RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
ATRX-216ENST00000624403 SETBP1Q9Y6X0 1596 aa14.31□□□□□ -0.12
ATRX-216ENST00000624403 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
ATRX-216ENST00000624403 EIF3AQ14152 1382 aaKnown RBP14.3□□□□□ -0.12
ATRX-216ENST00000624403 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
ATRX-216ENST00000624403 CLCN6P51797 869 aa14.29□□□□□ -0.12
ATRX-216ENST00000624403 ADGRB1O14514 1584 aa14.29□□□□□ -0.12
ATRX-216ENST00000624403 TMF1P82094 1093 aa14.28□□□□□ -0.12
ATRX-216ENST00000624403 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
ATRX-216ENST00000624403 CEBPAP49715 358 aaPredicted RBP14.27□□□□□ -0.13
ATRX-216ENST00000624403 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
ATRX-216ENST00000624403 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.13
ATRX-216ENST00000624403 RIMS2Q9UQ26 1411 aa14.26□□□□□ -0.13
ATRX-216ENST00000624403 CCER2I3L3R5 266 aa14.26□□□□□ -0.13
ATRX-216ENST00000624403 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
ATRX-216ENST00000624403 TMEM132EQ6IEE7 984 aa14.26□□□□□ -0.13
ATRX-216ENST00000624403 YTHDC1Q96MU7 727 aaKnown RBP14.25□□□□□ -0.13
ATRX-216ENST00000624403 C3P01024 1663 aa14.24□□□□□ -0.13
ATRX-216ENST00000624403 LHX8Q68G74 356 aa14.24□□□□□ -0.13
ATRX-216ENST00000624403 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 NUBP1P53384 320 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 ASXL1Q8IXJ9 1541 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 NLRP1Q9C000 1473 aa14.23□□□□□ -0.13
ATRX-216ENST00000624403 CENPJQ9HC77 1338 aaPredicted RBP14.21□□□□□ -0.13
ATRX-216ENST00000624403 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
ATRX-216ENST00000624403 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.21□□□□□ -0.13
ATRX-216ENST00000624403 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
ATRX-216ENST00000624403 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.14
ATRX-216ENST00000624403 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
ATRX-216ENST00000624403 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
ATRX-216ENST00000624403 SBNO2Q9Y2G9 1366 aa14.2□□□□□ -0.14
ATRX-216ENST00000624403 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
ATRX-216ENST00000624403 TMEM2Q9UHN6 1383 aa14.19□□□□□ -0.14
ATRX-216ENST00000624403 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
ATRX-216ENST00000624403 RIMS1Q86UR5 1692 aaKnown RBP14.17□□□□□ -0.14
ATRX-216ENST00000624403 HDGFP51858 240 aaKnown RBP14.17□□□□□ -0.14
ATRX-216ENST00000624403 DCBLD2Q96PD2 775 aa14.17□□□□□ -0.14
ATRX-216ENST00000624403 STK26Q9P289 416 aa14.17□□□□□ -0.14
ATRX-216ENST00000624403 PTPRMP28827 1452 aa14.17□□□□□ -0.14
ATRX-216ENST00000624403 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
ATRX-216ENST00000624403 YTHDC2Q9H6S0 1430 aaKnown RBP14.16□□□□□ -0.14
ATRX-216ENST00000624403 ARHGEF28Q8N1W1 1705 aaKnown RBP14.16□□□□□ -0.14
ATRX-216ENST00000624403 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
ATRX-216ENST00000624403 PANK3Q9H999 370 aa14.16□□□□□ -0.14
ATRX-216ENST00000624403 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
ATRX-216ENST00000624403 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
ATRX-216ENST00000624403 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
ATRX-216ENST00000624403 MS4A3Q96HJ5 214 aa14.14□□□□□ -0.15
ATRX-216ENST00000624403 SETD1AO15047 1707 aaKnown RBP14.14□□□□□ -0.15
ATRX-216ENST00000624403 LRPPRCP42704 1394 aaKnown RBP14.13□□□□□ -0.15
ATRX-216ENST00000624403 CNGB1Q14028 1251 aaPredicted RBP14.13□□□□□ -0.15
ATRX-216ENST00000624403 KIF12Q96FN5 646 aa14.13□□□□□ -0.15
ATRX-216ENST00000624403 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
ATRX-216ENST00000624403 SLIT1O75093 1534 aa14.12□□□□□ -0.15
ATRX-216ENST00000624403 MYOM1P52179 1685 aa14.12□□□□□ -0.15
ATRX-216ENST00000624403 LTKP29376 864 aa14.12□□□□□ -0.15
ATRX-216ENST00000624403 CCDC184Q52MB2 194 aa14.12□□□□□ -0.15
ATRX-216ENST00000624403 METP08581 1390 aa14.11□□□□□ -0.15
ATRX-216ENST00000624403 PLEKHG1Q9ULL1 1385 aa14.11□□□□□ -0.15
ATRX-216ENST00000624403 TXNDC2Q86VQ3 553 aa14.11□□□□□ -0.15
ATRX-216ENST00000624403 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
ATRX-216ENST00000624403 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
ATRX-216ENST00000624403 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
ATRX-216ENST00000624403 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
ATRX-216ENST00000624403 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
ATRX-216ENST00000624403 BCANQ96GW7 911 aa14.1□□□□□ -0.15
ATRX-216ENST00000624403 EID1Q9Y6B2 187 aa14.1□□□□□ -0.15
ATRX-216ENST00000624403 EVC2Q86UK5 1308 aa14.1□□□□□ -0.15
ATRX-216ENST00000624403 KTN1Q86UP2 1357 aaKnown RBP14.09□□□□□ -0.15
ATRX-216ENST00000624403 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
ATRX-216ENST00000624403 ADAMTS13Q76LX8 1427 aa14.09□□□□□ -0.15
ATRX-216ENST00000624403 RALBP1Q15311 655 aa14.09□□□□□ -0.15
ATRX-216ENST00000624403 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
ATRX-216ENST00000624403 POGKQ9P215 609 aa14.09□□□□□ -0.15
ATRX-216ENST00000624403 CEP170BQ9Y4F5 1589 aaPredicted RBP14.09□□□□□ -0.15
ATRX-216ENST00000624403 MAP3K13O43283 966 aa14.08□□□□□ -0.16
ATRX-216ENST00000624403 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
ATRX-216ENST00000624403 PUS7Q96PZ0 661 aaKnown RBP14.08□□□□□ -0.16
ATRX-216ENST00000624403 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
ATRX-216ENST00000624403 MINK1Q8N4C8 1332 aaPredicted RBP14.07□□□□□ -0.16
ATRX-216ENST00000624403 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
ATRX-216ENST00000624403 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
ATRX-216ENST00000624403 PLEKHH1Q9ULM0 1364 aa14.06□□□□□ -0.16
ATRX-216ENST00000624403 MED14O60244 1454 aa14.06□□□□□ -0.16
ATRX-216ENST00000624403 CC2D1BQ5T0F9 858 aaKnown RBP14.05□□□□□ -0.16
ATRX-216ENST00000624403 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
ATRX-216ENST00000624403 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
ATRX-216ENST00000624403 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
ATRX-216ENST00000624403 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
ATRX-216ENST00000624403 TECPR2O15040 1411 aa14.05□□□□□ -0.16
ATRX-216ENST00000624403 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
ATRX-216ENST00000624403 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
ATRX-216ENST00000624403 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
ATRX-216ENST00000624403 ZNF142P52746 1687 aaPredicted RBP14.04□□□□□ -0.16
ATRX-216ENST00000624403 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
ATRX-216ENST00000624403 TMC1Q8TDI8 760 aa14.03□□□□□ -0.16
ATRX-216ENST00000624403 SLC26A8Q96RN1 970 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms