RNA–Protein interactions for RNA: ENST00000623652.1

PPM1F-210, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-210ENST00000623652 UQCRHLA0A096LP55 91 aa11.34□□□□□ -0.59
PPM1F-210ENST00000623652 UQCRHP07919 91 aa11.34□□□□□ -0.59
PPM1F-210ENST00000623652 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
PPM1F-210ENST00000623652 ZBTB7CA1YPR0 619 aa11.34□□□□□ -0.59
PPM1F-210ENST00000623652 WWC1Q8IX03 1113 aa11.34□□□□□ -0.59
PPM1F-210ENST00000623652 RARSP54136 660 aaKnown RBP11.33□□□□□ -0.6
PPM1F-210ENST00000623652 MAP7D2Q96T17 732 aa11.33□□□□□ -0.6
PPM1F-210ENST00000623652 CDK11BP21127 795 aaKnown RBP11.33□□□□□ -0.6
PPM1F-210ENST00000623652 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.6
PPM1F-210ENST00000623652 GOLGA6L22H0YM25 854 aa11.32□□□□□ -0.6
PPM1F-210ENST00000623652 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
PPM1F-210ENST00000623652 MAGI2Q86UL8 1455 aa11.32□□□□□ -0.6
PPM1F-210ENST00000623652 PPP1R9BQ96SB3 815 aa11.32□□□□□ -0.6
PPM1F-210ENST00000623652 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
PPM1F-210ENST00000623652 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
PPM1F-210ENST00000623652 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
PPM1F-210ENST00000623652 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
PPM1F-210ENST00000623652 TNNT2P45379 298 aaPredicted RBP11.3□□□□□ -0.6
PPM1F-210ENST00000623652 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
PPM1F-210ENST00000623652 SSFA2P28290 1259 aa11.3□□□□□ -0.6
PPM1F-210ENST00000623652 CNPY4Q8N129 248 aa11.3□□□□□ -0.6
PPM1F-210ENST00000623652 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
PPM1F-210ENST00000623652 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
PPM1F-210ENST00000623652 DDIT3P35638 169 aa11.29□□□□□ -0.6
PPM1F-210ENST00000623652 SMC5Q8IY18 1101 aa11.29□□□□□ -0.6
PPM1F-210ENST00000623652 GPATCH8Q9UKJ3 1502 aaKnown RBP11.29□□□□□ -0.6
PPM1F-210ENST00000623652 GPRASP1Q5JY77 1395 aa11.29□□□□□ -0.6
PPM1F-210ENST00000623652 KDM5DQ9BY66 1539 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 CAVIN1Q6NZI2 390 aaKnown RBP11.28□□□□□ -0.6
PPM1F-210ENST00000623652 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
PPM1F-210ENST00000623652 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 PTMSP20962 102 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 TERF1P54274 439 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 CHD1O14646 1710 aa11.28□□□□□ -0.6
PPM1F-210ENST00000623652 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
PPM1F-210ENST00000623652 MVPQ14764 893 aaKnown RBP11.28□□□□□ -0.6
PPM1F-210ENST00000623652 SMAP1Q8IYB5 467 aaPredicted RBP11.28□□□□□ -0.6
PPM1F-210ENST00000623652 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.6
PPM1F-210ENST00000623652 CEP170Q5SW79 1584 aa11.27□□□□□ -0.61
PPM1F-210ENST00000623652 ADGBQ8N7X0 1667 aa11.27□□□□□ -0.61
PPM1F-210ENST00000623652 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
PPM1F-210ENST00000623652 ITPRIPQ8IWB1 547 aa11.27□□□□□ -0.61
PPM1F-210ENST00000623652 WDR7Q9Y4E6 1490 aa11.27□□□□□ -0.61
PPM1F-210ENST00000623652 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
PPM1F-210ENST00000623652 ZMYM3Q14202 1370 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
PPM1F-210ENST00000623652 NOL7Q9UMY1 257 aaKnown RBP11.26□□□□□ -0.61
PPM1F-210ENST00000623652 PIK3C2GO75747 1445 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 SNX21Q969T3 373 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
PPM1F-210ENST00000623652 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
PPM1F-210ENST00000623652 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
PPM1F-210ENST00000623652 A2MP01023 1474 aa11.25□□□□□ -0.61
PPM1F-210ENST00000623652 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
PPM1F-210ENST00000623652 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
PPM1F-210ENST00000623652 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
PPM1F-210ENST00000623652 DNTTIP2Q5QJE6 756 aaKnown RBP11.25□□□□□ -0.61
PPM1F-210ENST00000623652 ZKSCAN2Q63HK3 967 aa11.25□□□□□ -0.61
PPM1F-210ENST00000623652 MTERF4Q7Z6M4 381 aaKnown RBP11.25□□□□□ -0.61
PPM1F-210ENST00000623652 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
PPM1F-210ENST00000623652 DYNC1I1O14576 645 aa11.24□□□□□ -0.61
PPM1F-210ENST00000623652 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
PPM1F-210ENST00000623652 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
PPM1F-210ENST00000623652 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
PPM1F-210ENST00000623652 K7ELQ4 463 aaPredicted RBP11.24□□□□□ -0.61
PPM1F-210ENST00000623652 RBSNQ9H1K0 784 aa11.24□□□□□ -0.61
PPM1F-210ENST00000623652 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
PPM1F-210ENST00000623652 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
PPM1F-210ENST00000623652 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
PPM1F-210ENST00000623652 PRDM15P57071 1507 aaPredicted RBP11.23□□□□□ -0.61
PPM1F-210ENST00000623652 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
PPM1F-210ENST00000623652 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
PPM1F-210ENST00000623652 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
PPM1F-210ENST00000623652 ASXL1Q8IXJ9 1541 aa11.23□□□□□ -0.61
PPM1F-210ENST00000623652 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
PPM1F-210ENST00000623652 CNKSR2Q8WXI2 1034 aa11.23□□□□□ -0.61
PPM1F-210ENST00000623652 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
PPM1F-210ENST00000623652 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
PPM1F-210ENST00000623652 PTMAP06454 111 aaKnown RBP11.22□□□□□ -0.61
PPM1F-210ENST00000623652 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
PPM1F-210ENST00000623652 ABCC2Q92887 1545 aa11.22□□□□□ -0.61
PPM1F-210ENST00000623652 HS1BP3Q53T59 392 aa11.22□□□□□ -0.61
PPM1F-210ENST00000623652 TSC1Q92574 1164 aa11.22□□□□□ -0.61
PPM1F-210ENST00000623652 GRIN2AQ12879 1464 aa11.22□□□□□ -0.61
PPM1F-210ENST00000623652 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
PPM1F-210ENST00000623652 RNF214Q8ND24 703 aa11.21□□□□□ -0.61
PPM1F-210ENST00000623652 IPO4Q8TEX9 1081 aaKnown RBP11.21□□□□□ -0.61
PPM1F-210ENST00000623652 CBX1P83916 185 aa11.21□□□□□ -0.62
PPM1F-210ENST00000623652 MPNDQ8N594 471 aa11.21□□□□□ -0.62
PPM1F-210ENST00000623652 RUNDC1Q96C34 613 aa11.21□□□□□ -0.62
PPM1F-210ENST00000623652 RBM27Q9P2N5 1060 aaKnown RBP11.21□□□□□ -0.62
PPM1F-210ENST00000623652 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.62
PPM1F-210ENST00000623652 VGLL3A8MV65 326 aa11.2□□□□□ -0.62
PPM1F-210ENST00000623652 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
PPM1F-210ENST00000623652 CCDC94Q9BW85 323 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms