RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
NELFE-214ENST00000625905 HSPA1LP34931 641 aa13.25□□□□□ -0.29
NELFE-214ENST00000625905 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
NELFE-214ENST00000625905 SIRT1Q96EB6 747 aa13.24□□□□□ -0.29
NELFE-214ENST00000625905 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
NELFE-214ENST00000625905 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
NELFE-214ENST00000625905 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
NELFE-214ENST00000625905 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
NELFE-214ENST00000625905 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
NELFE-214ENST00000625905 POGKQ9P215 609 aa13.23□□□□□ -0.29
NELFE-214ENST00000625905 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
NELFE-214ENST00000625905 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
NELFE-214ENST00000625905 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
NELFE-214ENST00000625905 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
NELFE-214ENST00000625905 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.29
NELFE-214ENST00000625905 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
NELFE-214ENST00000625905 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.3
NELFE-214ENST00000625905 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.3
NELFE-214ENST00000625905 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
NELFE-214ENST00000625905 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
NELFE-214ENST00000625905 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
NELFE-214ENST00000625905 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
NELFE-214ENST00000625905 EIF3AQ14152 1382 aaKnown RBP13.18□□□□□ -0.3
NELFE-214ENST00000625905 MINK1Q8N4C8 1332 aaPredicted RBP13.17□□□□□ -0.3
NELFE-214ENST00000625905 NBPF8Q3BBV2 869 aa13.17□□□□□ -0.3
NELFE-214ENST00000625905 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
NELFE-214ENST00000625905 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
NELFE-214ENST00000625905 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
NELFE-214ENST00000625905 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
NELFE-214ENST00000625905 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
NELFE-214ENST00000625905 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
NELFE-214ENST00000625905 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
NELFE-214ENST00000625905 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
NELFE-214ENST00000625905 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
NELFE-214ENST00000625905 ORAI2Q96SN7 254 aa13.14□□□□□ -0.31
NELFE-214ENST00000625905 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
NELFE-214ENST00000625905 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
NELFE-214ENST00000625905 SHPRHQ149N8 1683 aa13.13□□□□□ -0.31
NELFE-214ENST00000625905 JCADQ9P266 1359 aa13.13□□□□□ -0.31
NELFE-214ENST00000625905 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
NELFE-214ENST00000625905 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
NELFE-214ENST00000625905 NPHP3Q7Z494 1330 aa13.12□□□□□ -0.31
NELFE-214ENST00000625905 ATP7BP35670 1465 aa13.11□□□□□ -0.31
NELFE-214ENST00000625905 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
NELFE-214ENST00000625905 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
NELFE-214ENST00000625905 TOPAZ1Q8N9V7 1692 aa13.11□□□□□ -0.31
NELFE-214ENST00000625905 PXDNQ92626 1479 aa13.1□□□□□ -0.31
NELFE-214ENST00000625905 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
NELFE-214ENST00000625905 FOXO3O43524 673 aa13.08□□□□□ -0.32
NELFE-214ENST00000625905 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
NELFE-214ENST00000625905 SOS2Q07890 1332 aaPredicted RBP13.08□□□□□ -0.32
NELFE-214ENST00000625905 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
NELFE-214ENST00000625905 SPATA31A6Q5VVP1 1343 aa13.07□□□□□ -0.32
NELFE-214ENST00000625905 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
NELFE-214ENST00000625905 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
NELFE-214ENST00000625905 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
NELFE-214ENST00000625905 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
NELFE-214ENST00000625905 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
NELFE-214ENST00000625905 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
NELFE-214ENST00000625905 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
NELFE-214ENST00000625905 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
NELFE-214ENST00000625905 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
NELFE-214ENST00000625905 LRP6O75581 1613 aa13.05□□□□□ -0.32
NELFE-214ENST00000625905 USP47Q96K76 1375 aa13.05□□□□□ -0.32
NELFE-214ENST00000625905 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
NELFE-214ENST00000625905 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
NELFE-214ENST00000625905 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
NELFE-214ENST00000625905 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
NELFE-214ENST00000625905 PPIP5K1Q6PFW1 1433 aa13.03□□□□□ -0.32
NELFE-214ENST00000625905 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
NELFE-214ENST00000625905 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
NELFE-214ENST00000625905 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
NELFE-214ENST00000625905 PSME1Q06323 249 aa13.01□□□□□ -0.33
NELFE-214ENST00000625905 MEX3CQ5U5Q3 659 aaKnown RBP13.01□□□□□ -0.33
NELFE-214ENST00000625905 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
NELFE-214ENST00000625905 ATAD2Q6PL18 1390 aa13.01□□□□□ -0.33
NELFE-214ENST00000625905 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
NELFE-214ENST00000625905 ARHGEF10O15013 1369 aa13□□□□□ -0.33
NELFE-214ENST00000625905 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
NELFE-214ENST00000625905 NUTM2BA6NNL0 878 aaPredicted RBP13□□□□□ -0.33
NELFE-214ENST00000625905 NUTM2EB1AL46 878 aaPredicted RBP13□□□□□ -0.33
NELFE-214ENST00000625905 NUTM2AQ8IVF1 878 aaPredicted RBP13□□□□□ -0.33
NELFE-214ENST00000625905 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
NELFE-214ENST00000625905 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
NELFE-214ENST00000625905 ACEP12821 1306 aa12.98□□□□□ -0.33
NELFE-214ENST00000625905 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
NELFE-214ENST00000625905 PLEKHG3A1L390 1219 aa12.97□□□□□ -0.33
NELFE-214ENST00000625905 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
NELFE-214ENST00000625905 TESK2Q96S53 571 aa12.97□□□□□ -0.33
NELFE-214ENST00000625905 AKAP12Q02952 1782 aa12.96□□□□□ -0.34
NELFE-214ENST00000625905 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.34
NELFE-214ENST00000625905 USP6P35125 1406 aa12.96□□□□□ -0.34
NELFE-214ENST00000625905 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
NELFE-214ENST00000625905 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
NELFE-214ENST00000625905 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
NELFE-214ENST00000625905 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
NELFE-214ENST00000625905 NRKQ7Z2Y5 1582 aa12.94□□□□□ -0.34
NELFE-214ENST00000625905 MON2Q7Z3U7 1717 aa12.94□□□□□ -0.34
NELFE-214ENST00000625905 CRYBG1Q9Y4K1 1723 aa12.94□□□□□ -0.34
NELFE-214ENST00000625905 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms