RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
DDX41-218ENST00000625286 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
DDX41-218ENST00000625286 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
DDX41-218ENST00000625286 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
DDX41-218ENST00000625286 RGL3Q3MIN7 710 aa16.65■□□□□ 0.26
DDX41-218ENST00000625286 ESCO1Q5FWF5 840 aa16.65■□□□□ 0.26
DDX41-218ENST00000625286 USP21Q9UK80 565 aa16.65■□□□□ 0.26
DDX41-218ENST00000625286 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
DDX41-218ENST00000625286 PXDNQ92626 1479 aa16.65■□□□□ 0.26
DDX41-218ENST00000625286 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.26
DDX41-218ENST00000625286 FOXO3O43524 673 aa16.64■□□□□ 0.25
DDX41-218ENST00000625286 TMEM132EQ6IEE7 984 aa16.64■□□□□ 0.25
DDX41-218ENST00000625286 STK26Q9P289 416 aa16.64■□□□□ 0.25
DDX41-218ENST00000625286 EP400Q96L91 3159 aa16.64■□□□□ 0.25
DDX41-218ENST00000625286 MYOM2P54296 1465 aa16.63■□□□□ 0.25
DDX41-218ENST00000625286 NUTM2FA1L443 756 aa16.63■□□□□ 0.25
DDX41-218ENST00000625286 CDC42BPGQ6DT37 1551 aa16.63■□□□□ 0.25
DDX41-218ENST00000625286 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
DDX41-218ENST00000625286 TECPR2O15040 1411 aa16.62■□□□□ 0.25
DDX41-218ENST00000625286 ATRNO75882 1429 aa16.62■□□□□ 0.25
DDX41-218ENST00000625286 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
DDX41-218ENST00000625286 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
DDX41-218ENST00000625286 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
DDX41-218ENST00000625286 NPHP3Q7Z494 1330 aa16.6■□□□□ 0.25
DDX41-218ENST00000625286 LRPPRCP42704 1394 aaKnown RBP16.6■□□□□ 0.25
DDX41-218ENST00000625286 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
DDX41-218ENST00000625286 CCDC144AA2RUR9 1427 aa16.59■□□□□ 0.25
DDX41-218ENST00000625286 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
DDX41-218ENST00000625286 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
DDX41-218ENST00000625286 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
DDX41-218ENST00000625286 ATAD2Q6PL18 1390 aa16.55■□□□□ 0.24
DDX41-218ENST00000625286 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
DDX41-218ENST00000625286 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
DDX41-218ENST00000625286 KNDC1Q76NI1 1749 aa16.54■□□□□ 0.24
DDX41-218ENST00000625286 FMN2Q9NZ56 1722 aa16.54■□□□□ 0.24
DDX41-218ENST00000625286 SPATA31A3Q5VYP0 1347 aa16.54■□□□□ 0.24
DDX41-218ENST00000625286 GJD4Q96KN9 370 aaPredicted RBP16.53■□□□□ 0.24
DDX41-218ENST00000625286 C14orf93Q9H972 538 aaKnown RBP16.53■□□□□ 0.24
DDX41-218ENST00000625286 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
DDX41-218ENST00000625286 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.24
DDX41-218ENST00000625286 SIRT1Q96EB6 747 aa16.52■□□□□ 0.24
DDX41-218ENST00000625286 SLIT2O94813 1529 aa16.5■□□□□ 0.23
DDX41-218ENST00000625286 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
DDX41-218ENST00000625286 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
DDX41-218ENST00000625286 GLI3P10071 1580 aa16.5■□□□□ 0.23
DDX41-218ENST00000625286 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
DDX41-218ENST00000625286 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
DDX41-218ENST00000625286 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
DDX41-218ENST00000625286 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
DDX41-218ENST00000625286 PHF8Q9UPP1 1060 aa16.47■□□□□ 0.23
DDX41-218ENST00000625286 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
DDX41-218ENST00000625286 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
DDX41-218ENST00000625286 PRAM1Q96QH2 718 aa16.46■□□□□ 0.23
DDX41-218ENST00000625286 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
DDX41-218ENST00000625286 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
DDX41-218ENST00000625286 DHX57Q6P158 1386 aaKnown RBP16.44■□□□□ 0.22
DDX41-218ENST00000625286 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
DDX41-218ENST00000625286 FAM83GA6ND36 823 aa16.43■□□□□ 0.22
DDX41-218ENST00000625286 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
DDX41-218ENST00000625286 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
DDX41-218ENST00000625286 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
DDX41-218ENST00000625286 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
DDX41-218ENST00000625286 SBNO1A3KN83 1393 aa16.41■□□□□ 0.22
DDX41-218ENST00000625286 PSME1Q06323 249 aa16.41■□□□□ 0.22
DDX41-218ENST00000625286 VPS72Q15906 364 aa16.41■□□□□ 0.22
DDX41-218ENST00000625286 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
DDX41-218ENST00000625286 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
DDX41-218ENST00000625286 ABCA3Q99758 1704 aa16.41■□□□□ 0.22
DDX41-218ENST00000625286 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
DDX41-218ENST00000625286 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
DDX41-218ENST00000625286 PLCH1Q4KWH8 1693 aa16.4■□□□□ 0.22
DDX41-218ENST00000625286 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
DDX41-218ENST00000625286 HIRIP3Q9BW71 556 aaPredicted RBP16.39■□□□□ 0.21
DDX41-218ENST00000625286 DLC1Q96QB1 1528 aa16.39■□□□□ 0.21
DDX41-218ENST00000625286 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
DDX41-218ENST00000625286 POGKQ9P215 609 aa16.38■□□□□ 0.21
DDX41-218ENST00000625286 TRAK1Q9UPV9 953 aa16.38■□□□□ 0.21
DDX41-218ENST00000625286 BLMP54132 1417 aaPredicted RBP16.37■□□□□ 0.21
DDX41-218ENST00000625286 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
DDX41-218ENST00000625286 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
DDX41-218ENST00000625286 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
DDX41-218ENST00000625286 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
DDX41-218ENST00000625286 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
DDX41-218ENST00000625286 MINK1Q8N4C8 1332 aaPredicted RBP16.36■□□□□ 0.21
DDX41-218ENST00000625286 KDM2AQ9Y2K7 1162 aa16.35■□□□□ 0.21
DDX41-218ENST00000625286 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
DDX41-218ENST00000625286 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
DDX41-218ENST00000625286 KRT27Q7Z3Y8 459 aa16.33■□□□□ 0.2
DDX41-218ENST00000625286 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
DDX41-218ENST00000625286 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
DDX41-218ENST00000625286 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
DDX41-218ENST00000625286 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
DDX41-218ENST00000625286 WASLO00401 505 aaPredicted RBP16.32■□□□□ 0.2
DDX41-218ENST00000625286 BTG4Q9NY30 223 aa16.32■□□□□ 0.2
DDX41-218ENST00000625286 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
DDX41-218ENST00000625286 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
DDX41-218ENST00000625286 CRYBG1Q9Y4K1 1723 aa16.3■□□□□ 0.2
DDX41-218ENST00000625286 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
DDX41-218ENST00000625286 GPRASP1Q5JY77 1395 aa16.27■□□□□ 0.2
DDX41-218ENST00000625286 SPATA31A5Q5VU36 1347 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms