RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
PNKP-226ENST00000636840 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.65□□□□□ -0.54
PNKP-226ENST00000636840 MINK1Q8N4C8 1332 aaPredicted RBP11.64□□□□□ -0.55
PNKP-226ENST00000636840 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
PNKP-226ENST00000636840 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
PNKP-226ENST00000636840 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
PNKP-226ENST00000636840 DLC1Q96QB1 1528 aa11.64□□□□□ -0.55
PNKP-226ENST00000636840 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
PNKP-226ENST00000636840 KIAA1210Q9ULL0 1709 aa11.63□□□□□ -0.55
PNKP-226ENST00000636840 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
PNKP-226ENST00000636840 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
PNKP-226ENST00000636840 EIF3AQ14152 1382 aaKnown RBP11.63□□□□□ -0.55
PNKP-226ENST00000636840 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
PNKP-226ENST00000636840 ASXL1Q8IXJ9 1541 aa11.62□□□□□ -0.55
PNKP-226ENST00000636840 WASLO00401 505 aaPredicted RBP11.62□□□□□ -0.55
PNKP-226ENST00000636840 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
PNKP-226ENST00000636840 KNDC1Q76NI1 1749 aa11.61□□□□□ -0.55
PNKP-226ENST00000636840 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
PNKP-226ENST00000636840 C1orf167Q5SNV9 1468 aa11.61□□□□□ -0.55
PNKP-226ENST00000636840 MST1RQ04912 1400 aa11.6□□□□□ -0.55
PNKP-226ENST00000636840 PSME1Q06323 249 aa11.6□□□□□ -0.55
PNKP-226ENST00000636840 CDK19Q9BWU1 502 aa11.6□□□□□ -0.55
PNKP-226ENST00000636840 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
PNKP-226ENST00000636840 SRPK2P78362 688 aaKnown RBP11.59□□□□□ -0.55
PNKP-226ENST00000636840 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
PNKP-226ENST00000636840 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
PNKP-226ENST00000636840 GPRASP1Q5JY77 1395 aa11.58□□□□□ -0.56
PNKP-226ENST00000636840 FOXO3O43524 673 aa11.58□□□□□ -0.56
PNKP-226ENST00000636840 ROBO1Q9Y6N7 1651 aa11.58□□□□□ -0.56
PNKP-226ENST00000636840 NGDNQ8NEJ9 315 aaKnown RBP11.57□□□□□ -0.56
PNKP-226ENST00000636840 NUDT16Q96DE0 195 aaKnown RBP11.57□□□□□ -0.56
PNKP-226ENST00000636840 CCDC61Q9Y6R9 512 aa11.57□□□□□ -0.56
PNKP-226ENST00000636840 CDC42BPGQ6DT37 1551 aa11.57□□□□□ -0.56
PNKP-226ENST00000636840 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
PNKP-226ENST00000636840 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
PNKP-226ENST00000636840 PMFBP1Q8TBY8 1022 aa11.56□□□□□ -0.56
PNKP-226ENST00000636840 JCADQ9P266 1359 aa11.55□□□□□ -0.56
PNKP-226ENST00000636840 ANKARQ7Z5J8 1434 aa11.55□□□□□ -0.56
PNKP-226ENST00000636840 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
PNKP-226ENST00000636840 RALGAPBQ86X10 1494 aa11.55□□□□□ -0.56
PNKP-226ENST00000636840 DDX17Q92841 729 aaKnown RBP11.54□□□□□ -0.56
PNKP-226ENST00000636840 SOS2Q07890 1332 aaPredicted RBP11.54□□□□□ -0.56
PNKP-226ENST00000636840 ST20-MTHFSA0A0A6YYL1 179 aa11.53□□□□□ -0.56
PNKP-226ENST00000636840 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
PNKP-226ENST00000636840 SPATA31A6Q5VVP1 1343 aa11.53□□□□□ -0.56
PNKP-226ENST00000636840 PHLPP1O60346 1717 aa11.52□□□□□ -0.56
PNKP-226ENST00000636840 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.56
PNKP-226ENST00000636840 CDCA8Q53HL2 280 aa11.52□□□□□ -0.57
PNKP-226ENST00000636840 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
PNKP-226ENST00000636840 LMOD2Q6P5Q4 547 aa11.52□□□□□ -0.57
PNKP-226ENST00000636840 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
PNKP-226ENST00000636840 AHDC1Q5TGY3 1603 aaPredicted RBP11.51□□□□□ -0.57
PNKP-226ENST00000636840 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
PNKP-226ENST00000636840 EIF4G2P78344 907 aaKnown RBP eCLIP11.51□□□□□ -0.57
PNKP-226ENST00000636840 TMF1P82094 1093 aa11.51□□□□□ -0.57
PNKP-226ENST00000636840 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
PNKP-226ENST00000636840 PUS7Q96PZ0 661 aaKnown RBP11.51□□□□□ -0.57
PNKP-226ENST00000636840 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
PNKP-226ENST00000636840 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
PNKP-226ENST00000636840 ADGRB2O60241 1585 aa11.5□□□□□ -0.57
PNKP-226ENST00000636840 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
PNKP-226ENST00000636840 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
PNKP-226ENST00000636840 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
PNKP-226ENST00000636840 HAP1P54257 671 aaPredicted RBP11.5□□□□□ -0.57
PNKP-226ENST00000636840 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
PNKP-226ENST00000636840 CABP1Q9NZU7 370 aa11.5□□□□□ -0.57
PNKP-226ENST00000636840 PRR36Q9H6K5 1346 aa11.5□□□□□ -0.57
PNKP-226ENST00000636840 SBNO2Q9Y2G9 1366 aa11.5□□□□□ -0.57
PNKP-226ENST00000636840 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
PNKP-226ENST00000636840 ACEP12821 1306 aa11.49□□□□□ -0.57
PNKP-226ENST00000636840 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
PNKP-226ENST00000636840 DISP3Q9P2K9 1392 aa11.49□□□□□ -0.57
PNKP-226ENST00000636840 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
PNKP-226ENST00000636840 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
PNKP-226ENST00000636840 USP47Q96K76 1375 aa11.48□□□□□ -0.57
PNKP-226ENST00000636840 KIF1AQ12756 1690 aa11.47□□□□□ -0.57
PNKP-226ENST00000636840 SBNO1A3KN83 1393 aa11.47□□□□□ -0.57
PNKP-226ENST00000636840 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
PNKP-226ENST00000636840 HDGFL2Q7Z4V5 671 aaPredicted RBP11.46□□□□□ -0.57
PNKP-226ENST00000636840 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.57
PNKP-226ENST00000636840 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.58
PNKP-226ENST00000636840 COL16A1Q07092 1604 aaPredicted RBP11.46□□□□□ -0.58
PNKP-226ENST00000636840 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.58
PNKP-226ENST00000636840 PPIP5K1Q6PFW1 1433 aa11.45□□□□□ -0.58
PNKP-226ENST00000636840 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
PNKP-226ENST00000636840 PNPLA6Q8IY17 1366 aa11.45□□□□□ -0.58
PNKP-226ENST00000636840 TESK2Q96S53 571 aa11.45□□□□□ -0.58
PNKP-226ENST00000636840 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
PNKP-226ENST00000636840 ATP7BP35670 1465 aa11.44□□□□□ -0.58
PNKP-226ENST00000636840 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
PNKP-226ENST00000636840 ABTB2Q8N961 1025 aa11.44□□□□□ -0.58
PNKP-226ENST00000636840 NGLY1Q96IV0 654 aa11.44□□□□□ -0.58
PNKP-226ENST00000636840 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
PNKP-226ENST00000636840 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
PNKP-226ENST00000636840 ADAMTS2O95450 1211 aa11.43□□□□□ -0.58
PNKP-226ENST00000636840 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
PNKP-226ENST00000636840 ZNF772Q68DY9 489 aaPredicted RBP11.43□□□□□ -0.58
PNKP-226ENST00000636840 SLC12A5Q9H2X9 1139 aa11.43□□□□□ -0.58
PNKP-226ENST00000636840 PXDNQ92626 1479 aa11.43□□□□□ -0.58
PNKP-226ENST00000636840 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms