RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 ST18O60284 1047 aa9.41□□□□□ -0.9
TCF4-269ENST00000630224 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
TCF4-269ENST00000630224 THEMISQ8N1K5 641 aaPredicted RBP9.4□□□□□ -0.9
TCF4-269ENST00000630224 UGGT1Q9NYU2 1555 aa9.4□□□□□ -0.9
TCF4-269ENST00000630224 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
TCF4-269ENST00000630224 PLEKHH2Q8IVE3 1493 aa9.4□□□□□ -0.91
TCF4-269ENST00000630224 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
TCF4-269ENST00000630224 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
TCF4-269ENST00000630224 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
TCF4-269ENST00000630224 WASHC2CQ9Y4E1 1318 aa9.39□□□□□ -0.91
TCF4-269ENST00000630224 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
TCF4-269ENST00000630224 POTEMA6NI47 508 aa9.39□□□□□ -0.91
TCF4-269ENST00000630224 MTUS2Q5JR59 1369 aa9.38□□□□□ -0.91
TCF4-269ENST00000630224 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
TCF4-269ENST00000630224 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
TCF4-269ENST00000630224 PZPP20742 1482 aa9.38□□□□□ -0.91
TCF4-269ENST00000630224 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
TCF4-269ENST00000630224 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
TCF4-269ENST00000630224 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
TCF4-269ENST00000630224 KDM5DQ9BY66 1539 aa9.37□□□□□ -0.91
TCF4-269ENST00000630224 FAM135AQ9P2D6 1515 aa9.37□□□□□ -0.91
TCF4-269ENST00000630224 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
TCF4-269ENST00000630224 KIF3CO14782 793 aa9.37□□□□□ -0.91
TCF4-269ENST00000630224 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
TCF4-269ENST00000630224 MIA2Q96PC5 1412 aa9.37□□□□□ -0.91
TCF4-269ENST00000630224 MED14O60244 1454 aa9.36□□□□□ -0.91
TCF4-269ENST00000630224 PDE4AP27815 886 aa9.36□□□□□ -0.91
TCF4-269ENST00000630224 EMP3P54852 163 aa9.36□□□□□ -0.91
TCF4-269ENST00000630224 TRIM26Q12899 539 aaPredicted RBP9.36□□□□□ -0.91
TCF4-269ENST00000630224 MBD5Q9P267 1494 aa9.35□□□□□ -0.91
TCF4-269ENST00000630224 SYNMO15061 1565 aa9.35□□□□□ -0.91
TCF4-269ENST00000630224 HOXB3P14651 431 aaPredicted RBP9.35□□□□□ -0.91
TCF4-269ENST00000630224 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
TCF4-269ENST00000630224 ZC3H13Q5T200 1668 aaKnown RBP9.35□□□□□ -0.91
TCF4-269ENST00000630224 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
TCF4-269ENST00000630224 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
TCF4-269ENST00000630224 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
TCF4-269ENST00000630224 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
TCF4-269ENST00000630224 RBM33Q96EV2 1170 aaKnown RBP9.33□□□□□ -0.92
TCF4-269ENST00000630224 CEP152O94986 1710 aa9.33□□□□□ -0.92
TCF4-269ENST00000630224 UBR1Q8IWV7 1749 aa9.33□□□□□ -0.92
TCF4-269ENST00000630224 RTEL1-TNFRSF6BF6WH68 1400 aa9.32□□□□□ -0.92
TCF4-269ENST00000630224 EHBP1L1Q8N3D4 1523 aa9.32□□□□□ -0.92
TCF4-269ENST00000630224 FOXK1P85037 733 aa9.32□□□□□ -0.92
TCF4-269ENST00000630224 PLPP6Q8IY26 295 aa9.32□□□□□ -0.92
TCF4-269ENST00000630224 CCDC141Q6ZP82 1450 aa9.31□□□□□ -0.92
TCF4-269ENST00000630224 ROBO1Q9Y6N7 1651 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 LTKP29376 864 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 DSG2Q14126 1118 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 PPP1R15BQ5SWA1 713 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 TXNDC2Q86VQ3 553 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 DDX27Q96GQ7 796 aaKnown RBP9.3□□□□□ -0.92
TCF4-269ENST00000630224 LARP6Q9BRS8 491 aaKnown RBP9.3□□□□□ -0.92
TCF4-269ENST00000630224 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
TCF4-269ENST00000630224 HOXB1P14653 301 aaPredicted RBP9.29□□□□□ -0.92
TCF4-269ENST00000630224 PCGF6Q9BYE7 350 aa9.29□□□□□ -0.92
TCF4-269ENST00000630224 ABCC3O15438 1527 aa9.29□□□□□ -0.92
TCF4-269ENST00000630224 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
TCF4-269ENST00000630224 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
TCF4-269ENST00000630224 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
TCF4-269ENST00000630224 TBC1D12O60347 775 aa9.28□□□□□ -0.92
TCF4-269ENST00000630224 ERBB3P21860 1342 aa9.28□□□□□ -0.92
TCF4-269ENST00000630224 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
TCF4-269ENST00000630224 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
TCF4-269ENST00000630224 PHLPP1O60346 1717 aa9.27□□□□□ -0.93
TCF4-269ENST00000630224 TMEM94Q12767 1356 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 FAM135BQ49AJ0 1406 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 SLC34A2O95436 690 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 TSPY4P0CV99 314 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 TSPY10P0CW01 314 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
TCF4-269ENST00000630224 TRIM52Q96A61 297 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 PIK3C2BO00750 1634 aa9.26□□□□□ -0.93
TCF4-269ENST00000630224 MYOM3Q5VTT5 1437 aa9.25□□□□□ -0.93
TCF4-269ENST00000630224 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
TCF4-269ENST00000630224 SLC26A8Q96RN1 970 aa9.25□□□□□ -0.93
TCF4-269ENST00000630224 PCDH10Q9P2E7 1040 aa9.25□□□□□ -0.93
TCF4-269ENST00000630224 RRBP1Q9P2E9 1410 aaKnown RBP9.24□□□□□ -0.93
TCF4-269ENST00000630224 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
TCF4-269ENST00000630224 GPR153Q6NV75 609 aa9.24□□□□□ -0.93
TCF4-269ENST00000630224 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
TCF4-269ENST00000630224 EID1Q9Y6B2 187 aa9.24□□□□□ -0.93
TCF4-269ENST00000630224 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
TCF4-269ENST00000630224 FGD6Q6ZV73 1430 aa9.23□□□□□ -0.93
TCF4-269ENST00000630224 ARHGAP23Q9P227 1491 aa9.23□□□□□ -0.93
TCF4-269ENST00000630224 SLIT1O75093 1534 aa9.23□□□□□ -0.93
TCF4-269ENST00000630224 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
TCF4-269ENST00000630224 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
TCF4-269ENST00000630224 UPF1Q92900 1129 aaKnown RBP eCLIP9.23□□□□□ -0.93
TCF4-269ENST00000630224 BCANQ96GW7 911 aa9.23□□□□□ -0.93
TCF4-269ENST00000630224 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
TCF4-269ENST00000630224 NUDT7P0C024 238 aa9.22□□□□□ -0.93
TCF4-269ENST00000630224 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
TCF4-269ENST00000630224 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
TCF4-269ENST00000630224 EIF2AK4Q9P2K8 1649 aaKnown RBP9.22□□□□□ -0.93
TCF4-269ENST00000630224 MEX3CQ5U5Q3 659 aaKnown RBP9.21□□□□□ -0.94
TCF4-269ENST00000630224 CDAN1Q8IWY9 1227 aa9.21□□□□□ -0.94
TCF4-269ENST00000630224 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■■■□□ 17.1
TCF4-269ENST00000630224 KCNA6P17658 529 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms