RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 UBR1Q8IWV7 1749 aa8.26□□□□□ -1.09
LINC00550-202ENST00000629570 STRCQ7RTU9 1775 aa8.26□□□□□ -1.09
LINC00550-202ENST00000629570 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
LINC00550-202ENST00000629570 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.26□□□□□ -1.09
LINC00550-202ENST00000629570 PTPRTO14522 1441 aa8.26□□□□□ -1.09
LINC00550-202ENST00000629570 SPHKAPQ2M3C7 1700 aa8.26□□□□□ -1.09
LINC00550-202ENST00000629570 ADGRB3O60242 1522 aa8.25□□□□□ -1.09
LINC00550-202ENST00000629570 TRPM2O94759 1503 aa8.25□□□□□ -1.09
LINC00550-202ENST00000629570 MKRN3Q13064 507 aaKnown RBP8.25□□□□□ -1.09
LINC00550-202ENST00000629570 CDAN1Q8IWY9 1227 aa8.25□□□□□ -1.09
LINC00550-202ENST00000629570 SPOCK2Q92563 424 aa8.25□□□□□ -1.09
LINC00550-202ENST00000629570 MPHOSPH9Q99550 1183 aa8.25□□□□□ -1.09
LINC00550-202ENST00000629570 NEURL4Q96JN8 1562 aa8.24□□□□□ -1.09
LINC00550-202ENST00000629570 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
LINC00550-202ENST00000629570 SLC52A1Q9NWF4 448 aa8.24□□□□□ -1.09
LINC00550-202ENST00000629570 CLTCL1P53675 1640 aa8.24□□□□□ -1.09
LINC00550-202ENST00000629570 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
LINC00550-202ENST00000629570 TMEM131LA2VDJ0 1609 aa8.23□□□□□ -1.09
LINC00550-202ENST00000629570 THEMISQ8N1K5 641 aaPredicted RBP8.23□□□□□ -1.09
LINC00550-202ENST00000629570 CIZ1Q9ULV3 898 aaPredicted RBP8.23□□□□□ -1.09
LINC00550-202ENST00000629570 ARHGAP23Q9P227 1491 aa8.23□□□□□ -1.09
LINC00550-202ENST00000629570 KDM5AP29375 1690 aaKnown RBP8.23□□□□□ -1.09
LINC00550-202ENST00000629570 SLIT1O75093 1534 aa8.23□□□□□ -1.09
LINC00550-202ENST00000629570 TMEM2Q9UHN6 1383 aa8.22□□□□□ -1.09
LINC00550-202ENST00000629570 SCAF11Q99590 1463 aaKnown RBP8.22□□□□□ -1.09
LINC00550-202ENST00000629570 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
LINC00550-202ENST00000629570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00550-202ENST00000629570 POLR1AO95602 1720 aaPredicted RBP8.22□□□□□ -1.09
LINC00550-202ENST00000629570 CHGAP10645 457 aaKnown RBP8.21□□□□□ -1.1
LINC00550-202ENST00000629570 HRCP23327 699 aa8.21□□□□□ -1.1
LINC00550-202ENST00000629570 LTKP29376 864 aa8.21□□□□□ -1.1
LINC00550-202ENST00000629570 C3orf67Q6ZVT6 689 aa8.21□□□□□ -1.1
LINC00550-202ENST00000629570 MYO5BQ9ULV0 1848 aa8.21□□□□□ -1.1
LINC00550-202ENST00000629570 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
LINC00550-202ENST00000629570 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
LINC00550-202ENST00000629570 SNPHO15079 494 aa8.2□□□□□ -1.1
LINC00550-202ENST00000629570 ANKLE2Q86XL3 938 aa8.2□□□□□ -1.1
LINC00550-202ENST00000629570 L3MBTL3Q96JM7 780 aaPredicted RBP8.2□□□□□ -1.1
LINC00550-202ENST00000629570 CCDC144AA2RUR9 1427 aa8.2□□□□□ -1.1
LINC00550-202ENST00000629570 NPHP4O75161 1426 aaPredicted RBP8.2□□□□□ -1.1
LINC00550-202ENST00000629570 MED14O60244 1454 aa8.19□□□□□ -1.1
LINC00550-202ENST00000629570 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
LINC00550-202ENST00000629570 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
LINC00550-202ENST00000629570 RIMS2Q9UQ26 1411 aa8.19□□□□□ -1.1
LINC00550-202ENST00000629570 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
LINC00550-202ENST00000629570 NUTM2DQ5VT03 806 aaPredicted RBP8.18□□□□□ -1.1
LINC00550-202ENST00000629570 ILDR1Q86SU0 546 aaPredicted RBP8.18□□□□□ -1.1
LINC00550-202ENST00000629570 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
LINC00550-202ENST00000629570 ANKRD30BQ9BXX2 1392 aa8.18□□□□□ -1.1
LINC00550-202ENST00000629570 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
LINC00550-202ENST00000629570 ZNF335Q9H4Z2 1342 aaPredicted RBP8.17□□□□□ -1.1
LINC00550-202ENST00000629570 SPATA31E1Q6ZUB1 1445 aa8.17□□□□□ -1.1
LINC00550-202ENST00000629570 NEXMIFQ5QGS0 1516 aa8.17□□□□□ -1.1
LINC00550-202ENST00000629570 KIF1BO60333 1816 aa8.16□□□□□ -1.1
LINC00550-202ENST00000629570 PPP1R15AO75807 674 aaPredicted RBP8.16□□□□□ -1.1
LINC00550-202ENST00000629570 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
LINC00550-202ENST00000629570 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
LINC00550-202ENST00000629570 PLEKHG1Q9ULL1 1385 aa8.15□□□□□ -1.1
LINC00550-202ENST00000629570 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.1
LINC00550-202ENST00000629570 PCGF6Q9BYE7 350 aa8.15□□□□□ -1.1
LINC00550-202ENST00000629570 LTBP4Q8N2S1 1624 aa8.14□□□□□ -1.11
LINC00550-202ENST00000629570 DHX57Q6P158 1386 aaKnown RBP8.14□□□□□ -1.11
LINC00550-202ENST00000629570 RGL3Q3MIN7 710 aa8.14□□□□□ -1.11
LINC00550-202ENST00000629570 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.14□□□□□ -1.11
LINC00550-202ENST00000629570 SLC26A8Q96RN1 970 aa8.14□□□□□ -1.11
LINC00550-202ENST00000629570 ADAMTS13Q76LX8 1427 aa8.13□□□□□ -1.11
LINC00550-202ENST00000629570 NRXN3Q9Y4C0 1643 aa8.13□□□□□ -1.11
LINC00550-202ENST00000629570 PPLO60437 1756 aa8.12□□□□□ -1.11
LINC00550-202ENST00000629570 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
LINC00550-202ENST00000629570 BCANQ96GW7 911 aa8.12□□□□□ -1.11
LINC00550-202ENST00000629570 SETBP1Q9Y6X0 1596 aa8.12□□□□□ -1.11
LINC00550-202ENST00000629570 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
LINC00550-202ENST00000629570 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
LINC00550-202ENST00000629570 DIP2AQ14689 1571 aa8.1□□□□□ -1.11
LINC00550-202ENST00000629570 RPGRIP1LQ68CZ1 1315 aa8.1□□□□□ -1.11
LINC00550-202ENST00000629570 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
LINC00550-202ENST00000629570 CERKQ8TCT0 537 aa8.1□□□□□ -1.11
LINC00550-202ENST00000629570 NWD1Q149M9 1564 aa8.1□□□□□ -1.11
LINC00550-202ENST00000629570 METP08581 1390 aa8.1□□□□□ -1.11
LINC00550-202ENST00000629570 CPS1P31327 1500 aa8.09□□□□□ -1.11
LINC00550-202ENST00000629570 MYOM2P54296 1465 aa8.09□□□□□ -1.11
LINC00550-202ENST00000629570 VGFO15240 615 aaPredicted RBP8.09□□□□□ -1.11
LINC00550-202ENST00000629570 EMP3P54852 163 aa8.09□□□□□ -1.11
LINC00550-202ENST00000629570 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
LINC00550-202ENST00000629570 PIK3C2GO75747 1445 aa8.09□□□□□ -1.11
LINC00550-202ENST00000629570 NRXN1Q9ULB1 1477 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 ALKQ9UM73 1620 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 G3V3G9 751 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 SIN3AQ96ST3 1273 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 TBX22Q9Y458 520 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 PTPRUQ92729 1446 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 SETD1AO15047 1707 aaKnown RBP8.08□□□□□ -1.12
LINC00550-202ENST00000629570 LRRC7Q96NW7 1537 aa8.08□□□□□ -1.12
LINC00550-202ENST00000629570 NKTRP30414 1462 aaKnown RBP8.07□□□□□ -1.12
LINC00550-202ENST00000629570 KCNA6P17658 529 aa8.07□□□□□ -1.12
LINC00550-202ENST00000629570 RBM33Q96EV2 1170 aaKnown RBP8.07□□□□□ -1.12
LINC00550-202ENST00000629570 ASXL1Q8IXJ9 1541 aa8.07□□□□□ -1.12
LINC00550-202ENST00000629570 PIK3R4Q99570 1358 aa8.07□□□□□ -1.12
LINC00550-202ENST00000629570 XRN1Q8IZH2 1706 aaKnown RBP8.06□□□□□ -1.12
LINC00550-202ENST00000629570 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms