RNA–Protein interactions for RNA: ENST00000629795.2

LINC02028-229, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 618 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-229	ENST00000629795	NALCN	Q8IZF0	1738 aa		13.98	□□□□□ -0.17
LINC02028-229	ENST00000629795	COL16A1	Q07092	1604 aa	Predicted RBP	13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	NUTM2E	B1AL46	878 aa	Predicted RBP	13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	ESCO1	Q5FWF5	840 aa		13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	POTEA	Q6S8J7	498 aa		13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	TECPR2	O15040	1411 aa		13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.97	□□□□□ -0.17
LINC02028-229	ENST00000629795	MYOM2	P54296	1465 aa		13.96	□□□□□ -0.17
LINC02028-229	ENST00000629795	LRRC59	Q96AG4	307 aa	Known RBP	13.96	□□□□□ -0.17
LINC02028-229	ENST00000629795	PRAM1	Q96QH2	718 aa		13.96	□□□□□ -0.17
LINC02028-229	ENST00000629795	TRAK1	Q9UPV9	953 aa		13.95	□□□□□ -0.18
LINC02028-229	ENST00000629795	SPATA31A6	Q5VVP1	1343 aa		13.94	□□□□□ -0.18
LINC02028-229	ENST00000629795	POGK	Q9P215	609 aa		13.94	□□□□□ -0.18
LINC02028-229	ENST00000629795	FOXO3	O43524	673 aa		13.93	□□□□□ -0.18
LINC02028-229	ENST00000629795	MEX3C	Q5U5Q3	659 aa	Known RBP	13.93	□□□□□ -0.18
LINC02028-229	ENST00000629795	STAC3	Q96MF2	364 aa		13.93	□□□□□ -0.18
LINC02028-229	ENST00000629795	SIN3A	Q96ST3	1273 aa		13.93	□□□□□ -0.18
LINC02028-229	ENST00000629795	SOS2	Q07890	1332 aa	Predicted RBP	13.92	□□□□□ -0.18
LINC02028-229	ENST00000629795	XPC	Q01831	940 aa	Predicted RBP	13.92	□□□□□ -0.18
LINC02028-229	ENST00000629795	LRP6	O75581	1613 aa		13.92	□□□□□ -0.18
LINC02028-229	ENST00000629795	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.9	□□□□□ -0.18
LINC02028-229	ENST00000629795	ADGRB1	O14514	1584 aa		13.89	□□□□□ -0.19
LINC02028-229	ENST00000629795	PNPLA6	Q8IY17	1366 aa		13.89	□□□□□ -0.19
LINC02028-229	ENST00000629795	NEUROD1	Q13562	356 aa		13.89	□□□□□ -0.19
LINC02028-229	ENST00000629795	NBPF1	Q3BBV0	1214 aa		13.89	□□□□□ -0.19
LINC02028-229	ENST00000629795	NHSL1	Q5SYE7	1610 aa		13.89	□□□□□ -0.19
LINC02028-229	ENST00000629795	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC02028-229	ENST00000629795	L3MBTL2	Q969R5	705 aa		13.88	□□□□□ -0.19
LINC02028-229	ENST00000629795	CDC42BPG	Q6DT37	1551 aa		13.88	□□□□□ -0.19
LINC02028-229	ENST00000629795	KNDC1	Q76NI1	1749 aa		13.87	□□□□□ -0.19
LINC02028-229	ENST00000629795	ADAMTS2	O95450	1211 aa		13.87	□□□□□ -0.19
LINC02028-229	ENST00000629795	PHF8	Q9UPP1	1060 aa		13.87	□□□□□ -0.19
LINC02028-229	ENST00000629795	NPHP3	Q7Z494	1330 aa		13.87	□□□□□ -0.19
LINC02028-229	ENST00000629795	SHPRH	Q149N8	1683 aa		13.86	□□□□□ -0.19
LINC02028-229	ENST00000629795	KRT28	Q7Z3Y7	464 aa		13.86	□□□□□ -0.19
LINC02028-229	ENST00000629795	TRIM26	Q12899	539 aa	Predicted RBP	13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	ZNF772	Q68DY9	489 aa	Predicted RBP	13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	PMFBP1	Q8TBY8	1022 aa		13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	C8orf37	Q96NL8	207 aa		13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	LAMC1	P11047	1609 aa		13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	AFF2	P51816	1311 aa		13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	DLC1	Q96QB1	1528 aa		13.85	□□□□□ -0.19
LINC02028-229	ENST00000629795	WASL	O00401	505 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC02028-229	ENST00000629795	NGLY1	Q96IV0	654 aa		13.83	□□□□□ -0.2
LINC02028-229	ENST00000629795	PRR36	Q9H6K5	1346 aa		13.83	□□□□□ -0.2
LINC02028-229	ENST00000629795	PXDN	Q92626	1479 aa		13.82	□□□□□ -0.2
LINC02028-229	ENST00000629795	FMN2	Q9NZ56	1722 aa		13.81	□□□□□ -0.2
LINC02028-229	ENST00000629795	PLEKHG5	O94827	1062 aa		13.81	□□□□□ -0.2
LINC02028-229	ENST00000629795	PSME1	Q06323	249 aa		13.81	□□□□□ -0.2
LINC02028-229	ENST00000629795	QTRT2	Q9H974	415 aa	Known RBP	13.81	□□□□□ -0.2
LINC02028-229	ENST00000629795	SPATA31A3	Q5VYP0	1347 aa		13.81	□□□□□ -0.2
LINC02028-229	ENST00000629795	RXRB	P28702	533 aa		13.8	□□□□□ -0.2
LINC02028-229	ENST00000629795	RGPD8	O14715	1765 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC02028-229	ENST00000629795	NUDT16	Q96DE0	195 aa	Known RBP	13.79	□□□□□ -0.2
LINC02028-229	ENST00000629795	CDK19	Q9BWU1	502 aa		13.79	□□□□□ -0.2
LINC02028-229	ENST00000629795	LMOD2	Q6P5Q4	547 aa		13.78	□□□□□ -0.2
LINC02028-229	ENST00000629795	CABLES1	Q8TDN4	633 aa		13.78	□□□□□ -0.2
LINC02028-229	ENST00000629795	NBPF8	Q3BBV2	869 aa		13.77	□□□□□ -0.21
LINC02028-229	ENST00000629795	ANKAR	Q7Z5J8	1434 aa		13.77	□□□□□ -0.21
LINC02028-229	ENST00000629795	USP21	Q9UK80	565 aa		13.77	□□□□□ -0.21
LINC02028-229	ENST00000629795	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC02028-229	ENST00000629795	NGDN	Q8NEJ9	315 aa	Known RBP	13.76	□□□□□ -0.21
LINC02028-229	ENST00000629795	USP32	Q8NFA0	1604 aa		13.75	□□□□□ -0.21
LINC02028-229	ENST00000629795	ADRA2B	P18089	450 aa		13.75	□□□□□ -0.21
LINC02028-229	ENST00000629795	SBNO1	A3KN83	1393 aa		13.74	□□□□□ -0.21
LINC02028-229	ENST00000629795	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC02028-229	ENST00000629795	RBM6	P78332	1123 aa	Known RBP	13.74	□□□□□ -0.21
LINC02028-229	ENST00000629795	ADGRB2	O60241	1585 aa		13.74	□□□□□ -0.21
LINC02028-229	ENST00000629795	KIF1A	Q12756	1690 aa		13.73	□□□□□ -0.21
LINC02028-229	ENST00000629795	CABP2	Q9NPB3	220 aa		13.73	□□□□□ -0.21
LINC02028-229	ENST00000629795	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.73	□□□□□ -0.21
LINC02028-229	ENST00000629795	KIAA1210	Q9ULL0	1709 aa		13.73	□□□□□ -0.21
LINC02028-229	ENST00000629795	EIF3A	Q14152	1382 aa	Known RBP	13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	PAK3	O75914	559 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	TRPC5	Q9UL62	973 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	CCDC61	Q9Y6R9	512 aa		13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	TULP4	Q9NRJ4	1543 aa		13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	TNS3	Q68CZ2	1445 aa		13.72	□□□□□ -0.21
LINC02028-229	ENST00000629795	GPRASP1	Q5JY77	1395 aa		13.71	□□□□□ -0.21
LINC02028-229	ENST00000629795	HAP1	P54257	671 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC02028-229	ENST00000629795	SRPK2	P78362	688 aa	Known RBP	13.71	□□□□□ -0.21
LINC02028-229	ENST00000629795	BCL9L	Q86UU0	1499 aa		13.7	□□□□□ -0.22
LINC02028-229	ENST00000629795	PLEKHG3	A1L390	1219 aa		13.7	□□□□□ -0.22
LINC02028-229	ENST00000629795	FAM83G	A6ND36	823 aa		13.7	□□□□□ -0.22
LINC02028-229	ENST00000629795	ACE	P12821	1306 aa		13.69	□□□□□ -0.22
LINC02028-229	ENST00000629795	ATP7B	P35670	1465 aa		13.69	□□□□□ -0.22
LINC02028-229	ENST00000629795	ARHGEF10	O15013	1369 aa		13.69	□□□□□ -0.22
LINC02028-229	ENST00000629795	ROCK2	O75116	1388 aa	Known RBP	13.69	□□□□□ -0.22
LINC02028-229	ENST00000629795	NUTM2G	Q5VZR2	741 aa		13.68	□□□□□ -0.22
LINC02028-229	ENST00000629795	UNC5CL	Q8IV45	518 aa		13.68	□□□□□ -0.22
LINC02028-229	ENST00000629795	ATRN	O75882	1429 aa		13.67	□□□□□ -0.22
LINC02028-229	ENST00000629795	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
LINC02028-229	ENST00000629795	CABP1	Q9NZU7	370 aa		13.67	□□□□□ -0.22
LINC02028-229	ENST00000629795	TONSL	Q96HA7	1378 aa		13.67	□□□□□ -0.22
LINC02028-229	ENST00000629795	GJD4	Q96KN9	370 aa	Predicted RBP	13.66	□□□□□ -0.22
LINC02028-229	ENST00000629795	CARD11	Q9BXL7	1154 aa		13.66	□□□□□ -0.22

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