RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CREBRFQ8IUR6 639 aa19.76■□□□□ 0.75
GABRB3-215ENST00000622697 HSP90AA2PQ14568 343 aaPredicted RBP19.76■□□□□ 0.75
GABRB3-215ENST00000622697 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
GABRB3-215ENST00000622697 CDC45O75419 566 aa19.75■□□□□ 0.75
GABRB3-215ENST00000622697 CABP1Q9NZU7 370 aa19.75■□□□□ 0.75
GABRB3-215ENST00000622697 ROCK1Q13464 1354 aa19.75■□□□□ 0.75
GABRB3-215ENST00000622697 PSME1Q06323 249 aa19.74■□□□□ 0.75
GABRB3-215ENST00000622697 PTPN23Q9H3S7 1636 aa19.74■□□□□ 0.75
GABRB3-215ENST00000622697 TPM4P67936 248 aa19.74■□□□□ 0.75
GABRB3-215ENST00000622697 AAMPQ13685 434 aa19.74■□□□□ 0.75
GABRB3-215ENST00000622697 ABCC5O15440 1437 aa19.74■□□□□ 0.75
GABRB3-215ENST00000622697 NEXNQ0ZGT2 675 aa19.73■□□□□ 0.75
GABRB3-215ENST00000622697 TWISTNBQ3B726 338 aaPredicted RBP19.73■□□□□ 0.75
GABRB3-215ENST00000622697 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
GABRB3-215ENST00000622697 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
GABRB3-215ENST00000622697 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
GABRB3-215ENST00000622697 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
GABRB3-215ENST00000622697 ATP6V1DQ9Y5K8 247 aa19.72■□□□□ 0.75
GABRB3-215ENST00000622697 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
GABRB3-215ENST00000622697 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
GABRB3-215ENST00000622697 ZKSCAN1P17029 563 aaPredicted RBP19.72■□□□□ 0.75
GABRB3-215ENST00000622697 VPS37CA5D8V6 355 aaPredicted RBP19.72■□□□□ 0.75
GABRB3-215ENST00000622697 TRAK2O60296 914 aa19.71■□□□□ 0.75
GABRB3-215ENST00000622697 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
GABRB3-215ENST00000622697 TTC5Q8N0Z6 440 aa19.71■□□□□ 0.75
GABRB3-215ENST00000622697 CDK19Q9BWU1 502 aa19.71■□□□□ 0.75
GABRB3-215ENST00000622697 NLRP6P59044 892 aa19.71■□□□□ 0.75
GABRB3-215ENST00000622697 FOSBP53539 338 aa19.7■□□□□ 0.74
GABRB3-215ENST00000622697 SLFN5Q08AF3 891 aa19.7■□□□□ 0.74
GABRB3-215ENST00000622697 NUCB2P80303 420 aa19.69■□□□□ 0.74
GABRB3-215ENST00000622697 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
GABRB3-215ENST00000622697 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
GABRB3-215ENST00000622697 G3BP1Q13283 466 aaKnown RBP eCLIP19.68■□□□□ 0.74
GABRB3-215ENST00000622697 KIF3AQ9Y496 699 aa19.68■□□□□ 0.74
GABRB3-215ENST00000622697 PLB1Q6P1J6 1458 aa19.68■□□□□ 0.74
GABRB3-215ENST00000622697 UBTFL1P0CB47 393 aaPredicted RBP19.68■□□□□ 0.74
GABRB3-215ENST00000622697 CAMSAP2Q08AD1 1489 aa19.67■□□□□ 0.74
GABRB3-215ENST00000622697 RASSF8Q8NHQ8 419 aa19.67■□□□□ 0.74
GABRB3-215ENST00000622697 RAPGEF3O95398 923 aa19.67■□□□□ 0.74
GABRB3-215ENST00000622697 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
GABRB3-215ENST00000622697 RNF214Q8ND24 703 aa19.67■□□□□ 0.74
GABRB3-215ENST00000622697 SMC3Q9UQE7 1217 aa19.67■□□□□ 0.74
GABRB3-215ENST00000622697 ATF7IPQ6VMQ6 1270 aa19.66■□□□□ 0.74
GABRB3-215ENST00000622697 GOLGA6L19H0YKK7 550 aa19.66■□□□□ 0.74
GABRB3-215ENST00000622697 CLSTN1O94985 981 aa19.66■□□□□ 0.74
GABRB3-215ENST00000622697 SULT6B1Q6IMI4 303 aa19.66■□□□□ 0.74
GABRB3-215ENST00000622697 BECN2A8MW95 431 aa19.66■□□□□ 0.74
GABRB3-215ENST00000622697 WDR63Q8IWG1 891 aa19.66■□□□□ 0.74
GABRB3-215ENST00000622697 NCOA1Q15788 1441 aa19.65■□□□□ 0.74
GABRB3-215ENST00000622697 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
GABRB3-215ENST00000622697 IQGAP2Q13576 1575 aa19.65■□□□□ 0.74
GABRB3-215ENST00000622697 GTF2E1P29083 439 aaPredicted RBP19.64■□□□□ 0.74
GABRB3-215ENST00000622697 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
GABRB3-215ENST00000622697 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
GABRB3-215ENST00000622697 NEK4P51957 841 aa19.64■□□□□ 0.73
GABRB3-215ENST00000622697 SURF6O75683 361 aaKnown RBP19.64■□□□□ 0.73
GABRB3-215ENST00000622697 CAVIN1Q6NZI2 390 aaKnown RBP19.64■□□□□ 0.73
GABRB3-215ENST00000622697 BICD2Q8TD16 824 aa19.64■□□□□ 0.73
GABRB3-215ENST00000622697 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
GABRB3-215ENST00000622697 DDX58O95786 925 aaKnown RBP19.63■□□□□ 0.73
GABRB3-215ENST00000622697 NSD3Q9BZ95 1437 aa19.63■□□□□ 0.73
GABRB3-215ENST00000622697 ZNF592Q92610 1267 aa19.63■□□□□ 0.73
GABRB3-215ENST00000622697 MAP3K1Q13233 1512 aa19.62■□□□□ 0.73
GABRB3-215ENST00000622697 EVA1CP58658 441 aa19.62■□□□□ 0.73
GABRB3-215ENST00000622697 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
GABRB3-215ENST00000622697 FAM13BQ9NYF5 915 aa19.62■□□□□ 0.73
GABRB3-215ENST00000622697 NASPP49321 788 aaPredicted RBP19.62■□□□□ 0.73
GABRB3-215ENST00000622697 MRE11P49959 708 aa19.62■□□□□ 0.73
GABRB3-215ENST00000622697 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 CCDC27Q2M243 656 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 APPP05067 770 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 PTPRKQ15262 1439 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
GABRB3-215ENST00000622697 PRPF40AO75400 957 aaKnown RBP19.6■□□□□ 0.73
GABRB3-215ENST00000622697 ABTB2Q8N961 1025 aa19.6■□□□□ 0.73
GABRB3-215ENST00000622697 PLEKHH2Q8IVE3 1493 aa19.6■□□□□ 0.73
GABRB3-215ENST00000622697 NEUROD6Q96NK8 337 aa19.59■□□□□ 0.73
GABRB3-215ENST00000622697 RNF20Q5VTR2 975 aa19.59■□□□□ 0.73
GABRB3-215ENST00000622697 TMEM57Q8N5G2 664 aa19.59■□□□□ 0.73
GABRB3-215ENST00000622697 CCDC34Q96HJ3 373 aa19.59■□□□□ 0.73
GABRB3-215ENST00000622697 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
GABRB3-215ENST00000622697 ERC2O15083 957 aa19.59■□□□□ 0.73
GABRB3-215ENST00000622697 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
GABRB3-215ENST00000622697 BCL11BQ9C0K0 894 aaPredicted RBP19.59■□□□□ 0.73
GABRB3-215ENST00000622697 CHD1LQ86WJ1 897 aa19.58■□□□□ 0.73
GABRB3-215ENST00000622697 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.73
GABRB3-215ENST00000622697 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.73
GABRB3-215ENST00000622697 SYTL4Q96C24 671 aaPredicted RBP19.58■□□□□ 0.72
GABRB3-215ENST00000622697 PES1O00541 588 aaKnown RBP19.58■□□□□ 0.72
GABRB3-215ENST00000622697 TMPOP42166 694 aaKnown RBP19.58■□□□□ 0.72
GABRB3-215ENST00000622697 HSP90AB4PQ58FF6 505 aa19.57■□□□□ 0.72
GABRB3-215ENST00000622697 RPRD2Q5VT52 1461 aaKnown RBP19.57■□□□□ 0.72
GABRB3-215ENST00000622697 MAP4K4O95819 1239 aaPredicted RBP19.57■□□□□ 0.72
GABRB3-215ENST00000622697 GNAI3P08754 354 aa19.56■□□□□ 0.72
GABRB3-215ENST00000622697 RAPGEF4Q8WZA2 1011 aa19.56■□□□□ 0.72
GABRB3-215ENST00000622697 CCDC141Q6ZP82 1450 aa19.56■□□□□ 0.72
GABRB3-215ENST00000622697 CPLX1O14810 134 aa19.56■□□□□ 0.72
GABRB3-215ENST00000622697 GNAI2P04899 355 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms