RNA–Protein interactions for RNA: ENST00000627198.2

NRXN1-227, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-227	ENST00000627198	SPATA31A6	Q5VVP1	1343 aa		32.99	■■■□□ 2.87
NRXN1-227	ENST00000627198	STK26	Q9P289	416 aa		32.97	■■■□□ 2.87
NRXN1-227	ENST00000627198	DLC1	Q96QB1	1528 aa		32.96	■■■□□ 2.87
NRXN1-227	ENST00000627198	POTEA	Q6S8J7	498 aa		32.95	■■■□□ 2.87
NRXN1-227	ENST00000627198	CDC42BPG	Q6DT37	1551 aa		32.95	■■■□□ 2.86
NRXN1-227	ENST00000627198	SHPRH	Q149N8	1683 aa		32.94	■■■□□ 2.86
NRXN1-227	ENST00000627198	WAPL	Q7Z5K2	1190 aa		32.92	■■■□□ 2.86
NRXN1-227	ENST00000627198	PLEKHH1	Q9ULM0	1364 aa		32.92	■■■□□ 2.86
NRXN1-227	ENST00000627198	SIN3A	Q96ST3	1273 aa		32.91	■■■□□ 2.86
NRXN1-227	ENST00000627198	KIAA1210	Q9ULL0	1709 aa		32.91	■■■□□ 2.86
NRXN1-227	ENST00000627198	LRP6	O75581	1613 aa		32.9	■■■□□ 2.86
NRXN1-227	ENST00000627198	NHSL1	Q5SYE7	1610 aa		32.89	■■■□□ 2.86
NRXN1-227	ENST00000627198	C1orf167	Q5SNV9	1468 aa		32.89	■■■□□ 2.86
NRXN1-227	ENST00000627198	L3MBTL2	Q969R5	705 aa		32.85	■■■□□ 2.85
NRXN1-227	ENST00000627198	PRAM1	Q96QH2	718 aa		32.8	■■■□□ 2.84
NRXN1-227	ENST00000627198	LRRC59	Q96AG4	307 aa	Known RBP	32.79	■■■□□ 2.84
NRXN1-227	ENST00000627198	NEUROD1	Q13562	356 aa		32.77	■■■□□ 2.84
NRXN1-227	ENST00000627198	ADGRB2	O60241	1585 aa		32.77	■■■□□ 2.84
NRXN1-227	ENST00000627198	FMN2	Q9NZ56	1722 aa		32.77	■■■□□ 2.84
NRXN1-227	ENST00000627198	TRAK1	Q9UPV9	953 aa		32.76	■■■□□ 2.83
NRXN1-227	ENST00000627198	ZNF772	Q68DY9	489 aa	Predicted RBP	32.75	■■■□□ 2.83
NRXN1-227	ENST00000627198	MEX3C	Q5U5Q3	659 aa	Known RBP	32.74	■■■□□ 2.83
NRXN1-227	ENST00000627198	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.73	■■■□□ 2.83
NRXN1-227	ENST00000627198	ORAI2	Q96SN7	254 aa		32.72	■■■□□ 2.83
NRXN1-227	ENST00000627198	POGK	Q9P215	609 aa		32.71	■■■□□ 2.83
NRXN1-227	ENST00000627198	PNPLA6	Q8IY17	1366 aa		32.7	■■■□□ 2.83
NRXN1-227	ENST00000627198	NBPF1	Q3BBV0	1214 aa		32.7	■■■□□ 2.83
NRXN1-227	ENST00000627198	DDX17	Q92841	729 aa	Known RBP	32.69	■■■□□ 2.82
NRXN1-227	ENST00000627198	SOS2	Q07890	1332 aa	Predicted RBP	32.68	■■■□□ 2.82
NRXN1-227	ENST00000627198	TRPM1	Q7Z4N2	1603 aa		32.66	■■■□□ 2.82
NRXN1-227	ENST00000627198	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.65	■■■□□ 2.82
NRXN1-227	ENST00000627198	NUTM2E	B1AL46	878 aa	Predicted RBP	32.65	■■■□□ 2.82
NRXN1-227	ENST00000627198	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
NRXN1-227	ENST00000627198	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.65	■■■□□ 2.82
NRXN1-227	ENST00000627198	ANKAR	Q7Z5J8	1434 aa		32.63	■■■□□ 2.81
NRXN1-227	ENST00000627198	PCGF6	Q9BYE7	350 aa		32.63	■■■□□ 2.81
NRXN1-227	ENST00000627198	ESCO1	Q5FWF5	840 aa		32.62	■■■□□ 2.81
NRXN1-227	ENST00000627198	KIF1A	Q12756	1690 aa		32.6	■■■□□ 2.81
NRXN1-227	ENST00000627198	USP32	Q8NFA0	1604 aa		32.59	■■■□□ 2.81
NRXN1-227	ENST00000627198	TONSL	Q96HA7	1378 aa		32.58	■■■□□ 2.81
NRXN1-227	ENST00000627198	NPHP3	Q7Z494	1330 aa		32.58	■■■□□ 2.81
NRXN1-227	ENST00000627198	PXDN	Q92626	1479 aa		32.58	■■■□□ 2.81
NRXN1-227	ENST00000627198	EIF3A	Q14152	1382 aa	Known RBP	32.58	■■■□□ 2.81
NRXN1-227	ENST00000627198	GPRASP1	Q5JY77	1395 aa		32.58	■■■□□ 2.81
NRXN1-227	ENST00000627198	AFF2	P51816	1311 aa		32.57	■■■□□ 2.8
NRXN1-227	ENST00000627198	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.57	■■■□□ 2.8
NRXN1-227	ENST00000627198	NUTM2F	A1L443	756 aa		32.57	■■■□□ 2.8
NRXN1-227	ENST00000627198	NBPF8	Q3BBV2	869 aa		32.57	■■■□□ 2.8
NRXN1-227	ENST00000627198	CLSPN	Q9HAW4	1339 aa		32.56	■■■□□ 2.8
NRXN1-227	ENST00000627198	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.56	■■■□□ 2.8
NRXN1-227	ENST00000627198	WASL	O00401	505 aa	Predicted RBP	32.56	■■■□□ 2.8
NRXN1-227	ENST00000627198	TULP4	Q9NRJ4	1543 aa		32.56	■■■□□ 2.8
NRXN1-227	ENST00000627198	RGPD8	O14715	1765 aa	Predicted RBP	32.55	■■■□□ 2.8
NRXN1-227	ENST00000627198	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.54	■■■□□ 2.8
NRXN1-227	ENST00000627198	RXRB	P28702	533 aa		32.53	■■■□□ 2.8
NRXN1-227	ENST00000627198	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.52	■■■□□ 2.8
NRXN1-227	ENST00000627198	ROCK2	O75116	1388 aa	Known RBP	32.51	■■■□□ 2.79
NRXN1-227	ENST00000627198	FOXO3	O43524	673 aa		32.51	■■■□□ 2.79
NRXN1-227	ENST00000627198	PHF8	Q9UPP1	1060 aa		32.51	■■■□□ 2.79
NRXN1-227	ENST00000627198	PRR36	Q9H6K5	1346 aa		32.5	■■■□□ 2.79
NRXN1-227	ENST00000627198	C8orf37	Q96NL8	207 aa		32.49	■■■□□ 2.79
NRXN1-227	ENST00000627198	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.49	■■■□□ 2.79
NRXN1-227	ENST00000627198	RALGAPB	Q86X10	1494 aa		32.48	■■■□□ 2.79
NRXN1-227	ENST00000627198	ATP7B	P35670	1465 aa		32.45	■■■□□ 2.79
NRXN1-227	ENST00000627198	QRICH2	Q9H0J4	1663 aa		32.43	■■■□□ 2.78
NRXN1-227	ENST00000627198	ADAMTS2	O95450	1211 aa		32.42	■■■□□ 2.78
NRXN1-227	ENST00000627198	RBM6	P78332	1123 aa	Known RBP	32.41	■■■□□ 2.78
NRXN1-227	ENST00000627198	NGLY1	Q96IV0	654 aa		32.41	■■■□□ 2.78
NRXN1-227	ENST00000627198	CDK19	Q9BWU1	502 aa		32.41	■■■□□ 2.78
NRXN1-227	ENST00000627198	QTRT2	Q9H974	415 aa	Known RBP	32.41	■■■□□ 2.78
NRXN1-227	ENST00000627198	TIMELESS	Q9UNS1	1208 aa		32.41	■■■□□ 2.78
NRXN1-227	ENST00000627198	KRT28	Q7Z3Y7	464 aa		32.39	■■■□□ 2.78
NRXN1-227	ENST00000627198	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.39	■■■□□ 2.78
NRXN1-227	ENST00000627198	SPATA31A3	Q5VYP0	1347 aa		32.39	■■■□□ 2.78
NRXN1-227	ENST00000627198	SBNO1	A3KN83	1393 aa		32.39	■■■□□ 2.78
NRXN1-227	ENST00000627198	ITSN1	Q15811	1721 aa		32.39	■■■□□ 2.78
NRXN1-227	ENST00000627198	TOPAZ1	Q8N9V7	1692 aa		32.38	■■■□□ 2.77
NRXN1-227	ENST00000627198	XPC	Q01831	940 aa	Predicted RBP	32.38	■■■□□ 2.77
NRXN1-227	ENST00000627198	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.38	■■■□□ 2.77
NRXN1-227	ENST00000627198	NUDT16	Q96DE0	195 aa	Known RBP	32.38	■■■□□ 2.77
NRXN1-227	ENST00000627198	PSME1	Q06323	249 aa		32.35	■■■□□ 2.77
NRXN1-227	ENST00000627198	PMFBP1	Q8TBY8	1022 aa		32.34	■■■□□ 2.77
NRXN1-227	ENST00000627198	RGS12	O14924	1447 aa		32.34	■■■□□ 2.77
NRXN1-227	ENST00000627198	TNS3	Q68CZ2	1445 aa		32.34	■■■□□ 2.77
NRXN1-227	ENST00000627198	SBNO2	Q9Y2G9	1366 aa		32.33	■■■□□ 2.77
NRXN1-227	ENST00000627198	CARD11	Q9BXL7	1154 aa		32.33	■■■□□ 2.77
NRXN1-227	ENST00000627198	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.32	■■■□□ 2.76
NRXN1-227	ENST00000627198	USP21	Q9UK80	565 aa		32.32	■■■□□ 2.76
NRXN1-227	ENST00000627198	CCDC61	Q9Y6R9	512 aa		32.32	■■■□□ 2.76
NRXN1-227	ENST00000627198	POLR3A	O14802	1390 aa	Predicted RBP	32.31	■■■□□ 2.76
NRXN1-227	ENST00000627198	PLEKHG3	A1L390	1219 aa		32.3	■■■□□ 2.76
NRXN1-227	ENST00000627198	TRPC5	Q9UL62	973 aa	Predicted RBP	32.29	■■■□□ 2.76
NRXN1-227	ENST00000627198	ATRN	O75882	1429 aa		32.28	■■■□□ 2.76
NRXN1-227	ENST00000627198	MARF1	Q9Y4F3	1742 aa	Known RBP	32.27	■■■□□ 2.76
NRXN1-227	ENST00000627198	ARHGEF10	O15013	1369 aa		32.26	■■■□□ 2.75
NRXN1-227	ENST00000627198	EVC2	Q86UK5	1308 aa		32.26	■■■□□ 2.75
NRXN1-227	ENST00000627198	BCL9L	Q86UU0	1499 aa		32.25	■■■□□ 2.75
NRXN1-227	ENST00000627198	ALS2	Q96Q42	1657 aa		32.24	■■■□□ 2.75
NRXN1-227	ENST00000627198	NGDN	Q8NEJ9	315 aa	Known RBP	32.24	■■■□□ 2.75
NRXN1-227	ENST00000627198	SRPK2	P78362	688 aa	Known RBP	32.23	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms