RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	MEX3C	Q5U5Q3	659 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-222	ENST00000636022	PNPLA6	Q8IY17	1366 aa		10.86	□□□□□ -0.67
CACNA1A-222	ENST00000636022	KNDC1	Q76NI1	1749 aa		10.86	□□□□□ -0.67
CACNA1A-222	ENST00000636022	SOS2	Q07890	1332 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-222	ENST00000636022	ZNF772	Q68DY9	489 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-222	ENST00000636022	TMEM132E	Q6IEE7	984 aa		10.85	□□□□□ -0.67
CACNA1A-222	ENST00000636022	WAPL	Q7Z5K2	1190 aa		10.85	□□□□□ -0.67
CACNA1A-222	ENST00000636022	STK26	Q9P289	416 aa		10.85	□□□□□ -0.67
CACNA1A-222	ENST00000636022	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	NUTM2E	B1AL46	878 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	PPP4R3CP	Q6ZMV5	832 aa		10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	C14orf93	Q9H972	538 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	PLEKHH1	Q9ULM0	1364 aa		10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	MYOM2	P54296	1465 aa		10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-222	ENST00000636022	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.83	□□□□□ -0.68
CACNA1A-222	ENST00000636022	SIRT1	Q96EB6	747 aa		10.83	□□□□□ -0.68
CACNA1A-222	ENST00000636022	HRC	P23327	699 aa		10.82	□□□□□ -0.68
CACNA1A-222	ENST00000636022	CFAP70	Q5T0N1	1121 aa		10.82	□□□□□ -0.68
CACNA1A-222	ENST00000636022	AFF2	P51816	1311 aa		10.82	□□□□□ -0.68
CACNA1A-222	ENST00000636022	PXDN	Q92626	1479 aa		10.81	□□□□□ -0.68
CACNA1A-222	ENST00000636022	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNA1A-222	ENST00000636022	ESCO1	Q5FWF5	840 aa		10.8	□□□□□ -0.68
CACNA1A-222	ENST00000636022	C8orf37	Q96NL8	207 aa		10.8	□□□□□ -0.68
CACNA1A-222	ENST00000636022	FMN2	Q9NZ56	1722 aa		10.8	□□□□□ -0.68
CACNA1A-222	ENST00000636022	EP400	Q96L91	3159 aa		10.79	□□□□□ -0.68
CACNA1A-222	ENST00000636022	DHX57	Q6P158	1386 aa	Known RBP	10.79	□□□□□ -0.68
CACNA1A-222	ENST00000636022	RXRB	P28702	533 aa		10.79	□□□□□ -0.68
CACNA1A-222	ENST00000636022	NPHP3	Q7Z494	1330 aa		10.79	□□□□□ -0.68
CACNA1A-222	ENST00000636022	ADGRB1	O14514	1584 aa		10.78	□□□□□ -0.68
CACNA1A-222	ENST00000636022	NUTM2F	A1L443	756 aa		10.78	□□□□□ -0.68
CACNA1A-222	ENST00000636022	FOXO3	O43524	673 aa		10.78	□□□□□ -0.68
CACNA1A-222	ENST00000636022	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-222	ENST00000636022	RGPD8	O14715	1765 aa	Predicted RBP	10.77	□□□□□ -0.68
CACNA1A-222	ENST00000636022	ADAMTS2	O95450	1211 aa		10.77	□□□□□ -0.69
CACNA1A-222	ENST00000636022	QTRT2	Q9H974	415 aa	Known RBP	10.77	□□□□□ -0.69
CACNA1A-222	ENST00000636022	SRCAP	Q6ZRS2	3230 aa		10.77	□□□□□ -0.69
CACNA1A-222	ENST00000636022	DLC1	Q96QB1	1528 aa		10.77	□□□□□ -0.69
CACNA1A-222	ENST00000636022	XPC	Q01831	940 aa	Predicted RBP	10.76	□□□□□ -0.69
CACNA1A-222	ENST00000636022	NGLY1	Q96IV0	654 aa		10.76	□□□□□ -0.69
CACNA1A-222	ENST00000636022	PRAM1	Q96QH2	718 aa		10.76	□□□□□ -0.69
CACNA1A-222	ENST00000636022	KIF1A	Q12756	1690 aa		10.76	□□□□□ -0.69
CACNA1A-222	ENST00000636022	RBM6	P78332	1123 aa	Known RBP	10.75	□□□□□ -0.69
CACNA1A-222	ENST00000636022	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.75	□□□□□ -0.69
CACNA1A-222	ENST00000636022	DCAF11	Q8TEB1	546 aa		10.75	□□□□□ -0.69
CACNA1A-222	ENST00000636022	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	STAC3	Q96MF2	364 aa		10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	KDM2A	Q9Y2K7	1162 aa		10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	MARF1	Q9Y4F3	1742 aa	Known RBP	10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	SPATA31A3	Q5VYP0	1347 aa		10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	RGS12	O14924	1447 aa		10.74	□□□□□ -0.69
CACNA1A-222	ENST00000636022	ADGRB2	O60241	1585 aa		10.73	□□□□□ -0.69
CACNA1A-222	ENST00000636022	USP32	Q8NFA0	1604 aa		10.73	□□□□□ -0.69
CACNA1A-222	ENST00000636022	USP21	Q9UK80	565 aa		10.73	□□□□□ -0.69
CACNA1A-222	ENST00000636022	PHF8	Q9UPP1	1060 aa		10.73	□□□□□ -0.69
CACNA1A-222	ENST00000636022	KRT28	Q7Z3Y7	464 aa		10.72	□□□□□ -0.69
CACNA1A-222	ENST00000636022	POGK	Q9P215	609 aa		10.72	□□□□□ -0.69
CACNA1A-222	ENST00000636022	TRPC5	Q9UL62	973 aa	Predicted RBP	10.72	□□□□□ -0.69
CACNA1A-222	ENST00000636022	TRAK1	Q9UPV9	953 aa		10.72	□□□□□ -0.69
CACNA1A-222	ENST00000636022	ATRN	O75882	1429 aa		10.72	□□□□□ -0.69
CACNA1A-222	ENST00000636022	BCL9L	Q86UU0	1499 aa		10.72	□□□□□ -0.69
CACNA1A-222	ENST00000636022	ANKAR	Q7Z5J8	1434 aa		10.71	□□□□□ -0.69
CACNA1A-222	ENST00000636022	SBNO1	A3KN83	1393 aa		10.7	□□□□□ -0.7
CACNA1A-222	ENST00000636022	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.7	□□□□□ -0.7
CACNA1A-222	ENST00000636022	TNS3	Q68CZ2	1445 aa		10.69	□□□□□ -0.7
CACNA1A-222	ENST00000636022	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.69	□□□□□ -0.7
CACNA1A-222	ENST00000636022	PRR36	Q9H6K5	1346 aa		10.69	□□□□□ -0.7
CACNA1A-222	ENST00000636022	PSME1	Q06323	249 aa		10.69	□□□□□ -0.7
CACNA1A-222	ENST00000636022	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.69	□□□□□ -0.7
CACNA1A-222	ENST00000636022	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.69	□□□□□ -0.7
CACNA1A-222	ENST00000636022	WASL	O00401	505 aa	Predicted RBP	10.68	□□□□□ -0.7
CACNA1A-222	ENST00000636022	NCBP3	Q53F19	620 aa	Known RBP	10.68	□□□□□ -0.7
CACNA1A-222	ENST00000636022	PMFBP1	Q8TBY8	1022 aa		10.68	□□□□□ -0.7
CACNA1A-222	ENST00000636022	SLIT2	O94813	1529 aa		10.68	□□□□□ -0.7
CACNA1A-222	ENST00000636022	TULP4	Q9NRJ4	1543 aa		10.68	□□□□□ -0.7
CACNA1A-222	ENST00000636022	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.67	□□□□□ -0.7
CACNA1A-222	ENST00000636022	KIAA1210	Q9ULL0	1709 aa		10.67	□□□□□ -0.7
CACNA1A-222	ENST00000636022	CNKSR2	Q8WXI2	1034 aa		10.67	□□□□□ -0.7
CACNA1A-222	ENST00000636022	ABCA3	Q99758	1704 aa		10.67	□□□□□ -0.7
CACNA1A-222	ENST00000636022	ARHGEF10	O15013	1369 aa		10.66	□□□□□ -0.7
CACNA1A-222	ENST00000636022	EIF3A	Q14152	1382 aa	Known RBP	10.66	□□□□□ -0.7
CACNA1A-222	ENST00000636022	UNC5CL	Q8IV45	518 aa		10.66	□□□□□ -0.7
CACNA1A-222	ENST00000636022	CABLES1	Q8TDN4	633 aa		10.66	□□□□□ -0.7
CACNA1A-222	ENST00000636022	GJD4	Q96KN9	370 aa	Predicted RBP	10.66	□□□□□ -0.7
CACNA1A-222	ENST00000636022	ALS2	Q96Q42	1657 aa		10.66	□□□□□ -0.7
CACNA1A-222	ENST00000636022	GLI3	P10071	1580 aa		10.65	□□□□□ -0.71
CACNA1A-222	ENST00000636022	ATP7B	P35670	1465 aa		10.64	□□□□□ -0.71
CACNA1A-222	ENST00000636022	RALGAPB	Q86X10	1494 aa		10.64	□□□□□ -0.71
CACNA1A-222	ENST00000636022	NBPF1	Q3BBV0	1214 aa		10.64	□□□□□ -0.71
CACNA1A-222	ENST00000636022	NWD2	Q9ULI1	1742 aa		10.64	□□□□□ -0.71
CACNA1A-222	ENST00000636022	ATAD2	Q6PL18	1390 aa		10.64	□□□□□ -0.71
CACNA1A-222	ENST00000636022	PLCH1	Q4KWH8	1693 aa		10.63	□□□□□ -0.71
CACNA1A-222	ENST00000636022	FAM83G	A6ND36	823 aa		10.63	□□□□□ -0.71
CACNA1A-222	ENST00000636022	LMOD2	Q6P5Q4	547 aa		10.63	□□□□□ -0.71
CACNA1A-222	ENST00000636022	NUDT16	Q96DE0	195 aa	Known RBP	10.63	□□□□□ -0.71
CACNA1A-222	ENST00000636022	GPRASP1	Q5JY77	1395 aa		10.63	□□□□□ -0.71
CACNA1A-222	ENST00000636022	ITSN1	Q15811	1721 aa		10.62	□□□□□ -0.71
CACNA1A-222	ENST00000636022	VPS72	Q15906	364 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms