RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
CLN6-211ENST00000635754 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
CLN6-211ENST00000635754 TRAK1Q9UPV9 953 aa22.15■■□□□ 1.14
CLN6-211ENST00000635754 TIMELESSQ9UNS1 1208 aa22.14■■□□□ 1.14
CLN6-211ENST00000635754 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.14
CLN6-211ENST00000635754 PRAM1Q96QH2 718 aa22.14■■□□□ 1.13
CLN6-211ENST00000635754 CDC42BPGQ6DT37 1551 aa22.13■■□□□ 1.13
CLN6-211ENST00000635754 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
CLN6-211ENST00000635754 NBPF8Q3BBV2 869 aa22.13■■□□□ 1.13
CLN6-211ENST00000635754 POGKQ9P215 609 aa22.13■■□□□ 1.13
CLN6-211ENST00000635754 RALGAPBQ86X10 1494 aa22.1■■□□□ 1.13
CLN6-211ENST00000635754 ROBO1Q9Y6N7 1651 aa22.1■■□□□ 1.13
CLN6-211ENST00000635754 MSH5O43196 834 aa22.1■■□□□ 1.13
CLN6-211ENST00000635754 SLAIN2Q9P270 581 aa22.1■■□□□ 1.13
CLN6-211ENST00000635754 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLN6-211ENST00000635754 MST1RQ04912 1400 aa22.08■■□□□ 1.13
CLN6-211ENST00000635754 ADGRB2O60241 1585 aa22.07■■□□□ 1.12
CLN6-211ENST00000635754 GPRASP1Q5JY77 1395 aa22.06■■□□□ 1.12
CLN6-211ENST00000635754 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
CLN6-211ENST00000635754 EIF3AQ14152 1382 aaKnown RBP22.03■■□□□ 1.12
CLN6-211ENST00000635754 QRICH2Q9H0J4 1663 aa22.03■■□□□ 1.12
CLN6-211ENST00000635754 CARD11Q9BXL7 1154 aa22.02■■□□□ 1.12
CLN6-211ENST00000635754 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.11
CLN6-211ENST00000635754 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
CLN6-211ENST00000635754 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
CLN6-211ENST00000635754 HIRIP3Q9BW71 556 aaPredicted RBP21.99■■□□□ 1.11
CLN6-211ENST00000635754 HSPA1LP34931 641 aa21.97■■□□□ 1.11
CLN6-211ENST00000635754 BRINP3Q76B58 766 aa21.97■■□□□ 1.11
CLN6-211ENST00000635754 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
CLN6-211ENST00000635754 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
CLN6-211ENST00000635754 NUTM2FA1L443 756 aa21.96■■□□□ 1.11
CLN6-211ENST00000635754 RGPD8O14715 1765 aaPredicted RBP21.95■■□□□ 1.11
CLN6-211ENST00000635754 NHSL1Q5SYE7 1610 aa21.95■■□□□ 1.1
CLN6-211ENST00000635754 TULP4Q9NRJ4 1543 aa21.94■■□□□ 1.1
CLN6-211ENST00000635754 WASLO00401 505 aaPredicted RBP21.94■■□□□ 1.1
CLN6-211ENST00000635754 ANKARQ7Z5J8 1434 aa21.94■■□□□ 1.1
CLN6-211ENST00000635754 USP32Q8NFA0 1604 aa21.93■■□□□ 1.1
CLN6-211ENST00000635754 KIF1AQ12756 1690 aa21.92■■□□□ 1.1
CLN6-211ENST00000635754 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
CLN6-211ENST00000635754 ORAI2Q96SN7 254 aa21.92■■□□□ 1.1
CLN6-211ENST00000635754 COL16A1Q07092 1604 aaPredicted RBP21.9■■□□□ 1.1
CLN6-211ENST00000635754 ITSN1Q15811 1721 aa21.9■■□□□ 1.1
CLN6-211ENST00000635754 CDK19Q9BWU1 502 aa21.88■■□□□ 1.09
CLN6-211ENST00000635754 ATP7BP35670 1465 aa21.87■■□□□ 1.09
CLN6-211ENST00000635754 USP47Q96K76 1375 aa21.87■■□□□ 1.09
CLN6-211ENST00000635754 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
CLN6-211ENST00000635754 EVC2Q86UK5 1308 aa21.85■■□□□ 1.09
CLN6-211ENST00000635754 PRR36Q9H6K5 1346 aa21.85■■□□□ 1.09
CLN6-211ENST00000635754 PHF8Q9UPP1 1060 aa21.85■■□□□ 1.09
CLN6-211ENST00000635754 TOPAZ1Q8N9V7 1692 aa21.85■■□□□ 1.09
CLN6-211ENST00000635754 NPHP3Q7Z494 1330 aa21.84■■□□□ 1.09
CLN6-211ENST00000635754 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
CLN6-211ENST00000635754 DDX17Q92841 729 aaKnown RBP21.83■■□□□ 1.09
CLN6-211ENST00000635754 NUDT16Q96DE0 195 aaKnown RBP21.83■■□□□ 1.09
CLN6-211ENST00000635754 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
CLN6-211ENST00000635754 FOXO3O43524 673 aa21.81■■□□□ 1.08
CLN6-211ENST00000635754 CABP2Q9NPB3 220 aa21.8■■□□□ 1.08
CLN6-211ENST00000635754 PXDNQ92626 1479 aa21.79■■□□□ 1.08
CLN6-211ENST00000635754 SHPRHQ149N8 1683 aa21.79■■□□□ 1.08
CLN6-211ENST00000635754 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
CLN6-211ENST00000635754 JCADQ9P266 1359 aa21.79■■□□□ 1.08
CLN6-211ENST00000635754 PMFBP1Q8TBY8 1022 aa21.79■■□□□ 1.08
CLN6-211ENST00000635754 LRRC59Q96AG4 307 aaKnown RBP21.78■■□□□ 1.08
CLN6-211ENST00000635754 CCDC61Q9Y6R9 512 aa21.78■■□□□ 1.08
CLN6-211ENST00000635754 SLC24A1O60721 1099 aa21.77■■□□□ 1.08
CLN6-211ENST00000635754 XPCQ01831 940 aaPredicted RBP21.76■■□□□ 1.07
CLN6-211ENST00000635754 TESK2Q96S53 571 aa21.76■■□□□ 1.07
CLN6-211ENST00000635754 PPIP5K1Q6PFW1 1433 aa21.76■■□□□ 1.07
CLN6-211ENST00000635754 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
CLN6-211ENST00000635754 ATAD2Q6PL18 1390 aa21.75■■□□□ 1.07
CLN6-211ENST00000635754 PSME1Q06323 249 aa21.73■■□□□ 1.07
CLN6-211ENST00000635754 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
CLN6-211ENST00000635754 EIF4G2P78344 907 aaKnown RBP eCLIP21.72■■□□□ 1.07
CLN6-211ENST00000635754 POLR3AO14802 1390 aaPredicted RBP21.72■■□□□ 1.07
CLN6-211ENST00000635754 PLEKHG3A1L390 1219 aa21.72■■□□□ 1.07
CLN6-211ENST00000635754 PNPLA6Q8IY17 1366 aa21.71■■□□□ 1.07
CLN6-211ENST00000635754 TRPM3Q9HCF6 1732 aaPredicted RBP21.71■■□□□ 1.07
CLN6-211ENST00000635754 TMF1P82094 1093 aa21.71■■□□□ 1.07
CLN6-211ENST00000635754 ACEP12821 1306 aa21.71■■□□□ 1.07
CLN6-211ENST00000635754 MED1Q15648 1581 aaPredicted RBP21.7■■□□□ 1.06
CLN6-211ENST00000635754 SPATA31A6Q5VVP1 1343 aa21.7■■□□□ 1.06
CLN6-211ENST00000635754 TNS3Q68CZ2 1445 aa21.7■■□□□ 1.06
CLN6-211ENST00000635754 COL22A1Q8NFW1 1626 aaPredicted RBP21.69■■□□□ 1.06
CLN6-211ENST00000635754 PUS7Q96PZ0 661 aaKnown RBP21.69■■□□□ 1.06
CLN6-211ENST00000635754 CABP1Q9NZU7 370 aa21.69■■□□□ 1.06
CLN6-211ENST00000635754 SBNO1A3KN83 1393 aa21.69■■□□□ 1.06
CLN6-211ENST00000635754 SPATA31A3Q5VYP0 1347 aa21.68■■□□□ 1.06
CLN6-211ENST00000635754 DISP3Q9P2K9 1392 aa21.68■■□□□ 1.06
CLN6-211ENST00000635754 HSPA5P11021 654 aaKnown RBP21.67■■□□□ 1.06
CLN6-211ENST00000635754 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
CLN6-211ENST00000635754 ALS2Q96Q42 1657 aa21.66■■□□□ 1.06
CLN6-211ENST00000635754 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
CLN6-211ENST00000635754 ARHGEF10O15013 1369 aa21.64■■□□□ 1.05
CLN6-211ENST00000635754 PAK3O75914 559 aaPredicted RBP21.63■■□□□ 1.05
CLN6-211ENST00000635754 LMOD2Q6P5Q4 547 aa21.63■■□□□ 1.05
CLN6-211ENST00000635754 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
CLN6-211ENST00000635754 LRP6O75581 1613 aa21.62■■□□□ 1.05
CLN6-211ENST00000635754 NINLQ9Y2I6 1382 aa21.62■■□□□ 1.05
CLN6-211ENST00000635754 NUTM2BA6NNL0 878 aaPredicted RBP21.62■■□□□ 1.05
CLN6-211ENST00000635754 NUTM2EB1AL46 878 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms