RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 C14orf93Q9H972 538 aaKnown RBP19.06■□□□□ 0.64
ATRX-208ENST00000622960 DCAF11Q8TEB1 546 aa19.04■□□□□ 0.64
ATRX-208ENST00000622960 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
ATRX-208ENST00000622960 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
ATRX-208ENST00000622960 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
ATRX-208ENST00000622960 WAPLQ7Z5K2 1190 aa19.03■□□□□ 0.64
ATRX-208ENST00000622960 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
ATRX-208ENST00000622960 LRP6O75581 1613 aa19.03■□□□□ 0.64
ATRX-208ENST00000622960 ESCO1Q5FWF5 840 aa19.02■□□□□ 0.64
ATRX-208ENST00000622960 ORAI2Q96SN7 254 aa19.02■□□□□ 0.64
ATRX-208ENST00000622960 KDM2AQ9Y2K7 1162 aa19.02■□□□□ 0.64
ATRX-208ENST00000622960 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
ATRX-208ENST00000622960 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
ATRX-208ENST00000622960 SIRT1Q96EB6 747 aa19.01■□□□□ 0.63
ATRX-208ENST00000622960 POGKQ9P215 609 aa19.01■□□□□ 0.63
ATRX-208ENST00000622960 RGS17Q9UGC6 210 aaPredicted RBP19.01■□□□□ 0.63
ATRX-208ENST00000622960 DDX17Q92841 729 aaKnown RBP19■□□□□ 0.63
ATRX-208ENST00000622960 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
ATRX-208ENST00000622960 DLC1Q96QB1 1528 aa19■□□□□ 0.63
ATRX-208ENST00000622960 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
ATRX-208ENST00000622960 PLEKHH1Q9ULM0 1364 aa18.99■□□□□ 0.63
ATRX-208ENST00000622960 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
ATRX-208ENST00000622960 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
ATRX-208ENST00000622960 PRAM1Q96QH2 718 aa18.97■□□□□ 0.63
ATRX-208ENST00000622960 SOS2Q07890 1332 aaPredicted RBP18.97■□□□□ 0.63
ATRX-208ENST00000622960 POTEAQ6S8J7 498 aa18.96■□□□□ 0.63
ATRX-208ENST00000622960 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
ATRX-208ENST00000622960 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
ATRX-208ENST00000622960 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
ATRX-208ENST00000622960 C8orf37Q96NL8 207 aa18.93■□□□□ 0.62
ATRX-208ENST00000622960 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
ATRX-208ENST00000622960 FOXO3O43524 673 aa18.92■□□□□ 0.62
ATRX-208ENST00000622960 ADGRB2O60241 1585 aa18.92■□□□□ 0.62
ATRX-208ENST00000622960 COL22A1Q8NFW1 1626 aaPredicted RBP18.91■□□□□ 0.62
ATRX-208ENST00000622960 AFF2P51816 1311 aa18.91■□□□□ 0.62
ATRX-208ENST00000622960 PXDNQ92626 1479 aa18.9■□□□□ 0.62
ATRX-208ENST00000622960 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
ATRX-208ENST00000622960 ADAMTS2O95450 1211 aa18.89■□□□□ 0.61
ATRX-208ENST00000622960 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
ATRX-208ENST00000622960 KIAA1210Q9ULL0 1709 aa18.88■□□□□ 0.61
ATRX-208ENST00000622960 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
ATRX-208ENST00000622960 PSME1Q06323 249 aa18.88■□□□□ 0.61
ATRX-208ENST00000622960 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
ATRX-208ENST00000622960 RXRBP28702 533 aa18.87■□□□□ 0.61
ATRX-208ENST00000622960 ARHGEF28Q8N1W1 1705 aaKnown RBP18.86■□□□□ 0.61
ATRX-208ENST00000622960 MINK1Q8N4C8 1332 aaPredicted RBP18.86■□□□□ 0.61
ATRX-208ENST00000622960 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
ATRX-208ENST00000622960 HIRIP3Q9BW71 556 aaPredicted RBP18.85■□□□□ 0.61
ATRX-208ENST00000622960 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
ATRX-208ENST00000622960 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
ATRX-208ENST00000622960 KRT28Q7Z3Y7 464 aa18.84■□□□□ 0.61
ATRX-208ENST00000622960 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.6
ATRX-208ENST00000622960 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
ATRX-208ENST00000622960 CDK12Q9NYV4 1490 aaPredicted RBP18.82■□□□□ 0.6
ATRX-208ENST00000622960 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
ATRX-208ENST00000622960 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
ATRX-208ENST00000622960 WASLO00401 505 aaPredicted RBP18.81■□□□□ 0.6
ATRX-208ENST00000622960 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
ATRX-208ENST00000622960 USP21Q9UK80 565 aa18.81■□□□□ 0.6
ATRX-208ENST00000622960 USP32Q8NFA0 1604 aa18.81■□□□□ 0.6
ATRX-208ENST00000622960 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
ATRX-208ENST00000622960 MARF1Q9Y4F3 1742 aaKnown RBP18.8■□□□□ 0.6
ATRX-208ENST00000622960 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
ATRX-208ENST00000622960 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
ATRX-208ENST00000622960 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
ATRX-208ENST00000622960 SBNO1A3KN83 1393 aa18.79■□□□□ 0.6
ATRX-208ENST00000622960 TRPC5Q9UL62 973 aaPredicted RBP18.78■□□□□ 0.6
ATRX-208ENST00000622960 NEUROD1Q13562 356 aa18.77■□□□□ 0.6
ATRX-208ENST00000622960 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
ATRX-208ENST00000622960 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
ATRX-208ENST00000622960 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
ATRX-208ENST00000622960 ATP7BP35670 1465 aa18.73■□□□□ 0.59
ATRX-208ENST00000622960 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
ATRX-208ENST00000622960 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
ATRX-208ENST00000622960 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
ATRX-208ENST00000622960 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
ATRX-208ENST00000622960 SIN3AQ96ST3 1273 aa18.72■□□□□ 0.59
ATRX-208ENST00000622960 PRR36Q9H6K5 1346 aa18.72■□□□□ 0.59
ATRX-208ENST00000622960 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
ATRX-208ENST00000622960 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
ATRX-208ENST00000622960 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
ATRX-208ENST00000622960 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
ATRX-208ENST00000622960 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
ATRX-208ENST00000622960 RGS12O14924 1447 aa18.71■□□□□ 0.59
ATRX-208ENST00000622960 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
ATRX-208ENST00000622960 TRPM1Q7Z4N2 1603 aa18.71■□□□□ 0.58
ATRX-208ENST00000622960 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
ATRX-208ENST00000622960 ATRNO75882 1429 aa18.7■□□□□ 0.58
ATRX-208ENST00000622960 SRPK2P78362 688 aaKnown RBP18.7■□□□□ 0.58
ATRX-208ENST00000622960 TRPM3Q9HCF6 1732 aaPredicted RBP18.7■□□□□ 0.58
ATRX-208ENST00000622960 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
ATRX-208ENST00000622960 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
ATRX-208ENST00000622960 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
ATRX-208ENST00000622960 BCL9LQ86UU0 1499 aa18.67■□□□□ 0.58
ATRX-208ENST00000622960 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
ATRX-208ENST00000622960 CABLES1Q8TDN4 633 aa18.67■□□□□ 0.58
ATRX-208ENST00000622960 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
ATRX-208ENST00000622960 PLCH1Q4KWH8 1693 aa18.66■□□□□ 0.58
ATRX-208ENST00000622960 SLIT2O94813 1529 aa18.66■□□□□ 0.58
ATRX-208ENST00000622960 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms