RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 GJD4Q96KN9 370 aaPredicted RBP22.19■■□□□ 1.14
RPL13A-214ENST00000624069 BCL9LQ86UU0 1499 aa22.19■■□□□ 1.14
RPL13A-214ENST00000624069 LAMC1P11047 1609 aa22.19■■□□□ 1.14
RPL13A-214ENST00000624069 MPHOSPH9Q99550 1183 aa22.18■■□□□ 1.14
RPL13A-214ENST00000624069 NALCNQ8IZF0 1738 aa22.15■■□□□ 1.14
RPL13A-214ENST00000624069 MYOM2P54296 1465 aa22.15■■□□□ 1.14
RPL13A-214ENST00000624069 ROBO2Q9HCK4 1378 aa22.14■■□□□ 1.14
RPL13A-214ENST00000624069 DEFB132Q7Z7B7 95 aa22.12■■□□□ 1.13
RPL13A-214ENST00000624069 CLTCL1P53675 1640 aa22.12■■□□□ 1.13
RPL13A-214ENST00000624069 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
RPL13A-214ENST00000624069 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
RPL13A-214ENST00000624069 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
RPL13A-214ENST00000624069 ESCO1Q5FWF5 840 aa22.08■■□□□ 1.13
RPL13A-214ENST00000624069 NEXMIFQ5QGS0 1516 aa22.07■■□□□ 1.12
RPL13A-214ENST00000624069 UNC5CLQ8IV45 518 aa22.07■■□□□ 1.12
RPL13A-214ENST00000624069 EP400Q96L91 3159 aa22.06■■□□□ 1.12
RPL13A-214ENST00000624069 FOXO3O43524 673 aa22.06■■□□□ 1.12
RPL13A-214ENST00000624069 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
RPL13A-214ENST00000624069 XPCQ01831 940 aaPredicted RBP22.05■■□□□ 1.12
RPL13A-214ENST00000624069 KIF1BO60333 1816 aa22.05■■□□□ 1.12
RPL13A-214ENST00000624069 PRAG1Q86YV5 1406 aa22.05■■□□□ 1.12
RPL13A-214ENST00000624069 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
RPL13A-214ENST00000624069 PXDNQ92626 1479 aa22.03■■□□□ 1.12
RPL13A-214ENST00000624069 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
RPL13A-214ENST00000624069 SF3B2Q13435 895 aaKnown RBP22.02■■□□□ 1.12
RPL13A-214ENST00000624069 SLIT2O94813 1529 aa22.01■■□□□ 1.11
RPL13A-214ENST00000624069 SEPT12Q8IYM1 358 aa22.01■■□□□ 1.11
RPL13A-214ENST00000624069 GLI3P10071 1580 aa21.99■■□□□ 1.11
RPL13A-214ENST00000624069 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
RPL13A-214ENST00000624069 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
RPL13A-214ENST00000624069 LRPPRCP42704 1394 aaKnown RBP21.97■■□□□ 1.11
RPL13A-214ENST00000624069 ANKRD30BQ9BXX2 1392 aa21.97■■□□□ 1.11
RPL13A-214ENST00000624069 SPATA31A3Q5VYP0 1347 aa21.96■■□□□ 1.11
RPL13A-214ENST00000624069 LRP5O75197 1615 aa21.95■■□□□ 1.1
RPL13A-214ENST00000624069 PSDA5PKW4 1024 aaPredicted RBP21.95■■□□□ 1.1
RPL13A-214ENST00000624069 VPS72Q15906 364 aa21.95■■□□□ 1.1
RPL13A-214ENST00000624069 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
RPL13A-214ENST00000624069 RPGRIP1LQ68CZ1 1315 aa21.94■■□□□ 1.1
RPL13A-214ENST00000624069 KRT27Q7Z3Y8 459 aa21.93■■□□□ 1.1
RPL13A-214ENST00000624069 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.93■■□□□ 1.1
RPL13A-214ENST00000624069 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
RPL13A-214ENST00000624069 CDC42BPGQ6DT37 1551 aa21.91■■□□□ 1.1
RPL13A-214ENST00000624069 SPATA31E1Q6ZUB1 1445 aa21.91■■□□□ 1.1
RPL13A-214ENST00000624069 DHX57Q6P158 1386 aaKnown RBP21.91■■□□□ 1.1
RPL13A-214ENST00000624069 WAPLQ7Z5K2 1190 aa21.9■■□□□ 1.1
RPL13A-214ENST00000624069 BAG6P46379 1132 aa21.89■■□□□ 1.09
RPL13A-214ENST00000624069 KRT28Q7Z3Y7 464 aa21.89■■□□□ 1.09
RPL13A-214ENST00000624069 BRWD3Q6RI45 1802 aa21.87■■□□□ 1.09
RPL13A-214ENST00000624069 PPLO60437 1756 aa21.87■■□□□ 1.09
RPL13A-214ENST00000624069 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
RPL13A-214ENST00000624069 CCDC9Q9Y3X0 531 aaKnown RBP21.86■■□□□ 1.09
RPL13A-214ENST00000624069 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
RPL13A-214ENST00000624069 STK26Q9P289 416 aa21.85■■□□□ 1.09
RPL13A-214ENST00000624069 HAP1P54257 671 aaPredicted RBP21.84■■□□□ 1.09
RPL13A-214ENST00000624069 IFT172Q9UG01 1749 aa21.83■■□□□ 1.09
RPL13A-214ENST00000624069 EN1Q05925 392 aaPredicted RBP21.83■■□□□ 1.09
RPL13A-214ENST00000624069 USP32Q8NFA0 1604 aa21.82■■□□□ 1.08
RPL13A-214ENST00000624069 TECPR2O15040 1411 aa21.81■■□□□ 1.08
RPL13A-214ENST00000624069 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
RPL13A-214ENST00000624069 PLEKHH1Q9ULM0 1364 aa21.81■■□□□ 1.08
RPL13A-214ENST00000624069 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
RPL13A-214ENST00000624069 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
RPL13A-214ENST00000624069 R3HDM1Q15032 1099 aaKnown RBP21.8■■□□□ 1.08
RPL13A-214ENST00000624069 PLEKHG5O94827 1062 aa21.79■■□□□ 1.08
RPL13A-214ENST00000624069 PSME1Q06323 249 aa21.79■■□□□ 1.08
RPL13A-214ENST00000624069 A0A0G2JS52 829 aa21.78■■□□□ 1.08
RPL13A-214ENST00000624069 MYT1Q01538 1121 aa21.78■■□□□ 1.08
RPL13A-214ENST00000624069 FAM98CQ17RN3 349 aaKnown RBP21.78■■□□□ 1.08
RPL13A-214ENST00000624069 TNS3Q68CZ2 1445 aa21.78■■□□□ 1.08
RPL13A-214ENST00000624069 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
RPL13A-214ENST00000624069 PHF8Q9UPP1 1060 aa21.77■■□□□ 1.08
RPL13A-214ENST00000624069 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
RPL13A-214ENST00000624069 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
RPL13A-214ENST00000624069 LMOD2Q6P5Q4 547 aa21.74■■□□□ 1.07
RPL13A-214ENST00000624069 SIRT1Q96EB6 747 aa21.72■■□□□ 1.07
RPL13A-214ENST00000624069 KIF1AQ12756 1690 aa21.72■■□□□ 1.07
RPL13A-214ENST00000624069 NWD2Q9ULI1 1742 aa21.72■■□□□ 1.07
RPL13A-214ENST00000624069 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
RPL13A-214ENST00000624069 EZH2Q15910 746 aaKnown RBP21.71■■□□□ 1.07
RPL13A-214ENST00000624069 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
RPL13A-214ENST00000624069 BTG4Q9NY30 223 aa21.71■■□□□ 1.07
RPL13A-214ENST00000624069 ARHGEF10O15013 1369 aa21.71■■□□□ 1.07
RPL13A-214ENST00000624069 DISP2A7MBM2 1401 aa21.71■■□□□ 1.07
RPL13A-214ENST00000624069 FMN2Q9NZ56 1722 aa21.7■■□□□ 1.06
RPL13A-214ENST00000624069 YY1P25490 414 aa21.7■■□□□ 1.06
RPL13A-214ENST00000624069 NRXN1Q9ULB1 1477 aa21.7■■□□□ 1.06
RPL13A-214ENST00000624069 PLCH1Q4KWH8 1693 aa21.69■■□□□ 1.06
RPL13A-214ENST00000624069 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
RPL13A-214ENST00000624069 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
RPL13A-214ENST00000624069 CAMKK2Q96RR4 588 aa21.68■■□□□ 1.06
RPL13A-214ENST00000624069 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
RPL13A-214ENST00000624069 SPATA31A5Q5VU36 1347 aa21.67■■□□□ 1.06
RPL13A-214ENST00000624069 SPATA31A7Q8IWB4 1347 aa21.67■■□□□ 1.06
RPL13A-214ENST00000624069 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
RPL13A-214ENST00000624069 KDM2AQ9Y2K7 1162 aa21.65■■□□□ 1.06
RPL13A-214ENST00000624069 PMFBP1Q8TBY8 1022 aa21.64■■□□□ 1.05
RPL13A-214ENST00000624069 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
RPL13A-214ENST00000624069 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
RPL13A-214ENST00000624069 TRIM37O94972 964 aa21.61■■□□□ 1.05
RPL13A-214ENST00000624069 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms