RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PLEKHH1Q9ULM0 1364 aa19.47■□□□□ 0.71
LINC00339-206ENST00000634451 PXDNQ92626 1479 aa19.47■□□□□ 0.71
LINC00339-206ENST00000634451 COL22A1Q8NFW1 1626 aaPredicted RBP19.47■□□□□ 0.71
LINC00339-206ENST00000634451 CDC42BPGQ6DT37 1551 aa19.46■□□□□ 0.71
LINC00339-206ENST00000634451 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
LINC00339-206ENST00000634451 STK26Q9P289 416 aa19.46■□□□□ 0.71
LINC00339-206ENST00000634451 USP21Q9UK80 565 aa19.46■□□□□ 0.71
LINC00339-206ENST00000634451 MYOM2P54296 1465 aa19.46■□□□□ 0.71
LINC00339-206ENST00000634451 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
LINC00339-206ENST00000634451 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
LINC00339-206ENST00000634451 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
LINC00339-206ENST00000634451 ATRNO75882 1429 aa19.43■□□□□ 0.7
LINC00339-206ENST00000634451 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
LINC00339-206ENST00000634451 IFT172Q9UG01 1749 aa19.42■□□□□ 0.7
LINC00339-206ENST00000634451 FOXO3O43524 673 aa19.42■□□□□ 0.7
LINC00339-206ENST00000634451 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
LINC00339-206ENST00000634451 SRCAPQ6ZRS2 3230 aa19.42■□□□□ 0.7
LINC00339-206ENST00000634451 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
LINC00339-206ENST00000634451 BCL9LQ86UU0 1499 aa19.41■□□□□ 0.7
LINC00339-206ENST00000634451 TRPC5Q9UL62 973 aaPredicted RBP19.4■□□□□ 0.7
LINC00339-206ENST00000634451 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.7
LINC00339-206ENST00000634451 EP400Q96L91 3159 aa19.39■□□□□ 0.69
LINC00339-206ENST00000634451 TECPR2O15040 1411 aa19.38■□□□□ 0.69
LINC00339-206ENST00000634451 NPHP3Q7Z494 1330 aa19.38■□□□□ 0.69
LINC00339-206ENST00000634451 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
LINC00339-206ENST00000634451 LRPPRCP42704 1394 aaKnown RBP19.37■□□□□ 0.69
LINC00339-206ENST00000634451 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
LINC00339-206ENST00000634451 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
LINC00339-206ENST00000634451 FMN2Q9NZ56 1722 aa19.37■□□□□ 0.69
LINC00339-206ENST00000634451 PIK3C2GO75747 1445 aa19.35■□□□□ 0.69
LINC00339-206ENST00000634451 RGPD8O14715 1765 aaPredicted RBP19.35■□□□□ 0.69
LINC00339-206ENST00000634451 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
LINC00339-206ENST00000634451 MPHOSPH9Q99550 1183 aa19.34■□□□□ 0.69
LINC00339-206ENST00000634451 GLI3P10071 1580 aa19.33■□□□□ 0.69
LINC00339-206ENST00000634451 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
LINC00339-206ENST00000634451 YTHDC2Q9H6S0 1430 aaKnown RBP19.32■□□□□ 0.68
LINC00339-206ENST00000634451 SPATA31A3Q5VYP0 1347 aa19.3■□□□□ 0.68
LINC00339-206ENST00000634451 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
LINC00339-206ENST00000634451 GJD4Q96KN9 370 aaPredicted RBP19.3■□□□□ 0.68
LINC00339-206ENST00000634451 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
LINC00339-206ENST00000634451 RALGAPBQ86X10 1494 aa19.29■□□□□ 0.68
LINC00339-206ENST00000634451 BRWD3Q6RI45 1802 aa19.29■□□□□ 0.68
LINC00339-206ENST00000634451 SLIT2O94813 1529 aa19.29■□□□□ 0.68
LINC00339-206ENST00000634451 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
LINC00339-206ENST00000634451 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.28■□□□□ 0.68
LINC00339-206ENST00000634451 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
LINC00339-206ENST00000634451 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
LINC00339-206ENST00000634451 CFAP70Q5T0N1 1121 aa19.27■□□□□ 0.68
LINC00339-206ENST00000634451 KRT28Q7Z3Y7 464 aa19.26■□□□□ 0.67
LINC00339-206ENST00000634451 ABCA3Q99758 1704 aa19.25■□□□□ 0.67
LINC00339-206ENST00000634451 UNC5CLQ8IV45 518 aa19.25■□□□□ 0.67
LINC00339-206ENST00000634451 NRXN1Q9ULB1 1477 aa19.24■□□□□ 0.67
LINC00339-206ENST00000634451 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
LINC00339-206ENST00000634451 C14orf93Q9H972 538 aaKnown RBP19.23■□□□□ 0.67
LINC00339-206ENST00000634451 TNS3Q68CZ2 1445 aa19.23■□□□□ 0.67
LINC00339-206ENST00000634451 DEFB132Q7Z7B7 95 aa19.22■□□□□ 0.67
LINC00339-206ENST00000634451 PRAM1Q96QH2 718 aa19.22■□□□□ 0.67
LINC00339-206ENST00000634451 PHF8Q9UPP1 1060 aa19.22■□□□□ 0.67
LINC00339-206ENST00000634451 PMFBP1Q8TBY8 1022 aa19.2■□□□□ 0.66
LINC00339-206ENST00000634451 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
LINC00339-206ENST00000634451 LMOD2Q6P5Q4 547 aa19.19■□□□□ 0.66
LINC00339-206ENST00000634451 SEPT12Q8IYM1 358 aa19.18■□□□□ 0.66
LINC00339-206ENST00000634451 HAP1P54257 671 aaPredicted RBP19.17■□□□□ 0.66
LINC00339-206ENST00000634451 HIRIP3Q9BW71 556 aaPredicted RBP19.17■□□□□ 0.66
LINC00339-206ENST00000634451 ADGRB1O14514 1584 aa19.17■□□□□ 0.66
LINC00339-206ENST00000634451 SIRT1Q96EB6 747 aa19.16■□□□□ 0.66
LINC00339-206ENST00000634451 TRPM3Q9HCF6 1732 aaPredicted RBP19.16■□□□□ 0.66
LINC00339-206ENST00000634451 DHX57Q6P158 1386 aaKnown RBP19.16■□□□□ 0.66
LINC00339-206ENST00000634451 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
LINC00339-206ENST00000634451 FAM83GA6ND36 823 aa19.15■□□□□ 0.66
LINC00339-206ENST00000634451 PRR36Q9H6K5 1346 aa19.15■□□□□ 0.66
LINC00339-206ENST00000634451 NRAPQ86VF7 1730 aa19.14■□□□□ 0.66
LINC00339-206ENST00000634451 NWD2Q9ULI1 1742 aa19.14■□□□□ 0.66
LINC00339-206ENST00000634451 VPS72Q15906 364 aa19.14■□□□□ 0.65
LINC00339-206ENST00000634451 CCDC9Q9Y3X0 531 aaKnown RBP19.14■□□□□ 0.65
LINC00339-206ENST00000634451 SBNO1A3KN83 1393 aa19.14■□□□□ 0.65
LINC00339-206ENST00000634451 CCDC125Q86Z20 511 aa19.13■□□□□ 0.65
LINC00339-206ENST00000634451 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
LINC00339-206ENST00000634451 DLC1Q96QB1 1528 aa19.13■□□□□ 0.65
LINC00339-206ENST00000634451 ADGRB2O60241 1585 aa19.13■□□□□ 0.65
LINC00339-206ENST00000634451 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
LINC00339-206ENST00000634451 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
LINC00339-206ENST00000634451 PSME1Q06323 249 aa19.12■□□□□ 0.65
LINC00339-206ENST00000634451 POGKQ9P215 609 aa19.11■□□□□ 0.65
LINC00339-206ENST00000634451 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
LINC00339-206ENST00000634451 ANKARQ7Z5J8 1434 aa19.09■□□□□ 0.65
LINC00339-206ENST00000634451 ARHGEF10O15013 1369 aa19.09■□□□□ 0.65
LINC00339-206ENST00000634451 FAM182BQ5T319 152 aa19.09■□□□□ 0.65
LINC00339-206ENST00000634451 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
LINC00339-206ENST00000634451 CRYBG1Q9Y4K1 1723 aa19.08■□□□□ 0.65
LINC00339-206ENST00000634451 ONECUT3O60422 494 aaPredicted RBP19.08■□□□□ 0.64
LINC00339-206ENST00000634451 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
LINC00339-206ENST00000634451 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
LINC00339-206ENST00000634451 A0A0G2JS52 829 aa19.07■□□□□ 0.64
LINC00339-206ENST00000634451 MYT1Q01538 1121 aa19.07■□□□□ 0.64
LINC00339-206ENST00000634451 BTG4Q9NY30 223 aa19.07■□□□□ 0.64
LINC00339-206ENST00000634451 ACIN1Q9UKV3 1341 aaKnown RBP19.06■□□□□ 0.64
LINC00339-206ENST00000634451 TULP4Q9NRJ4 1543 aa19.05■□□□□ 0.64
LINC00339-206ENST00000634451 PSDA5PKW4 1024 aaPredicted RBP19.05■□□□□ 0.64
LINC00339-206ENST00000634451 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms