RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
CHD2-212ENST00000627622 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
CHD2-212ENST00000627622 USP21Q9UK80 565 aa13.13□□□□□ -0.31
CHD2-212ENST00000627622 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
CHD2-212ENST00000627622 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
CHD2-212ENST00000627622 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
CHD2-212ENST00000627622 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
CHD2-212ENST00000627622 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
CHD2-212ENST00000627622 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
CHD2-212ENST00000627622 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
CHD2-212ENST00000627622 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
CHD2-212ENST00000627622 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
CHD2-212ENST00000627622 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
CHD2-212ENST00000627622 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
CHD2-212ENST00000627622 ATRNO75882 1429 aa13.08□□□□□ -0.32
CHD2-212ENST00000627622 MYOM2P54296 1465 aa13.07□□□□□ -0.32
CHD2-212ENST00000627622 PXDNQ92626 1479 aa13.07□□□□□ -0.32
CHD2-212ENST00000627622 EP400Q96L91 3159 aa13.06□□□□□ -0.32
CHD2-212ENST00000627622 FOXO3O43524 673 aa13.05□□□□□ -0.32
CHD2-212ENST00000627622 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
CHD2-212ENST00000627622 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
CHD2-212ENST00000627622 SRCAPQ6ZRS2 3230 aa13.05□□□□□ -0.32
CHD2-212ENST00000627622 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
CHD2-212ENST00000627622 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
CHD2-212ENST00000627622 KNDC1Q76NI1 1749 aa13.04□□□□□ -0.32
CHD2-212ENST00000627622 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
CHD2-212ENST00000627622 ADGRF5Q8IZF2 1346 aa13.04□□□□□ -0.32
CHD2-212ENST00000627622 TECPR2O15040 1411 aa13.03□□□□□ -0.32
CHD2-212ENST00000627622 CCDC125Q86Z20 511 aa13.03□□□□□ -0.32
CHD2-212ENST00000627622 FMN2Q9NZ56 1722 aa13.03□□□□□ -0.32
CHD2-212ENST00000627622 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.32
CHD2-212ENST00000627622 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.32
CHD2-212ENST00000627622 STK26Q9P289 416 aa13.02□□□□□ -0.32
CHD2-212ENST00000627622 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.32
CHD2-212ENST00000627622 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
CHD2-212ENST00000627622 NUTM2FA1L443 756 aa13.02□□□□□ -0.33
CHD2-212ENST00000627622 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
CHD2-212ENST00000627622 CCDC144AA2RUR9 1427 aa13.01□□□□□ -0.33
CHD2-212ENST00000627622 KIF1AQ12756 1690 aa13.01□□□□□ -0.33
CHD2-212ENST00000627622 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
CHD2-212ENST00000627622 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
CHD2-212ENST00000627622 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
CHD2-212ENST00000627622 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
CHD2-212ENST00000627622 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
CHD2-212ENST00000627622 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
CHD2-212ENST00000627622 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
CHD2-212ENST00000627622 UNC5CLQ8IV45 518 aa12.99□□□□□ -0.33
CHD2-212ENST00000627622 GLI3P10071 1580 aa12.98□□□□□ -0.33
CHD2-212ENST00000627622 SLIT2O94813 1529 aa12.98□□□□□ -0.33
CHD2-212ENST00000627622 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
CHD2-212ENST00000627622 USP32Q8NFA0 1604 aa12.98□□□□□ -0.33
CHD2-212ENST00000627622 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
CHD2-212ENST00000627622 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
CHD2-212ENST00000627622 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
CHD2-212ENST00000627622 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.33
CHD2-212ENST00000627622 SIRT1Q96EB6 747 aa12.96□□□□□ -0.34
CHD2-212ENST00000627622 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
CHD2-212ENST00000627622 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
CHD2-212ENST00000627622 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
CHD2-212ENST00000627622 PSME1Q06323 249 aa12.94□□□□□ -0.34
CHD2-212ENST00000627622 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
CHD2-212ENST00000627622 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
CHD2-212ENST00000627622 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
CHD2-212ENST00000627622 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
CHD2-212ENST00000627622 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
CHD2-212ENST00000627622 VPS72Q15906 364 aa12.92□□□□□ -0.34
CHD2-212ENST00000627622 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
CHD2-212ENST00000627622 SEPT12Q8IYM1 358 aa12.91□□□□□ -0.34
CHD2-212ENST00000627622 CABLES1Q8TDN4 633 aa12.91□□□□□ -0.34
CHD2-212ENST00000627622 SBNO1A3KN83 1393 aa12.91□□□□□ -0.34
CHD2-212ENST00000627622 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
CHD2-212ENST00000627622 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
CHD2-212ENST00000627622 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
CHD2-212ENST00000627622 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
CHD2-212ENST00000627622 CFAP70Q5T0N1 1121 aa12.9□□□□□ -0.34
CHD2-212ENST00000627622 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
CHD2-212ENST00000627622 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
CHD2-212ENST00000627622 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
CHD2-212ENST00000627622 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
CHD2-212ENST00000627622 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
CHD2-212ENST00000627622 ACIN1Q9UKV3 1341 aaKnown RBP12.89□□□□□ -0.35
CHD2-212ENST00000627622 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHD2-212ENST00000627622 PRAM1Q96QH2 718 aa12.88□□□□□ -0.35
CHD2-212ENST00000627622 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
CHD2-212ENST00000627622 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
CHD2-212ENST00000627622 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
CHD2-212ENST00000627622 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
CHD2-212ENST00000627622 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
CHD2-212ENST00000627622 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
CHD2-212ENST00000627622 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
CHD2-212ENST00000627622 POGKQ9P215 609 aa12.87□□□□□ -0.35
CHD2-212ENST00000627622 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
CHD2-212ENST00000627622 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
CHD2-212ENST00000627622 COL14A1Q05707 1796 aaKnown RBP12.85□□□□□ -0.35
CHD2-212ENST00000627622 LRP5O75197 1615 aa12.85□□□□□ -0.35
CHD2-212ENST00000627622 A0A0G2JS52 829 aa12.83□□□□□ -0.36
CHD2-212ENST00000627622 MYT1Q01538 1121 aa12.83□□□□□ -0.36
CHD2-212ENST00000627622 BTG4Q9NY30 223 aa12.83□□□□□ -0.36
CHD2-212ENST00000627622 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
CHD2-212ENST00000627622 RGPD1P0DJD0 1748 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms