLAMQ63HQ2 1017 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 TBC1D9Q6ZT07 1266 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 FBXO33Q7Z6M2 555 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 NUTM2AQ8IVF1 878 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 PLPP6Q8IY26 295 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 LARGE2Q8N3Y3 721 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 PRR7Q8TB68 274 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 UPF1Q92900 1129 aaKnown RBP eCLIP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 CDHR5Q9HBB8 845 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 IQSEC3Q9UPP2 1182 aaPredicted RBP4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 CCDC61Q9Y6R9 512 aa4.69□□□□□ -1.66
CHRNA4-220ENST00000637628 SCAMP3O14828 347 aaKnown RBP4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 SPTLC1O15269 473 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 MAP4K4O95819 1239 aaPredicted RBP4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 PTMSP20962 102 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 MAPK1P28482 360 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 QPCTQ16769 361 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 RTL5Q5HYW3 569 aaPredicted RBP4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 PMFBP1Q8TBY8 1022 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 SPIRE2Q8WWL2 714 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 KCNB2Q92953 911 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 SPACA7Q96KW9 195 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 MAGEC2Q9UBF1 373 aaPredicted RBP4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 PRKAG2Q9UGJ0 569 aa4.68□□□□□ -1.66
CHRNA4-220ENST00000637628 MCCD1P59942 119 aaPredicted RBP4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 FAM161AQ3B820 660 aa4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 KANK4Q5T7N3 995 aaPredicted RBP4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 RSBN1LQ6PCB5 846 aaPredicted RBP4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 METTL3Q86U44 580 aaKnown RBP4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 PLCD4Q9BRC7 762 aa4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 BACH2Q9BYV9 841 aa4.67□□□□□ -1.66
CHRNA4-220ENST00000637628 MAFGO15525 162 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 MAP3K13O43283 966 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 LILRB3O75022 631 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 PARNO95453 639 aaKnown RBP4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 OATP04181 439 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 ATP2B4P23634 1241 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 PSME1Q06323 249 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 EAPPQ56P03 285 aaPredicted RBP4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 RNF187Q5TA31 235 aaPredicted RBP4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 SPTY2D1Q68D10 685 aaPredicted RBP4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 APBB1IPQ7Z5R6 666 aaPredicted RBP4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 NUTM1Q86Y26 1132 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 ZCRB1Q8TBF4 217 aaKnown RBP4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 ZSWIM4Q9H7M6 989 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 CAPN10Q9HC96 672 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 TBX22Q9Y458 520 aa4.66□□□□□ -1.66
CHRNA4-220ENST00000637628 CCDC194A0A1B0GVG4 234 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 ABL1P00519 1130 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 FAM50AQ14320 339 aaKnown RBP4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 RALBP1Q15311 655 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 ZSCAN29Q8IWY8 852 aaPredicted RBP4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 CCDC136Q96JN2 1154 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 TINF2Q9BSI4 451 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 PIF1Q9H611 641 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 CCSER2Q9H7U1 834 aa4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 HMX1Q9NP08 348 aaPredicted RBP4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 NPDC1Q9NQX5 325 aaPredicted RBP4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 NOP58Q9Y2X3 529 aaKnown RBP4.65□□□□□ -1.67
CHRNA4-220ENST00000637628 MOXD2PA6NHM9 499 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 H3BRB1 525 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 MAP3K7O43318 606 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 LZTS3O60299 673 aaPredicted RBP4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 GPR37L1O60883 481 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 RAD51AP2Q09MP3 1159 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 NT5DC4Q86YG4 428 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 SMC5Q8IY18 1101 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 SLC43A3Q8NBI5 491 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 CABLES1Q8TDN4 633 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 CLP1Q92989 425 aaKnown RBP4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 ASB16Q96NS5 453 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 TUT1Q9H6E5 874 aaKnown RBP4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 CHPF2Q9P2E5 772 aa4.64□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L15C9J2P7 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L10C9JJH3 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L13C9JLJ4 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L12C9JPN9 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L11C9JVI0 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L21D6R901 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L18D6R9N7 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L22D6RA61 530 aa4.63□□□□□ -1.67
CHRNA4-220ENST00000637628 USP17L17D6RBQ6 530 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms