RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 NCOA1Q15788 1441 aa7.96□□□□□ -1.14
PDE4D-228ENST00000636120 ATP6V1DQ9Y5K8 247 aa7.96□□□□□ -1.14
PDE4D-228ENST00000636120 MTHFSP49914 203 aa7.96□□□□□ -1.14
PDE4D-228ENST00000636120 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
PDE4D-228ENST00000636120 TXNDC2Q86VQ3 553 aa7.96□□□□□ -1.14
PDE4D-228ENST00000636120 RPRD2Q5VT52 1461 aaKnown RBP7.95□□□□□ -1.14
PDE4D-228ENST00000636120 ELL2O00472 640 aaPredicted RBP7.95□□□□□ -1.14
PDE4D-228ENST00000636120 PPP6R1Q9UPN7 881 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 CDK19Q9BWU1 502 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 WDR63Q8IWG1 891 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 RAPGEF4Q8WZA2 1011 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 RILPL2Q969X0 211 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 TCOF1Q13428 1488 aaKnown RBP7.95□□□□□ -1.14
PDE4D-228ENST00000636120 FANCAO15360 1455 aa7.95□□□□□ -1.14
PDE4D-228ENST00000636120 DIAPH3Q9NSV4 1193 aa7.94□□□□□ -1.14
PDE4D-228ENST00000636120 EIF2AK4Q9P2K8 1649 aaKnown RBP7.94□□□□□ -1.14
PDE4D-228ENST00000636120 INTS3Q68E01 1043 aaKnown RBP7.94□□□□□ -1.14
PDE4D-228ENST00000636120 WDR62O43379 1518 aa7.94□□□□□ -1.14
PDE4D-228ENST00000636120 GPATCH8Q9UKJ3 1502 aaKnown RBP7.94□□□□□ -1.14
PDE4D-228ENST00000636120 IFIT2P09913 472 aaKnown RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 EIF2S2P20042 333 aaKnown RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 FKBP5Q13451 457 aaPredicted RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 ERC2O15083 957 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 CCDC30Q5VVM6 783 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 HMOX1P09601 288 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 GTF2E1P29083 439 aaPredicted RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 TCP11L2Q8N4U5 519 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 DENND4BO75064 1496 aaPredicted RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 G3V3G9 751 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 DCAF8Q5TAQ9 597 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
PDE4D-228ENST00000636120 ISY1Q9ULR0 285 aaKnown RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 PLEKHO1Q53GL0 409 aaPredicted RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 G3BP1Q13283 466 aaKnown RBP eCLIP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 PNISRQ8TF01 805 aaKnown RBP7.93□□□□□ -1.14
PDE4D-228ENST00000636120 NLRP6P59044 892 aa7.92□□□□□ -1.14
PDE4D-228ENST00000636120 SCAF11Q99590 1463 aaKnown RBP7.92□□□□□ -1.14
PDE4D-228ENST00000636120 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
PDE4D-228ENST00000636120 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
PDE4D-228ENST00000636120 SHANK2Q9UPX8 1470 aa7.92□□□□□ -1.14
PDE4D-228ENST00000636120 EIF4G3O43432 1585 aaKnown RBP7.91□□□□□ -1.14
PDE4D-228ENST00000636120 ABTB2Q8N961 1025 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 GNAI3P08754 354 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 NSD2O96028 1365 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 H3BQV1 296 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 FRAT2O75474 233 aaPredicted RBP7.91□□□□□ -1.14
PDE4D-228ENST00000636120 IFFO2Q5TF58 517 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 AMOTL1Q8IY63 956 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 PLCH2O75038 1416 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 NSD3Q9BZ95 1437 aa7.91□□□□□ -1.14
PDE4D-228ENST00000636120 NUP153P49790 1475 aaKnown RBP7.91□□□□□ -1.14
PDE4D-228ENST00000636120 NUP160Q12769 1436 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 GCC1Q96CN9 775 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 PRKAR2BP31323 418 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 FAM184AQ8NB25 1140 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 ZNF428Q96B54 188 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 DHX29Q7Z478 1369 aaKnown RBP7.9□□□□□ -1.14
PDE4D-228ENST00000636120 CDC45O75419 566 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 RAPGEF3O95398 923 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 SYNE3Q6ZMZ3 975 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 TEX14Q8IWB6 1497 aa7.9□□□□□ -1.14
PDE4D-228ENST00000636120 UBTFL1P0CB47 393 aaPredicted RBP7.9□□□□□ -1.15
PDE4D-228ENST00000636120 ANKLE2Q86XL3 938 aa7.9□□□□□ -1.15
PDE4D-228ENST00000636120 NOL10Q9BSC4 688 aaKnown RBP7.9□□□□□ -1.15
PDE4D-228ENST00000636120 GZF1Q9H116 711 aaPredicted RBP7.9□□□□□ -1.15
PDE4D-228ENST00000636120 ABCA5Q8WWZ7 1642 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 ESCO1Q5FWF5 840 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 RIC3Q7Z5B4 369 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 CABP1Q9NZU7 370 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 ATP10BO94823 1461 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 KDM5BQ9UGL1 1544 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 RALGAPBQ86X10 1494 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 TULP1O00294 542 aaPredicted RBP7.89□□□□□ -1.15
PDE4D-228ENST00000636120 SLC12A5Q9H2X9 1139 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 CPLX2Q6PUV4 134 aaKnown RBP7.89□□□□□ -1.15
PDE4D-228ENST00000636120 ERC1Q8IUD2 1116 aa7.89□□□□□ -1.15
PDE4D-228ENST00000636120 FCHSD2O94868 740 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 NOL8Q76FK4 1167 aaKnown RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 PANK1Q8TE04 598 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 ANO2Q9NQ90 1003 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 CHMP5Q9NZZ3 219 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 DNMT1P26358 1616 aaKnown RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 PROSER2Q86WR7 435 aaPredicted RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 AKAP17AQ02040 695 aaKnown RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 TOMM22Q9NS69 142 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 FOXD4L1Q9NU39 408 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 WDR7Q9Y4E6 1490 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 SYCP2Q9BX26 1530 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 HIP1O00291 1037 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 CCT4P50991 539 aaKnown RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 SF3A1Q15459 793 aaKnown RBP7.88□□□□□ -1.15
PDE4D-228ENST00000636120 NLRP2Q9NX02 1062 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 ABCC11Q96J66 1382 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 NUCB2P80303 420 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 CNTROBQ8N137 903 aa7.88□□□□□ -1.15
PDE4D-228ENST00000636120 ZNF518AQ6AHZ1 1483 aa7.87□□□□□ -1.15
PDE4D-228ENST00000636120 EXOSC9Q06265 439 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms