RNA–Protein interactions for RNA: ENST00000636292.1

CHRNA7-213, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 4,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-213ENST00000636292 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
CHRNA7-213ENST00000636292 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 GAS2L2Q8NHY3 880 aa17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
CHRNA7-213ENST00000636292 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
CHRNA7-213ENST00000636292 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
CHRNA7-213ENST00000636292 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
CHRNA7-213ENST00000636292 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
CHRNA7-213ENST00000636292 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 TPRNQ4KMQ1 711 aa17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 SMG6Q86US8 1419 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 C14orf93Q9H972 538 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-213ENST00000636292 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.31
CHRNA7-213ENST00000636292 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
CHRNA7-213ENST00000636292 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
CHRNA7-213ENST00000636292 HSCBQ8IWL3 235 aa17■□□□□ 0.31
CHRNA7-213ENST00000636292 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
CHRNA7-213ENST00000636292 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 G3V3G9 751 aa16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 DZIP1LQ8IYY4 767 aaKnown RBP16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
CHRNA7-213ENST00000636292 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
CHRNA7-213ENST00000636292 FOXO3O43524 673 aa16.98■□□□□ 0.31
CHRNA7-213ENST00000636292 PHF8Q9UPP1 1060 aa16.98■□□□□ 0.31
CHRNA7-213ENST00000636292 UHRF1BP1LA0JNW5 1464 aa16.98■□□□□ 0.31
CHRNA7-213ENST00000636292 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
CHRNA7-213ENST00000636292 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
CHRNA7-213ENST00000636292 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
CHRNA7-213ENST00000636292 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
CHRNA7-213ENST00000636292 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
CHRNA7-213ENST00000636292 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
CHRNA7-213ENST00000636292 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-213ENST00000636292 ANKRD45Q5TZF3 282 aa16.95■□□□□ 0.3
CHRNA7-213ENST00000636292 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-213ENST00000636292 C11orf95C9JLR9 678 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-213ENST00000636292 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
CHRNA7-213ENST00000636292 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-213ENST00000636292 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-213ENST00000636292 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
CHRNA7-213ENST00000636292 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
CHRNA7-213ENST00000636292 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
CHRNA7-213ENST00000636292 MFAP1P55081 439 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-213ENST00000636292 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
CHRNA7-213ENST00000636292 NME9Q86XW9 330 aa16.93■□□□□ 0.3
CHRNA7-213ENST00000636292 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-213ENST00000636292 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-213ENST00000636292 SPRYD3Q8NCJ5 442 aa16.91■□□□□ 0.3
CHRNA7-213ENST00000636292 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
CHRNA7-213ENST00000636292 SHANK2Q9UPX8 1470 aa16.91■□□□□ 0.3
CHRNA7-213ENST00000636292 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
CHRNA7-213ENST00000636292 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
CHRNA7-213ENST00000636292 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
CHRNA7-213ENST00000636292 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
CHRNA7-213ENST00000636292 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
CHRNA7-213ENST00000636292 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
CHRNA7-213ENST00000636292 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
CHRNA7-213ENST00000636292 FCHSD2O94868 740 aa16.88■□□□□ 0.29
CHRNA7-213ENST00000636292 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
CHRNA7-213ENST00000636292 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
CHRNA7-213ENST00000636292 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
CHRNA7-213ENST00000636292 CABP4P57796 275 aa16.87■□□□□ 0.29
CHRNA7-213ENST00000636292 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
CHRNA7-213ENST00000636292 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
CHRNA7-213ENST00000636292 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
CHRNA7-213ENST00000636292 PANK1Q8TE04 598 aa16.86■□□□□ 0.29
CHRNA7-213ENST00000636292 HSPA2P54652 639 aa16.85■□□□□ 0.29
CHRNA7-213ENST00000636292 GOLGA6L4A6NEF3 574 aa16.85■□□□□ 0.29
CHRNA7-213ENST00000636292 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHRNA7-213ENST00000636292 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
CHRNA7-213ENST00000636292 ATP10AO60312 1499 aa16.84■□□□□ 0.29
CHRNA7-213ENST00000636292 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
CHRNA7-213ENST00000636292 EMILIN1Q9Y6C2 1016 aa16.84■□□□□ 0.29
CHRNA7-213ENST00000636292 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
CHRNA7-213ENST00000636292 ACEP12821 1306 aa16.83■□□□□ 0.28
CHRNA7-213ENST00000636292 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 ATP7AQ04656 1500 aa16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 GNL2Q13823 731 aaKnown RBP16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 WDR63Q8IWG1 891 aa16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 DISP3Q9P2K9 1392 aa16.82■□□□□ 0.28
CHRNA7-213ENST00000636292 LRPPRCP42704 1394 aaKnown RBP16.81■□□□□ 0.28
CHRNA7-213ENST00000636292 TULP1O00294 542 aaPredicted RBP16.81■□□□□ 0.28
CHRNA7-213ENST00000636292 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
CHRNA7-213ENST00000636292 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
CHRNA7-213ENST00000636292 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
CHRNA7-213ENST00000636292 NEO1Q92859 1461 aa16.8■□□□□ 0.28
CHRNA7-213ENST00000636292 MSH6P52701 1360 aa16.8■□□□□ 0.28
CHRNA7-213ENST00000636292 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms