RNA–Protein interactions for RNA: ENST00000635702.1

LINC01709-202, Transcript of long intergenic non-protein coding RNA 1709, humanhuman

TSL 5 BASIC

Gene LINC01709, Length 1,204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01709-202ENST00000635702 RBM26Q5T8P6 1007 aaKnown RBP12.14□□□□□ -0.47
LINC01709-202ENST00000635702 RNF19BQ6ZMZ0 732 aa12.14□□□□□ -0.47
LINC01709-202ENST00000635702 P3H3Q8IVL6 736 aa12.14□□□□□ -0.47
LINC01709-202ENST00000635702 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
LINC01709-202ENST00000635702 ATP13A2Q9NQ11 1180 aa12.12□□□□□ -0.47
LINC01709-202ENST00000635702 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
LINC01709-202ENST00000635702 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
LINC01709-202ENST00000635702 SNIP1Q8TAD8 396 aaKnown RBP12.11□□□□□ -0.47
LINC01709-202ENST00000635702 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
LINC01709-202ENST00000635702 MMP16P51512 607 aa12.09□□□□□ -0.47
LINC01709-202ENST00000635702 INSM1Q01101 510 aaPredicted RBP12.09□□□□□ -0.47
LINC01709-202ENST00000635702 TRIM32Q13049 653 aa12.09□□□□□ -0.47
LINC01709-202ENST00000635702 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
LINC01709-202ENST00000635702 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
LINC01709-202ENST00000635702 J3QL48 77 aa12.07□□□□□ -0.48
LINC01709-202ENST00000635702 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
LINC01709-202ENST00000635702 MRGPRX2Q96LB1 330 aa12.07□□□□□ -0.48
LINC01709-202ENST00000635702 HPS1Q92902 700 aa12.03□□□□□ -0.48
LINC01709-202ENST00000635702 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
LINC01709-202ENST00000635702 DXOO77932 396 aaKnown RBP12.01□□□□□ -0.49
LINC01709-202ENST00000635702 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
LINC01709-202ENST00000635702 Q3C1V9 767 aa12□□□□□ -0.49
LINC01709-202ENST00000635702 REPIN1Q9BWE0 567 aaKnown RBP11.99□□□□□ -0.49
LINC01709-202ENST00000635702 SKOR1P84550 965 aa11.98□□□□□ -0.49
LINC01709-202ENST00000635702 SMYD5Q6GMV2 418 aa11.98□□□□□ -0.49
LINC01709-202ENST00000635702 CD46P15529 392 aa11.97□□□□□ -0.49
LINC01709-202ENST00000635702 KIFC2Q96AC6 838 aa11.97□□□□□ -0.49
LINC01709-202ENST00000635702 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
LINC01709-202ENST00000635702 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
LINC01709-202ENST00000635702 WNT7BP56706 349 aa11.93□□□□□ -0.5
LINC01709-202ENST00000635702 LORP23490 312 aaPredicted RBP11.92□□□□□ -0.5
LINC01709-202ENST00000635702 KDM4AO75164 1064 aa11.91□□□□□ -0.5
LINC01709-202ENST00000635702 HLA-CQ95604 372 aa11.91□□□□□ -0.5
LINC01709-202ENST00000635702 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
LINC01709-202ENST00000635702 SIAH2O43255 324 aa11.87□□□□□ -0.51
LINC01709-202ENST00000635702 USP46P62068 366 aa11.86□□□□□ -0.51
LINC01709-202ENST00000635702 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
LINC01709-202ENST00000635702 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
LINC01709-202ENST00000635702 TRIM46Q7Z4K8 759 aa11.85□□□□□ -0.51
LINC01709-202ENST00000635702 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
LINC01709-202ENST00000635702 HOXA2O43364 376 aa11.84□□□□□ -0.51
LINC01709-202ENST00000635702 GMPRP36959 345 aa11.84□□□□□ -0.51
LINC01709-202ENST00000635702 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
LINC01709-202ENST00000635702 JUNDP17535 347 aa11.83□□□□□ -0.52
LINC01709-202ENST00000635702 NPAS3Q8IXF0 933 aa11.82□□□□□ -0.52
LINC01709-202ENST00000635702 BMP1P13497 986 aa11.81□□□□□ -0.52
LINC01709-202ENST00000635702 PTCRAQ6ISU1 281 aaPredicted RBP11.81□□□□□ -0.52
LINC01709-202ENST00000635702 GUCA2AQ02747 115 aa11.8□□□□□ -0.52
LINC01709-202ENST00000635702 MAP2K5Q13163 448 aa11.8□□□□□ -0.52
LINC01709-202ENST00000635702 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
LINC01709-202ENST00000635702 FAM181BA6NEQ2 426 aa11.78□□□□□ -0.52
LINC01709-202ENST00000635702 H3BM21 787 aa11.78□□□□□ -0.52
LINC01709-202ENST00000635702 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
LINC01709-202ENST00000635702 IRF7Q92985 503 aa11.78□□□□□ -0.52
LINC01709-202ENST00000635702 CAPN5O15484 640 aaPredicted RBP11.77□□□□□ -0.53
LINC01709-202ENST00000635702 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
LINC01709-202ENST00000635702 LOC100996750A0A140TA64 210 aa11.76□□□□□ -0.53
LINC01709-202ENST00000635702 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
LINC01709-202ENST00000635702 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
LINC01709-202ENST00000635702 KRTAP4-6Q9BYQ5 205 aa11.76□□□□□ -0.53
LINC01709-202ENST00000635702 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
LINC01709-202ENST00000635702 IRF6O14896 467 aa11.75□□□□□ -0.53
LINC01709-202ENST00000635702 VEGFBP49765 207 aa11.75□□□□□ -0.53
LINC01709-202ENST00000635702 RETREG3Q86VR2 466 aa11.74□□□□□ -0.53
LINC01709-202ENST00000635702 SH3BP2P78314 561 aa11.73□□□□□ -0.53
LINC01709-202ENST00000635702 WASF2Q9Y6W5 498 aa11.72□□□□□ -0.53
LINC01709-202ENST00000635702 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
LINC01709-202ENST00000635702 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
LINC01709-202ENST00000635702 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
LINC01709-202ENST00000635702 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
LINC01709-202ENST00000635702 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
LINC01709-202ENST00000635702 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
LINC01709-202ENST00000635702 CCDC102AQ96A19 550 aa11.65□□□□□ -0.54
LINC01709-202ENST00000635702 TLL2Q9Y6L7 1015 aa11.65□□□□□ -0.54
LINC01709-202ENST00000635702 MS4A1P11836 297 aa11.64□□□□□ -0.55
LINC01709-202ENST00000635702 MPNDQ8N594 471 aa11.64□□□□□ -0.55
LINC01709-202ENST00000635702 UNC93B1Q9H1C4 597 aa11.64□□□□□ -0.55
LINC01709-202ENST00000635702 VSIG8P0DPA2 414 aa11.63□□□□□ -0.55
LINC01709-202ENST00000635702 FDX1P10109 184 aa11.63□□□□□ -0.55
LINC01709-202ENST00000635702 PTPRNQ16849 979 aa11.63□□□□□ -0.55
LINC01709-202ENST00000635702 EVA1BQ9NVM1 165 aa11.63□□□□□ -0.55
LINC01709-202ENST00000635702 CLCN1P35523 988 aa11.62□□□□□ -0.55
LINC01709-202ENST00000635702 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
LINC01709-202ENST00000635702 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
LINC01709-202ENST00000635702 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
LINC01709-202ENST00000635702 BAP1Q92560 729 aa11.61□□□□□ -0.55
LINC01709-202ENST00000635702 TIMP2P16035 220 aa11.6□□□□□ -0.55
LINC01709-202ENST00000635702 NNTQ13423 1086 aa11.6□□□□□ -0.55
LINC01709-202ENST00000635702 KLF16Q9BXK1 252 aaPredicted RBP11.6□□□□□ -0.55
LINC01709-202ENST00000635702 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
LINC01709-202ENST00000635702 VARSP26640 1264 aaKnown RBP11.59□□□□□ -0.55
LINC01709-202ENST00000635702 ZNF511Q8NB15 262 aa11.59□□□□□ -0.55
LINC01709-202ENST00000635702 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
LINC01709-202ENST00000635702 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
LINC01709-202ENST00000635702 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
LINC01709-202ENST00000635702 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
LINC01709-202ENST00000635702 PURBQ96QR8 312 aaKnown RBP11.57□□□□□ -0.56
LINC01709-202ENST00000635702 ADH1CP00326 375 aa11.55□□□□□ -0.56
LINC01709-202ENST00000635702 SCARF1Q14162 830 aa11.55□□□□□ -0.56
LINC01709-202ENST00000635702 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 2096.4 ms