RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 RBM6P78332 1123 aaKnown RBP28.33■■■□□ 2.13
SMN1-211ENST00000625245 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
SMN1-211ENST00000625245 MPHOSPH9Q99550 1183 aa28.32■■■□□ 2.12
SMN1-211ENST00000625245 WAPLQ7Z5K2 1190 aa28.28■■■□□ 2.12
SMN1-211ENST00000625245 ANKRD30BQ9BXX2 1392 aa28.26■■■□□ 2.12
SMN1-211ENST00000625245 NUTM2FA1L443 756 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 TMEM132EQ6IEE7 984 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 RGS12O14924 1447 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 NPHP3Q7Z494 1330 aa28.25■■■□□ 2.11
SMN1-211ENST00000625245 USP21Q9UK80 565 aa28.25■■■□□ 2.11
SMN1-211ENST00000625245 CDC42BPGQ6DT37 1551 aa28.24■■■□□ 2.11
SMN1-211ENST00000625245 IFT172Q9UG01 1749 aa28.24■■■□□ 2.11
SMN1-211ENST00000625245 XPCQ01831 940 aaPredicted RBP28.24■■■□□ 2.11
SMN1-211ENST00000625245 FOXO3O43524 673 aa28.23■■■□□ 2.11
SMN1-211ENST00000625245 LRPPRCP42704 1394 aaKnown RBP28.23■■■□□ 2.11
SMN1-211ENST00000625245 TRPC5Q9UL62 973 aaPredicted RBP28.19■■■□□ 2.1
SMN1-211ENST00000625245 ABCC11Q96J66 1382 aa28.19■■■□□ 2.1
SMN1-211ENST00000625245 PLEKHH1Q9ULM0 1364 aa28.19■■■□□ 2.1
SMN1-211ENST00000625245 TECPR2O15040 1411 aa28.18■■■□□ 2.1
SMN1-211ENST00000625245 COL22A1Q8NFW1 1626 aaPredicted RBP28.18■■■□□ 2.1
SMN1-211ENST00000625245 FNBP4Q8N3X1 1017 aaPredicted RBP28.17■■■□□ 2.1
SMN1-211ENST00000625245 PXDNQ92626 1479 aa28.16■■■□□ 2.1
SMN1-211ENST00000625245 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
SMN1-211ENST00000625245 KNDC1Q76NI1 1749 aa28.15■■■□□ 2.1
SMN1-211ENST00000625245 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.1
SMN1-211ENST00000625245 MYOM2P54296 1465 aa28.13■■■□□ 2.09
SMN1-211ENST00000625245 ATRNO75882 1429 aa28.1■■■□□ 2.09
SMN1-211ENST00000625245 FMN2Q9NZ56 1722 aa28.1■■■□□ 2.09
SMN1-211ENST00000625245 MARF1Q9Y4F3 1742 aaKnown RBP28.1■■■□□ 2.09
SMN1-211ENST00000625245 C14orf93Q9H972 538 aaKnown RBP28.1■■■□□ 2.09
SMN1-211ENST00000625245 CFAP70Q5T0N1 1121 aa28.09■■■□□ 2.09
SMN1-211ENST00000625245 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
SMN1-211ENST00000625245 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
SMN1-211ENST00000625245 KRT28Q7Z3Y7 464 aa28.06■■■□□ 2.08
SMN1-211ENST00000625245 SIRT1Q96EB6 747 aa28.06■■■□□ 2.08
SMN1-211ENST00000625245 DHX57Q6P158 1386 aaKnown RBP28.06■■■□□ 2.08
SMN1-211ENST00000625245 RGPD8O14715 1765 aaPredicted RBP28.06■■■□□ 2.08
SMN1-211ENST00000625245 SAFB2Q14151 953 aaKnown RBP eCLIP28.05■■■□□ 2.08
SMN1-211ENST00000625245 BCL9LQ86UU0 1499 aa28.05■■■□□ 2.08
SMN1-211ENST00000625245 KIF1AQ12756 1690 aa28.04■■■□□ 2.08
SMN1-211ENST00000625245 SPATA31A3Q5VYP0 1347 aa28.04■■■□□ 2.08
SMN1-211ENST00000625245 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
SMN1-211ENST00000625245 PLEKHG5O94827 1062 aa28.01■■■□□ 2.07
SMN1-211ENST00000625245 PRAM1Q96QH2 718 aa28.01■■■□□ 2.07
SMN1-211ENST00000625245 HAP1P54257 671 aaPredicted RBP28■■■□□ 2.07
SMN1-211ENST00000625245 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
SMN1-211ENST00000625245 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
SMN1-211ENST00000625245 PSME1Q06323 249 aa27.99■■■□□ 2.07
SMN1-211ENST00000625245 POGKQ9P215 609 aa27.99■■■□□ 2.07
SMN1-211ENST00000625245 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
SMN1-211ENST00000625245 LMOD2Q6P5Q4 547 aa27.97■■■□□ 2.07
SMN1-211ENST00000625245 UNC5CLQ8IV45 518 aa27.97■■■□□ 2.07
SMN1-211ENST00000625245 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
SMN1-211ENST00000625245 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
SMN1-211ENST00000625245 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.93■■■□□ 2.06
SMN1-211ENST00000625245 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 SLIT2O94813 1529 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 TRAK1Q9UPV9 953 aa27.9■■■□□ 2.06
SMN1-211ENST00000625245 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
SMN1-211ENST00000625245 DLC1Q96QB1 1528 aa27.88■■■□□ 2.05
SMN1-211ENST00000625245 HIRIP3Q9BW71 556 aaPredicted RBP27.88■■■□□ 2.05
SMN1-211ENST00000625245 SBNO1A3KN83 1393 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 GLI3P10071 1580 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 DCAF11Q8TEB1 546 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 CCDC9Q9Y3X0 531 aaKnown RBP27.86■■■□□ 2.05
SMN1-211ENST00000625245 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
SMN1-211ENST00000625245 MINK1Q8N4C8 1332 aaPredicted RBP27.85■■■□□ 2.05
SMN1-211ENST00000625245 ARHGEF10O15013 1369 aa27.85■■■□□ 2.05
SMN1-211ENST00000625245 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
SMN1-211ENST00000625245 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
SMN1-211ENST00000625245 VPS72Q15906 364 aa27.82■■■□□ 2.04
SMN1-211ENST00000625245 BRWD3Q6RI45 1802 aa27.82■■■□□ 2.04
SMN1-211ENST00000625245 PLCH1Q4KWH8 1693 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 EP400Q96L91 3159 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 SEPT12Q8IYM1 358 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 ADGRB2O60241 1585 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 NWD2Q9ULI1 1742 aa27.79■■■□□ 2.04
SMN1-211ENST00000625245 FAM83GA6ND36 823 aa27.79■■■□□ 2.04
SMN1-211ENST00000625245 GPRASP1Q5JY77 1395 aa27.78■■■□□ 2.04
SMN1-211ENST00000625245 EIF3AQ14152 1382 aaKnown RBP27.76■■■□□ 2.03
SMN1-211ENST00000625245 PRR36Q9H6K5 1346 aa27.76■■■□□ 2.03
SMN1-211ENST00000625245 WASLO00401 505 aaPredicted RBP27.76■■■□□ 2.03
SMN1-211ENST00000625245 NGDNQ8NEJ9 315 aaKnown RBP27.75■■■□□ 2.03
SMN1-211ENST00000625245 A0A0G2JS52 829 aa27.74■■■□□ 2.03
SMN1-211ENST00000625245 MYT1Q01538 1121 aa27.74■■■□□ 2.03
SMN1-211ENST00000625245 STAC3Q96MF2 364 aa27.74■■■□□ 2.03
SMN1-211ENST00000625245 TRPM3Q9HCF6 1732 aaPredicted RBP27.74■■■□□ 2.03
SMN1-211ENST00000625245 BLMP54132 1417 aaPredicted RBP27.74■■■□□ 2.03
SMN1-211ENST00000625245 SF3B2Q13435 895 aaKnown RBP27.73■■■□□ 2.03
SMN1-211ENST00000625245 TULP4Q9NRJ4 1543 aa27.72■■■□□ 2.03
SMN1-211ENST00000625245 PAK3O75914 559 aaPredicted RBP27.72■■■□□ 2.03
SMN1-211ENST00000625245 ONECUT3O60422 494 aaPredicted RBP27.71■■■□□ 2.03
SMN1-211ENST00000625245 BTG4Q9NY30 223 aa27.71■■■□□ 2.03
SMN1-211ENST00000625245 KRT27Q7Z3Y8 459 aa27.7■■■□□ 2.02
SMN1-211ENST00000625245 DEFB132Q7Z7B7 95 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms