RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
UBE3D-208ENST00000626828 SAFB2Q14151 953 aaKnown RBP eCLIP24.06■■□□□ 1.44
UBE3D-208ENST00000626828 DLC1Q96QB1 1528 aa24.05■■□□□ 1.44
UBE3D-208ENST00000626828 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
UBE3D-208ENST00000626828 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
UBE3D-208ENST00000626828 PHLPP1O60346 1717 aa24.03■■□□□ 1.44
UBE3D-208ENST00000626828 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
UBE3D-208ENST00000626828 ESCO1Q5FWF5 840 aa24.02■■□□□ 1.44
UBE3D-208ENST00000626828 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
UBE3D-208ENST00000626828 NUTM2FA1L443 756 aa24■■□□□ 1.43
UBE3D-208ENST00000626828 LRRC59Q96AG4 307 aaKnown RBP24■■□□□ 1.43
UBE3D-208ENST00000626828 CDC42BPGQ6DT37 1551 aa23.99■■□□□ 1.43
UBE3D-208ENST00000626828 JCADQ9P266 1359 aa23.99■■□□□ 1.43
UBE3D-208ENST00000626828 AHDC1Q5TGY3 1603 aaPredicted RBP23.99■■□□□ 1.43
UBE3D-208ENST00000626828 TONSLQ96HA7 1378 aa23.98■■□□□ 1.43
UBE3D-208ENST00000626828 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
UBE3D-208ENST00000626828 MINK1Q8N4C8 1332 aaPredicted RBP23.96■■□□□ 1.43
UBE3D-208ENST00000626828 HIRIP3Q9BW71 556 aaPredicted RBP23.94■■□□□ 1.42
UBE3D-208ENST00000626828 COL16A1Q07092 1604 aaPredicted RBP23.93■■□□□ 1.42
UBE3D-208ENST00000626828 WASLO00401 505 aaPredicted RBP23.93■■□□□ 1.42
UBE3D-208ENST00000626828 SOS2Q07890 1332 aaPredicted RBP23.92■■□□□ 1.42
UBE3D-208ENST00000626828 FOXO3O43524 673 aa23.92■■□□□ 1.42
UBE3D-208ENST00000626828 NBPF8Q3BBV2 869 aa23.92■■□□□ 1.42
UBE3D-208ENST00000626828 NPHP3Q7Z494 1330 aa23.91■■□□□ 1.42
UBE3D-208ENST00000626828 CLSPNQ9HAW4 1339 aa23.91■■□□□ 1.42
UBE3D-208ENST00000626828 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
UBE3D-208ENST00000626828 SPATA31A6Q5VVP1 1343 aa23.9■■□□□ 1.42
UBE3D-208ENST00000626828 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
UBE3D-208ENST00000626828 NHSL1Q5SYE7 1610 aa23.9■■□□□ 1.42
UBE3D-208ENST00000626828 MED1Q15648 1581 aaPredicted RBP23.9■■□□□ 1.42
UBE3D-208ENST00000626828 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.41
UBE3D-208ENST00000626828 ROCK2O75116 1388 aaKnown RBP23.88■■□□□ 1.41
UBE3D-208ENST00000626828 EIF3AQ14152 1382 aaKnown RBP23.88■■□□□ 1.41
UBE3D-208ENST00000626828 ARHGEF28Q8N1W1 1705 aaKnown RBP23.87■■□□□ 1.41
UBE3D-208ENST00000626828 CENPJQ9HC77 1338 aaPredicted RBP23.86■■□□□ 1.41
UBE3D-208ENST00000626828 CDK19Q9BWU1 502 aa23.86■■□□□ 1.41
UBE3D-208ENST00000626828 TIMELESSQ9UNS1 1208 aa23.86■■□□□ 1.41
UBE3D-208ENST00000626828 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
UBE3D-208ENST00000626828 ADGRB2O60241 1585 aa23.85■■□□□ 1.41
UBE3D-208ENST00000626828 TRPM1Q7Z4N2 1603 aa23.84■■□□□ 1.41
UBE3D-208ENST00000626828 RGPD8O14715 1765 aaPredicted RBP23.84■■□□□ 1.41
UBE3D-208ENST00000626828 PSME1Q06323 249 aa23.84■■□□□ 1.41
UBE3D-208ENST00000626828 KRT28Q7Z3Y7 464 aa23.84■■□□□ 1.41
UBE3D-208ENST00000626828 XPCQ01831 940 aaPredicted RBP23.82■■□□□ 1.4
UBE3D-208ENST00000626828 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
UBE3D-208ENST00000626828 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
UBE3D-208ENST00000626828 NUDT16Q96DE0 195 aaKnown RBP23.82■■□□□ 1.4
UBE3D-208ENST00000626828 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
UBE3D-208ENST00000626828 SHPRHQ149N8 1683 aa23.81■■□□□ 1.4
UBE3D-208ENST00000626828 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
UBE3D-208ENST00000626828 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
UBE3D-208ENST00000626828 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
UBE3D-208ENST00000626828 GPRASP1Q5JY77 1395 aa23.8■■□□□ 1.4
UBE3D-208ENST00000626828 PNPLA6Q8IY17 1366 aa23.8■■□□□ 1.4
UBE3D-208ENST00000626828 MEX3CQ5U5Q3 659 aaKnown RBP23.8■■□□□ 1.4
UBE3D-208ENST00000626828 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
UBE3D-208ENST00000626828 KIF1AQ12756 1690 aa23.78■■□□□ 1.4
UBE3D-208ENST00000626828 TULP4Q9NRJ4 1543 aa23.78■■□□□ 1.4
UBE3D-208ENST00000626828 ILDR2Q71H61 639 aa23.77■■□□□ 1.4
UBE3D-208ENST00000626828 CCDC61Q9Y6R9 512 aa23.77■■□□□ 1.4
UBE3D-208ENST00000626828 PXDNQ92626 1479 aa23.76■■□□□ 1.39
UBE3D-208ENST00000626828 SRPK2P78362 688 aaKnown RBP23.76■■□□□ 1.39
UBE3D-208ENST00000626828 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
UBE3D-208ENST00000626828 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
UBE3D-208ENST00000626828 USP32Q8NFA0 1604 aa23.75■■□□□ 1.39
UBE3D-208ENST00000626828 SPATA31A3Q5VYP0 1347 aa23.75■■□□□ 1.39
UBE3D-208ENST00000626828 EVC2Q86UK5 1308 aa23.73■■□□□ 1.39
UBE3D-208ENST00000626828 RALGAPBQ86X10 1494 aa23.73■■□□□ 1.39
UBE3D-208ENST00000626828 PLEKHG3A1L390 1219 aa23.72■■□□□ 1.39
UBE3D-208ENST00000626828 CABP2Q9NPB3 220 aa23.72■■□□□ 1.39
UBE3D-208ENST00000626828 LRP6O75581 1613 aa23.71■■□□□ 1.39
UBE3D-208ENST00000626828 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
UBE3D-208ENST00000626828 LMOD2Q6P5Q4 547 aa23.69■■□□□ 1.38
UBE3D-208ENST00000626828 ATP7BP35670 1465 aa23.68■■□□□ 1.38
UBE3D-208ENST00000626828 QRICH2Q9H0J4 1663 aa23.68■■□□□ 1.38
UBE3D-208ENST00000626828 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
UBE3D-208ENST00000626828 ZNF772Q68DY9 489 aaPredicted RBP23.68■■□□□ 1.38
UBE3D-208ENST00000626828 ACEP12821 1306 aa23.66■■□□□ 1.38
UBE3D-208ENST00000626828 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
UBE3D-208ENST00000626828 POTEAQ6S8J7 498 aa23.66■■□□□ 1.38
UBE3D-208ENST00000626828 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
UBE3D-208ENST00000626828 ITSN1Q15811 1721 aa23.65■■□□□ 1.38
UBE3D-208ENST00000626828 C8orf37Q96NL8 207 aa23.65■■□□□ 1.38
UBE3D-208ENST00000626828 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
UBE3D-208ENST00000626828 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.37
UBE3D-208ENST00000626828 CABP1Q9NZU7 370 aa23.64■■□□□ 1.37
UBE3D-208ENST00000626828 TNS3Q68CZ2 1445 aa23.64■■□□□ 1.37
UBE3D-208ENST00000626828 COL22A1Q8NFW1 1626 aaPredicted RBP23.63■■□□□ 1.37
UBE3D-208ENST00000626828 POLR3AO14802 1390 aaPredicted RBP23.63■■□□□ 1.37
UBE3D-208ENST00000626828 SBNO2Q9Y2G9 1366 aa23.63■■□□□ 1.37
UBE3D-208ENST00000626828 AFF2P51816 1311 aa23.61■■□□□ 1.37
UBE3D-208ENST00000626828 ST20-MTHFSA0A0A6YYL1 179 aa23.61■■□□□ 1.37
UBE3D-208ENST00000626828 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
UBE3D-208ENST00000626828 PPIP5K1Q6PFW1 1433 aa23.6■■□□□ 1.37
UBE3D-208ENST00000626828 CABLES1Q8TDN4 633 aa23.59■■□□□ 1.37
UBE3D-208ENST00000626828 PUS7Q96PZ0 661 aaKnown RBP23.58■■□□□ 1.37
UBE3D-208ENST00000626828 ZNF692Q9BU19 519 aaPredicted RBP23.58■■□□□ 1.37
UBE3D-208ENST00000626828 PLEKHG5O94827 1062 aa23.57■■□□□ 1.36
UBE3D-208ENST00000626828 FNBP4Q8N3X1 1017 aaPredicted RBP23.57■■□□□ 1.36
UBE3D-208ENST00000626828 ATAD2Q6PL18 1390 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms