RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 SCAF11Q99590 1463 aaKnown RBP10.91□□□□□ -0.66
GABRA1-216ENST00000637044 FOXO3O43524 673 aa10.91□□□□□ -0.66
GABRA1-216ENST00000637044 C19orf44Q9H6X5 657 aa10.91□□□□□ -0.66
GABRA1-216ENST00000637044 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
GABRA1-216ENST00000637044 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
GABRA1-216ENST00000637044 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
GABRA1-216ENST00000637044 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
GABRA1-216ENST00000637044 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
GABRA1-216ENST00000637044 PTPRMP28827 1452 aa10.91□□□□□ -0.66
GABRA1-216ENST00000637044 TET3O43151 1660 aa10.9□□□□□ -0.66
GABRA1-216ENST00000637044 ANP32AP39687 249 aaKnown RBP10.9□□□□□ -0.66
GABRA1-216ENST00000637044 GGNBP2Q9H3C7 697 aa10.9□□□□□ -0.66
GABRA1-216ENST00000637044 KIF13AQ9H1H9 1805 aa10.9□□□□□ -0.67
GABRA1-216ENST00000637044 MS4A1P11836 297 aa10.89□□□□□ -0.67
GABRA1-216ENST00000637044 EVA1CP58658 441 aa10.89□□□□□ -0.67
GABRA1-216ENST00000637044 NPHP4O75161 1426 aaPredicted RBP10.89□□□□□ -0.67
GABRA1-216ENST00000637044 RALGAPBQ86X10 1494 aa10.89□□□□□ -0.67
GABRA1-216ENST00000637044 NGEFQ8N5V2 710 aa10.89□□□□□ -0.67
GABRA1-216ENST00000637044 TRPM2O94759 1503 aa10.88□□□□□ -0.67
GABRA1-216ENST00000637044 IQGAP3Q86VI3 1631 aa10.88□□□□□ -0.67
GABRA1-216ENST00000637044 A2ML1A8K2U0 1454 aa10.88□□□□□ -0.67
GABRA1-216ENST00000637044 PLA2R1Q13018 1463 aa10.88□□□□□ -0.67
GABRA1-216ENST00000637044 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
GABRA1-216ENST00000637044 RICTORQ6R327 1708 aa10.88□□□□□ -0.67
GABRA1-216ENST00000637044 UNC13BO14795 1591 aa10.87□□□□□ -0.67
GABRA1-216ENST00000637044 YTHDC2Q9H6S0 1430 aaKnown RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 LRPPRCP42704 1394 aaKnown RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 PLEKHG1Q9ULL1 1385 aa10.87□□□□□ -0.67
GABRA1-216ENST00000637044 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
GABRA1-216ENST00000637044 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 RCAN3Q9UKA8 241 aa10.87□□□□□ -0.67
GABRA1-216ENST00000637044 CLTCQ00610 1675 aaKnown RBP10.87□□□□□ -0.67
GABRA1-216ENST00000637044 LMTK2Q8IWU2 1503 aa10.86□□□□□ -0.67
GABRA1-216ENST00000637044 FTSJ3Q8IY81 847 aaKnown RBP10.86□□□□□ -0.67
GABRA1-216ENST00000637044 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
GABRA1-216ENST00000637044 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
GABRA1-216ENST00000637044 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
GABRA1-216ENST00000637044 NPM2Q86SE8 214 aaKnown RBP10.85□□□□□ -0.67
GABRA1-216ENST00000637044 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
GABRA1-216ENST00000637044 CEP152O94986 1710 aa10.84□□□□□ -0.67
GABRA1-216ENST00000637044 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
GABRA1-216ENST00000637044 FRMPD1Q5SYB0 1578 aa10.84□□□□□ -0.67
GABRA1-216ENST00000637044 KRT28Q7Z3Y7 464 aa10.84□□□□□ -0.67
GABRA1-216ENST00000637044 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
GABRA1-216ENST00000637044 RIMS1Q86UR5 1692 aaKnown RBP10.83□□□□□ -0.68
GABRA1-216ENST00000637044 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
GABRA1-216ENST00000637044 METP08581 1390 aa10.83□□□□□ -0.68
GABRA1-216ENST00000637044 ABCC11Q96J66 1382 aa10.83□□□□□ -0.68
GABRA1-216ENST00000637044 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
GABRA1-216ENST00000637044 FRAT1Q92837 279 aaPredicted RBP10.82□□□□□ -0.68
GABRA1-216ENST00000637044 RNF17Q9BXT8 1623 aaKnown RBP10.82□□□□□ -0.68
GABRA1-216ENST00000637044 CCDC146Q8IYE0 955 aa10.82□□□□□ -0.68
GABRA1-216ENST00000637044 PRDM11Q9NQV5 511 aa10.82□□□□□ -0.68
GABRA1-216ENST00000637044 NPHP3Q7Z494 1330 aa10.82□□□□□ -0.68
GABRA1-216ENST00000637044 CAMSAP1Q5T5Y3 1602 aa10.82□□□□□ -0.68
GABRA1-216ENST00000637044 BCL11AQ9H165 835 aa10.82□□□□□ -0.68
GABRA1-216ENST00000637044 ACEP12821 1306 aa10.81□□□□□ -0.68
GABRA1-216ENST00000637044 LMOD3Q0VAK6 560 aa10.81□□□□□ -0.68
GABRA1-216ENST00000637044 SETD1BQ9UPS6 1966 aaKnown RBP10.81□□□□□ -0.68
GABRA1-216ENST00000637044 PPRC1Q5VV67 1664 aaKnown RBP10.81□□□□□ -0.68
GABRA1-216ENST00000637044 RTF1Q92541 710 aaKnown RBP10.81□□□□□ -0.68
GABRA1-216ENST00000637044 TMEM94Q12767 1356 aa10.81□□□□□ -0.68
GABRA1-216ENST00000637044 MADDQ8WXG6 1647 aa10.8□□□□□ -0.68
GABRA1-216ENST00000637044 PPP2R1AP30153 589 aa10.8□□□□□ -0.68
GABRA1-216ENST00000637044 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
GABRA1-216ENST00000637044 NLRP2Q9NX02 1062 aa10.8□□□□□ -0.68
GABRA1-216ENST00000637044 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
GABRA1-216ENST00000637044 B4GALNT3Q6L9W6 998 aa10.79□□□□□ -0.68
GABRA1-216ENST00000637044 SIRT1Q96EB6 747 aa10.79□□□□□ -0.68
GABRA1-216ENST00000637044 KIF1BO60333 1816 aa10.79□□□□□ -0.68
GABRA1-216ENST00000637044 REREQ9P2R6 1566 aa10.79□□□□□ -0.68
GABRA1-216ENST00000637044 DIAPH1O60610 1272 aaKnown RBP10.79□□□□□ -0.68
GABRA1-216ENST00000637044 STRN4Q9NRL3 753 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 USP35Q9P2H5 1018 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 E9PSI1 815 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
GABRA1-216ENST00000637044 PHF23Q9BUL5 403 aaPredicted RBP10.78□□□□□ -0.68
GABRA1-216ENST00000637044 E9PCH4 1651 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 PIK3R4Q99570 1358 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 DISP3Q9P2K9 1392 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 APAF1O14727 1248 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
GABRA1-216ENST00000637044 ADAMTS2O95450 1211 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 TESK2Q96S53 571 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 ORAI2Q96SN7 254 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 ADGRB3O60242 1522 aa10.78□□□□□ -0.68
GABRA1-216ENST00000637044 ZC3H13Q5T200 1668 aaKnown RBP10.78□□□□□ -0.68
GABRA1-216ENST00000637044 MTHFSP49914 203 aa10.77□□□□□ -0.68
GABRA1-216ENST00000637044 NME9Q86XW9 330 aa10.77□□□□□ -0.68
GABRA1-216ENST00000637044 KCNH5Q8NCM2 988 aa10.77□□□□□ -0.68
GABRA1-216ENST00000637044 NSD3Q9BZ95 1437 aa10.77□□□□□ -0.69
GABRA1-216ENST00000637044 FER1L4A9Z1Z3 1794 aa10.77□□□□□ -0.69
GABRA1-216ENST00000637044 MYOM2P54296 1465 aa10.77□□□□□ -0.69
GABRA1-216ENST00000637044 SPHKAPQ2M3C7 1700 aa10.77□□□□□ -0.69
GABRA1-216ENST00000637044 ZFYVE9O95405 1425 aa10.77□□□□□ -0.69
GABRA1-216ENST00000637044 RUNDC1Q96C34 613 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms