RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 HDAC5Q9UQL6 1122 aa7.9□□□□□ -1.14
SCN2A-216ENST00000637367 GAPVD1Q14C86 1478 aa7.9□□□□□ -1.14
SCN2A-216ENST00000637367 HOMER1Q86YM7 354 aa7.9□□□□□ -1.15
SCN2A-216ENST00000637367 KIF3AQ9Y496 699 aa7.9□□□□□ -1.15
SCN2A-216ENST00000637367 PRKCSHP14314 528 aaPredicted RBP7.89□□□□□ -1.15
SCN2A-216ENST00000637367 NOC3LQ8WTT2 800 aaKnown RBP7.89□□□□□ -1.15
SCN2A-216ENST00000637367 GRPEL1Q9HAV7 217 aa7.89□□□□□ -1.15
SCN2A-216ENST00000637367 MIA2Q96PC5 1412 aa7.89□□□□□ -1.15
SCN2A-216ENST00000637367 KDM4AO75164 1064 aa7.89□□□□□ -1.15
SCN2A-216ENST00000637367 RUFY2Q8WXA3 655 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 CHMP4AQ9BY43 222 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 AQRO60306 1485 aaKnown RBP eCLIP7.88□□□□□ -1.15
SCN2A-216ENST00000637367 ESPNB1AK53 854 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 TPM3P06753 285 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 AIMP1Q12904 312 aaKnown RBP7.88□□□□□ -1.15
SCN2A-216ENST00000637367 GOLGA6L1Q8N7Z2 621 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 SPC24Q8NBT2 197 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 HFM1A2PYH4 1435 aa7.88□□□□□ -1.15
SCN2A-216ENST00000637367 A0A0U1RQG5 324 aaPredicted RBP7.87□□□□□ -1.15
SCN2A-216ENST00000637367 SURF6O75683 361 aaKnown RBP7.87□□□□□ -1.15
SCN2A-216ENST00000637367 CCDC34Q96HJ3 373 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 FMNL2Q96PY5 1086 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 FYCO1Q9BQS8 1478 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 CPLX1O14810 134 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 TWISTNBQ3B726 338 aaPredicted RBP7.87□□□□□ -1.15
SCN2A-216ENST00000637367 SASS6Q6UVJ0 657 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 THUMPD2Q9BTF0 503 aaKnown RBP7.87□□□□□ -1.15
SCN2A-216ENST00000637367 EID1Q9Y6B2 187 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 CUX1P39880 1505 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 APPP05067 770 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 TPD52L1Q16890 204 aaPredicted RBP7.87□□□□□ -1.15
SCN2A-216ENST00000637367 ATF7IPQ6VMQ6 1270 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 PRXQ9BXM0 1461 aa7.87□□□□□ -1.15
SCN2A-216ENST00000637367 CEBPZQ03701 1054 aaKnown RBP7.86□□□□□ -1.15
SCN2A-216ENST00000637367 NAIPQ13075 1403 aa7.86□□□□□ -1.15
SCN2A-216ENST00000637367 MVPQ14764 893 aaKnown RBP7.86□□□□□ -1.15
SCN2A-216ENST00000637367 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
SCN2A-216ENST00000637367 SLFN5Q08AF3 891 aa7.86□□□□□ -1.15
SCN2A-216ENST00000637367 NEXNQ0ZGT2 675 aa7.86□□□□□ -1.15
SCN2A-216ENST00000637367 G3BP1Q13283 466 aaKnown RBP eCLIP7.86□□□□□ -1.15
SCN2A-216ENST00000637367 PKNOX2Q96KN3 472 aa7.86□□□□□ -1.15
SCN2A-216ENST00000637367 TRIM5Q9C035 493 aa7.86□□□□□ -1.15
SCN2A-216ENST00000637367 MAP4K4O95819 1239 aaPredicted RBP7.85□□□□□ -1.15
SCN2A-216ENST00000637367 UBTFL1P0CB47 393 aaPredicted RBP7.85□□□□□ -1.15
SCN2A-216ENST00000637367 KIAA1107Q9UPP5 1409 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 K7ELQ4 463 aaPredicted RBP7.85□□□□□ -1.15
SCN2A-216ENST00000637367 WWC1Q8IX03 1113 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 NEUROD6Q96NK8 337 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 SDF4Q9BRK5 362 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 RABEP1Q15276 862 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 CCDC73Q6ZRK6 1079 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 TMEM57Q8N5G2 664 aa7.85□□□□□ -1.15
SCN2A-216ENST00000637367 PRDM2Q13029 1718 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 PRG4Q92954 1404 aaPredicted RBP7.84□□□□□ -1.15
SCN2A-216ENST00000637367 SLC4A2P04920 1241 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 GTF2E1P29083 439 aaPredicted RBP7.84□□□□□ -1.15
SCN2A-216ENST00000637367 AAMPQ13685 434 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 RNF20Q5VTR2 975 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 CHD1LQ86WJ1 897 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 ROCK1Q13464 1354 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 MBD3O95983 291 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 CCDC173Q0VFZ6 552 aa7.84□□□□□ -1.15
SCN2A-216ENST00000637367 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 TBC1D2Q9BYX2 928 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 TSPY26PQ9H489 355 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 CPLX2Q6PUV4 134 aaKnown RBP7.83□□□□□ -1.16
SCN2A-216ENST00000637367 PRAM1Q96QH2 718 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 UPF3BQ9BZI7 483 aaKnown RBP7.83□□□□□ -1.16
SCN2A-216ENST00000637367 IL1RAPL2Q9NP60 686 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 SULT6B1Q6IMI4 303 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 STK11IPQ8N1F8 1099 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 TIAM1Q13009 1591 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 STK3Q13188 491 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 FSD1Q9BTV5 496 aa7.83□□□□□ -1.16
SCN2A-216ENST00000637367 ERICH3Q5RHP9 1530 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 AKAP17AQ02040 695 aaKnown RBP7.82□□□□□ -1.16
SCN2A-216ENST00000637367 TTLL5Q6EMB2 1281 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 CLASRPQ8N2M8 674 aaKnown RBP7.82□□□□□ -1.16
SCN2A-216ENST00000637367 CABP1Q9NZU7 370 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 SYCE3A1L190 88 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 NLRP6P59044 892 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 TTC5Q8N0Z6 440 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 MNS1Q8NEH6 495 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 GCC1Q96CN9 775 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 UQCRHLA0A096LP55 91 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 MARCH6O60337 910 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 UQCRHP07919 91 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 TPM2P07951 284 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 CYB5RLQ6IPT4 315 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 DDX54Q8TDD1 881 aaKnown RBP7.82□□□□□ -1.16
SCN2A-216ENST00000637367 SSH1Q8WYL5 1049 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 EXOC6BQ9Y2D4 811 aa7.82□□□□□ -1.16
SCN2A-216ENST00000637367 ERC2O15083 957 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 TSR1Q2NL82 804 aaKnown RBP7.81□□□□□ -1.16
SCN2A-216ENST00000637367 ERBINQ96RT1 1412 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 TRIM29Q14134 588 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 WASHC4Q2M389 1173 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 VPS53Q5VIR6 699 aa7.81□□□□□ -1.16
SCN2A-216ENST00000637367 RIC3Q7Z5B4 369 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms