RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 YTHDC2Q9H6S0 1430 aaKnown RBP15□□□□□ -0.01
PCDHGC3-207ENST00000622656 RGPD8O14715 1765 aaPredicted RBP14.99□□□□□ -0.01
PCDHGC3-207ENST00000622656 HRCP23327 699 aa14.99□□□□□ -0.01
PCDHGC3-207ENST00000622656 C14orf93Q9H972 538 aaKnown RBP14.99□□□□□ -0.01
PCDHGC3-207ENST00000622656 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
PCDHGC3-207ENST00000622656 FMN2Q9NZ56 1722 aa14.97□□□□□ -0.01
PCDHGC3-207ENST00000622656 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
PCDHGC3-207ENST00000622656 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.01
PCDHGC3-207ENST00000622656 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.01
PCDHGC3-207ENST00000622656 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.01
PCDHGC3-207ENST00000622656 ADGRB1O14514 1584 aa14.96□□□□□ -0.01
PCDHGC3-207ENST00000622656 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.01
PCDHGC3-207ENST00000622656 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
PCDHGC3-207ENST00000622656 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.02
PCDHGC3-207ENST00000622656 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.02
PCDHGC3-207ENST00000622656 DCAF11Q8TEB1 546 aa14.94□□□□□ -0.02
PCDHGC3-207ENST00000622656 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
PCDHGC3-207ENST00000622656 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
PCDHGC3-207ENST00000622656 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDHGC3-207ENST00000622656 ESCO1Q5FWF5 840 aa14.92□□□□□ -0.02
PCDHGC3-207ENST00000622656 PXDNQ92626 1479 aa14.91□□□□□ -0.02
PCDHGC3-207ENST00000622656 XPCQ01831 940 aaPredicted RBP14.91□□□□□ -0.02
PCDHGC3-207ENST00000622656 MEX3CQ5U5Q3 659 aaKnown RBP14.91□□□□□ -0.02
PCDHGC3-207ENST00000622656 PRAM1Q96QH2 718 aa14.9□□□□□ -0.02
PCDHGC3-207ENST00000622656 USP32Q8NFA0 1604 aa14.9□□□□□ -0.02
PCDHGC3-207ENST00000622656 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
PCDHGC3-207ENST00000622656 FOXO3O43524 673 aa14.89□□□□□ -0.03
PCDHGC3-207ENST00000622656 SIRT1Q96EB6 747 aa14.89□□□□□ -0.03
PCDHGC3-207ENST00000622656 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
PCDHGC3-207ENST00000622656 COL22A1Q8NFW1 1626 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-207ENST00000622656 ARHGEF28Q8N1W1 1705 aaKnown RBP14.88□□□□□ -0.03
PCDHGC3-207ENST00000622656 AFF2P51816 1311 aa14.87□□□□□ -0.03
PCDHGC3-207ENST00000622656 KIF1AQ12756 1690 aa14.86□□□□□ -0.03
PCDHGC3-207ENST00000622656 ADGRB2O60241 1585 aa14.85□□□□□ -0.03
PCDHGC3-207ENST00000622656 ADAMTS2O95450 1211 aa14.85□□□□□ -0.03
PCDHGC3-207ENST00000622656 C8orf37Q96NL8 207 aa14.85□□□□□ -0.03
PCDHGC3-207ENST00000622656 HIRIP3Q9BW71 556 aaPredicted RBP14.85□□□□□ -0.03
PCDHGC3-207ENST00000622656 MARF1Q9Y4F3 1742 aaKnown RBP14.85□□□□□ -0.03
PCDHGC3-207ENST00000622656 NPHP3Q7Z494 1330 aa14.85□□□□□ -0.03
PCDHGC3-207ENST00000622656 POGKQ9P215 609 aa14.84□□□□□ -0.03
PCDHGC3-207ENST00000622656 MINK1Q8N4C8 1332 aaPredicted RBP14.84□□□□□ -0.03
PCDHGC3-207ENST00000622656 ZNF772Q68DY9 489 aaPredicted RBP14.83□□□□□ -0.04
PCDHGC3-207ENST00000622656 SIN3AQ96ST3 1273 aa14.82□□□□□ -0.04
PCDHGC3-207ENST00000622656 KIAA1210Q9ULL0 1709 aa14.82□□□□□ -0.04
PCDHGC3-207ENST00000622656 PRR36Q9H6K5 1346 aa14.82□□□□□ -0.04
PCDHGC3-207ENST00000622656 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
PCDHGC3-207ENST00000622656 PHF8Q9UPP1 1060 aa14.81□□□□□ -0.04
PCDHGC3-207ENST00000622656 KRT28Q7Z3Y7 464 aa14.8□□□□□ -0.04
PCDHGC3-207ENST00000622656 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
PCDHGC3-207ENST00000622656 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
PCDHGC3-207ENST00000622656 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
PCDHGC3-207ENST00000622656 NGLY1Q96IV0 654 aa14.79□□□□□ -0.04
PCDHGC3-207ENST00000622656 ABCA3Q99758 1704 aa14.79□□□□□ -0.04
PCDHGC3-207ENST00000622656 TRPM3Q9HCF6 1732 aaPredicted RBP14.79□□□□□ -0.04
PCDHGC3-207ENST00000622656 TULP4Q9NRJ4 1543 aa14.77□□□□□ -0.04
PCDHGC3-207ENST00000622656 ANKARQ7Z5J8 1434 aa14.77□□□□□ -0.04
PCDHGC3-207ENST00000622656 RXRBP28702 533 aa14.77□□□□□ -0.05
PCDHGC3-207ENST00000622656 QTRT2Q9H974 415 aaKnown RBP14.77□□□□□ -0.05
PCDHGC3-207ENST00000622656 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
PCDHGC3-207ENST00000622656 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
PCDHGC3-207ENST00000622656 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
PCDHGC3-207ENST00000622656 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
PCDHGC3-207ENST00000622656 RGS12O14924 1447 aa14.75□□□□□ -0.05
PCDHGC3-207ENST00000622656 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
PCDHGC3-207ENST00000622656 ALS2Q96Q42 1657 aa14.75□□□□□ -0.05
PCDHGC3-207ENST00000622656 TRPM1Q7Z4N2 1603 aa14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 NEUROD1Q13562 356 aa14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 FNBP4Q8N3X1 1017 aaPredicted RBP14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 USP21Q9UK80 565 aa14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 ATP7BP35670 1465 aa14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 BCL9LQ86UU0 1499 aa14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 TOPAZ1Q8N9V7 1692 aa14.74□□□□□ -0.05
PCDHGC3-207ENST00000622656 ITSN1Q15811 1721 aa14.73□□□□□ -0.05
PCDHGC3-207ENST00000622656 CDK12Q9NYV4 1490 aaPredicted RBP14.73□□□□□ -0.05
PCDHGC3-207ENST00000622656 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
PCDHGC3-207ENST00000622656 RBM6P78332 1123 aaKnown RBP14.72□□□□□ -0.05
PCDHGC3-207ENST00000622656 PSME1Q06323 249 aa14.72□□□□□ -0.05
PCDHGC3-207ENST00000622656 ATRNO75882 1429 aa14.72□□□□□ -0.05
PCDHGC3-207ENST00000622656 CRYBG1Q9Y4K1 1723 aa14.72□□□□□ -0.05
PCDHGC3-207ENST00000622656 SBNO1A3KN83 1393 aa14.72□□□□□ -0.05
PCDHGC3-207ENST00000622656 PLCH1Q4KWH8 1693 aa14.71□□□□□ -0.05
PCDHGC3-207ENST00000622656 LMOD2Q6P5Q4 547 aa14.71□□□□□ -0.05
PCDHGC3-207ENST00000622656 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.71□□□□□ -0.05
PCDHGC3-207ENST00000622656 UPF1Q92900 1129 aaKnown RBP eCLIP14.7□□□□□ -0.06
PCDHGC3-207ENST00000622656 NUDT16Q96DE0 195 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-207ENST00000622656 CDK19Q9BWU1 502 aa14.7□□□□□ -0.06
PCDHGC3-207ENST00000622656 SLIT2O94813 1529 aa14.7□□□□□ -0.06
PCDHGC3-207ENST00000622656 GLI3P10071 1580 aa14.68□□□□□ -0.06
PCDHGC3-207ENST00000622656 NBPF8Q3BBV2 869 aa14.68□□□□□ -0.06
PCDHGC3-207ENST00000622656 TRPC5Q9UL62 973 aaPredicted RBP14.68□□□□□ -0.06
PCDHGC3-207ENST00000622656 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
PCDHGC3-207ENST00000622656 BRWD3Q6RI45 1802 aa14.66□□□□□ -0.06
PCDHGC3-207ENST00000622656 ARHGEF10O15013 1369 aa14.66□□□□□ -0.06
PCDHGC3-207ENST00000622656 GPRASP1Q5JY77 1395 aa14.66□□□□□ -0.06
PCDHGC3-207ENST00000622656 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
PCDHGC3-207ENST00000622656 NWD2Q9ULI1 1742 aa14.66□□□□□ -0.06
PCDHGC3-207ENST00000622656 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
PCDHGC3-207ENST00000622656 EP400Q96L91 3159 aa14.65□□□□□ -0.06
PCDHGC3-207ENST00000622656 FAM83GA6ND36 823 aa14.65□□□□□ -0.06
PCDHGC3-207ENST00000622656 NRAPQ86VF7 1730 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms