RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 ADGRL3Q9HAR2 1447 aa27.13■■□□□ 1.93
CNOT9-209ENST00000627282 ROCK2O75116 1388 aaKnown RBP27.12■■□□□ 1.93
CNOT9-209ENST00000627282 GPRASP1Q5JY77 1395 aa27.1■■□□□ 1.93
CNOT9-209ENST00000627282 KNDC1Q76NI1 1749 aa27.09■■□□□ 1.93
CNOT9-209ENST00000627282 NALCNQ8IZF0 1738 aa27.09■■□□□ 1.93
CNOT9-209ENST00000627282 DIEXFQ68CQ4 756 aaKnown RBP27.08■■□□□ 1.93
CNOT9-209ENST00000627282 TRAK1Q9UPV9 953 aa27.07■■□□□ 1.92
CNOT9-209ENST00000627282 DLC1Q96QB1 1528 aa27.05■■□□□ 1.92
CNOT9-209ENST00000627282 DISP3Q9P2K9 1392 aa27.04■■□□□ 1.92
CNOT9-209ENST00000627282 WAPLQ7Z5K2 1190 aa27.03■■□□□ 1.92
CNOT9-209ENST00000627282 CARD11Q9BXL7 1154 aa27.03■■□□□ 1.92
CNOT9-209ENST00000627282 PLEKHH1Q9ULM0 1364 aa27.03■■□□□ 1.92
CNOT9-209ENST00000627282 MST1RQ04912 1400 aa27.03■■□□□ 1.92
CNOT9-209ENST00000627282 SIRT1Q96EB6 747 aa27.02■■□□□ 1.92
CNOT9-209ENST00000627282 ARHGEF28Q8N1W1 1705 aaKnown RBP27■■□□□ 1.91
CNOT9-209ENST00000627282 PRAM1Q96QH2 718 aa27■■□□□ 1.91
CNOT9-209ENST00000627282 MED1Q15648 1581 aaPredicted RBP26.98■■□□□ 1.91
CNOT9-209ENST00000627282 PHLPP1O60346 1717 aa26.98■■□□□ 1.91
CNOT9-209ENST00000627282 BRINP3Q76B58 766 aa26.98■■□□□ 1.91
CNOT9-209ENST00000627282 AHDC1Q5TGY3 1603 aaPredicted RBP26.96■■□□□ 1.91
CNOT9-209ENST00000627282 POGKQ9P215 609 aa26.95■■□□□ 1.91
CNOT9-209ENST00000627282 SAFB2Q14151 953 aaKnown RBP eCLIP26.94■■□□□ 1.9
CNOT9-209ENST00000627282 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
CNOT9-209ENST00000627282 CDC42BPGQ6DT37 1551 aa26.94■■□□□ 1.9
CNOT9-209ENST00000627282 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
CNOT9-209ENST00000627282 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.9
CNOT9-209ENST00000627282 EIF3AQ14152 1382 aaKnown RBP26.89■■□□□ 1.9
CNOT9-209ENST00000627282 USP47Q96K76 1375 aa26.88■■□□□ 1.89
CNOT9-209ENST00000627282 JCADQ9P266 1359 aa26.87■■□□□ 1.89
CNOT9-209ENST00000627282 NHSL1Q5SYE7 1610 aa26.87■■□□□ 1.89
CNOT9-209ENST00000627282 MINK1Q8N4C8 1332 aaPredicted RBP26.86■■□□□ 1.89
CNOT9-209ENST00000627282 HIRIP3Q9BW71 556 aaPredicted RBP26.84■■□□□ 1.89
CNOT9-209ENST00000627282 QRICH2Q9H0J4 1663 aa26.84■■□□□ 1.89
CNOT9-209ENST00000627282 ADGRB2O60241 1585 aa26.83■■□□□ 1.89
CNOT9-209ENST00000627282 ST20-MTHFSA0A0A6YYL1 179 aa26.83■■□□□ 1.88
CNOT9-209ENST00000627282 ORAI2Q96SN7 254 aa26.83■■□□□ 1.88
CNOT9-209ENST00000627282 FMN2Q9NZ56 1722 aa26.79■■□□□ 1.88
CNOT9-209ENST00000627282 DDX17Q92841 729 aaKnown RBP26.79■■□□□ 1.88
CNOT9-209ENST00000627282 SBNO2Q9Y2G9 1366 aa26.78■■□□□ 1.88
CNOT9-209ENST00000627282 SHPRHQ149N8 1683 aa26.78■■□□□ 1.88
CNOT9-209ENST00000627282 ILDR2Q71H61 639 aa26.78■■□□□ 1.88
CNOT9-209ENST00000627282 TESK2Q96S53 571 aa26.78■■□□□ 1.88
CNOT9-209ENST00000627282 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
CNOT9-209ENST00000627282 EIF4G2P78344 907 aaKnown RBP eCLIP26.76■■□□□ 1.87
CNOT9-209ENST00000627282 WASLO00401 505 aaPredicted RBP26.76■■□□□ 1.87
CNOT9-209ENST00000627282 HSPA5P11021 654 aaKnown RBP26.76■■□□□ 1.87
CNOT9-209ENST00000627282 ESCO1Q5FWF5 840 aa26.76■■□□□ 1.87
CNOT9-209ENST00000627282 SPATA31A6Q5VVP1 1343 aa26.75■■□□□ 1.87
CNOT9-209ENST00000627282 TULP4Q9NRJ4 1543 aa26.74■■□□□ 1.87
CNOT9-209ENST00000627282 NUTM2FA1L443 756 aa26.74■■□□□ 1.87
CNOT9-209ENST00000627282 LRRC59Q96AG4 307 aaKnown RBP26.74■■□□□ 1.87
CNOT9-209ENST00000627282 SOS2Q07890 1332 aaPredicted RBP26.72■■□□□ 1.87
CNOT9-209ENST00000627282 CDK19Q9BWU1 502 aa26.72■■□□□ 1.87
CNOT9-209ENST00000627282 NPHP3Q7Z494 1330 aa26.7■■□□□ 1.86
CNOT9-209ENST00000627282 LRP6O75581 1613 aa26.69■■□□□ 1.86
CNOT9-209ENST00000627282 EVC2Q86UK5 1308 aa26.69■■□□□ 1.86
CNOT9-209ENST00000627282 PRR36Q9H6K5 1346 aa26.68■■□□□ 1.86
CNOT9-209ENST00000627282 USP32Q8NFA0 1604 aa26.67■■□□□ 1.86
CNOT9-209ENST00000627282 PNPLA6Q8IY17 1366 aa26.67■■□□□ 1.86
CNOT9-209ENST00000627282 KIF1AQ12756 1690 aa26.67■■□□□ 1.86
CNOT9-209ENST00000627282 ANKARQ7Z5J8 1434 aa26.66■■□□□ 1.86
CNOT9-209ENST00000627282 FOXO3O43524 673 aa26.66■■□□□ 1.86
CNOT9-209ENST00000627282 CABP2Q9NPB3 220 aa26.66■■□□□ 1.86
CNOT9-209ENST00000627282 PXDNQ92626 1479 aa26.66■■□□□ 1.86
CNOT9-209ENST00000627282 ATP7BP35670 1465 aa26.65■■□□□ 1.86
CNOT9-209ENST00000627282 RGS17Q9UGC6 210 aaPredicted RBP26.65■■□□□ 1.86
CNOT9-209ENST00000627282 SRPK2P78362 688 aaKnown RBP26.65■■□□□ 1.86
CNOT9-209ENST00000627282 RGPD8O14715 1765 aaPredicted RBP26.64■■□□□ 1.85
CNOT9-209ENST00000627282 SLC24A1O60721 1099 aa26.62■■□□□ 1.85
CNOT9-209ENST00000627282 NUDT16Q96DE0 195 aaKnown RBP26.62■■□□□ 1.85
CNOT9-209ENST00000627282 MIER1Q8N108 512 aa26.61■■□□□ 1.85
CNOT9-209ENST00000627282 PHF8Q9UPP1 1060 aa26.61■■□□□ 1.85
CNOT9-209ENST00000627282 TMF1P82094 1093 aa26.61■■□□□ 1.85
CNOT9-209ENST00000627282 NUTM2BA6NNL0 878 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-209ENST00000627282 NUTM2EB1AL46 878 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-209ENST00000627282 XPCQ01831 940 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-209ENST00000627282 NUTM2AQ8IVF1 878 aaPredicted RBP26.6■■□□□ 1.85
CNOT9-209ENST00000627282 MEX3CQ5U5Q3 659 aaKnown RBP26.59■■□□□ 1.85
CNOT9-209ENST00000627282 CCDC61Q9Y6R9 512 aa26.57■■□□□ 1.84
CNOT9-209ENST00000627282 TOPAZ1Q8N9V7 1692 aa26.57■■□□□ 1.84
CNOT9-209ENST00000627282 PUS7Q96PZ0 661 aaKnown RBP26.56■■□□□ 1.84
CNOT9-209ENST00000627282 COL22A1Q8NFW1 1626 aaPredicted RBP26.56■■□□□ 1.84
CNOT9-209ENST00000627282 ATAD2Q6PL18 1390 aa26.55■■□□□ 1.84
CNOT9-209ENST00000627282 C11orf95C9JLR9 678 aaPredicted RBP26.54■■□□□ 1.84
CNOT9-209ENST00000627282 KRT28Q7Z3Y7 464 aa26.54■■□□□ 1.84
CNOT9-209ENST00000627282 PMFBP1Q8TBY8 1022 aa26.54■■□□□ 1.84
CNOT9-209ENST00000627282 ITSN1Q15811 1721 aa26.53■■□□□ 1.84
CNOT9-209ENST00000627282 PPIP5K1Q6PFW1 1433 aa26.52■■□□□ 1.84
CNOT9-209ENST00000627282 POTEAQ6S8J7 498 aa26.52■■□□□ 1.84
CNOT9-209ENST00000627282 SPATA31A3Q5VYP0 1347 aa26.52■■□□□ 1.84
CNOT9-209ENST00000627282 SOCS7O14512 581 aa26.51■■□□□ 1.83
CNOT9-209ENST00000627282 CABP1Q9NZU7 370 aa26.51■■□□□ 1.83
CNOT9-209ENST00000627282 PLEKHG3A1L390 1219 aa26.5■■□□□ 1.83
CNOT9-209ENST00000627282 CDCA8Q53HL2 280 aa26.5■■□□□ 1.83
CNOT9-209ENST00000627282 PSME1Q06323 249 aa26.5■■□□□ 1.83
CNOT9-209ENST00000627282 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
CNOT9-209ENST00000627282 SBNO1A3KN83 1393 aa26.48■■□□□ 1.83
CNOT9-209ENST00000627282 ZNF772Q68DY9 489 aaPredicted RBP26.47■■□□□ 1.83
CNOT9-209ENST00000627282 POLR3AO14802 1390 aaPredicted RBP26.46■■□□□ 1.83
CNOT9-209ENST00000627282 ADAMTS2O95450 1211 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms