RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 FRMPD1Q5SYB0 1578 aa16.5■□□□□ 0.23
SCAMP1-207ENST00000621999 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
SCAMP1-207ENST00000621999 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
SCAMP1-207ENST00000621999 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
SCAMP1-207ENST00000621999 PPRC1Q5VV67 1664 aaKnown RBP16.49■□□□□ 0.23
SCAMP1-207ENST00000621999 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
SCAMP1-207ENST00000621999 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
SCAMP1-207ENST00000621999 KIF1BO60333 1816 aa16.48■□□□□ 0.23
SCAMP1-207ENST00000621999 PHF8Q9UPP1 1060 aa16.47■□□□□ 0.23
SCAMP1-207ENST00000621999 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
SCAMP1-207ENST00000621999 MTHFSP49914 203 aa16.46■□□□□ 0.23
SCAMP1-207ENST00000621999 METP08581 1390 aa16.46■□□□□ 0.23
SCAMP1-207ENST00000621999 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
SCAMP1-207ENST00000621999 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
SCAMP1-207ENST00000621999 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.22
SCAMP1-207ENST00000621999 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
SCAMP1-207ENST00000621999 A2ML1A8K2U0 1454 aa16.45■□□□□ 0.22
SCAMP1-207ENST00000621999 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
SCAMP1-207ENST00000621999 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
SCAMP1-207ENST00000621999 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
SCAMP1-207ENST00000621999 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
SCAMP1-207ENST00000621999 NME9Q86XW9 330 aa16.42■□□□□ 0.22
SCAMP1-207ENST00000621999 ACEP12821 1306 aa16.42■□□□□ 0.22
SCAMP1-207ENST00000621999 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
SCAMP1-207ENST00000621999 C19orf44Q9H6X5 657 aa16.42■□□□□ 0.22
SCAMP1-207ENST00000621999 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
SCAMP1-207ENST00000621999 DIAPH1O60610 1272 aaKnown RBP16.41■□□□□ 0.22
SCAMP1-207ENST00000621999 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
SCAMP1-207ENST00000621999 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
SCAMP1-207ENST00000621999 MSH6P52701 1360 aa16.4■□□□□ 0.22
SCAMP1-207ENST00000621999 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
SCAMP1-207ENST00000621999 EVA1CP58658 441 aa16.39■□□□□ 0.21
SCAMP1-207ENST00000621999 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
SCAMP1-207ENST00000621999 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
SCAMP1-207ENST00000621999 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
SCAMP1-207ENST00000621999 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
SCAMP1-207ENST00000621999 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
SCAMP1-207ENST00000621999 PTPRMP28827 1452 aa16.38■□□□□ 0.21
SCAMP1-207ENST00000621999 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
SCAMP1-207ENST00000621999 HMOX1P09601 288 aa16.37■□□□□ 0.21
SCAMP1-207ENST00000621999 MYOM2P54296 1465 aa16.37■□□□□ 0.21
SCAMP1-207ENST00000621999 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
SCAMP1-207ENST00000621999 KDM4FA0A1W2PPD8 638 aa16.37■□□□□ 0.21
SCAMP1-207ENST00000621999 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
SCAMP1-207ENST00000621999 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 RIMS1Q86UR5 1692 aaKnown RBP16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 FBLN1P23142 703 aa16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 FKBP8Q14318 412 aa16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
SCAMP1-207ENST00000621999 PPIP5K1Q6PFW1 1433 aa16.35■□□□□ 0.21
SCAMP1-207ENST00000621999 ORAI2Q96SN7 254 aa16.34■□□□□ 0.21
SCAMP1-207ENST00000621999 APAF1O14727 1248 aa16.34■□□□□ 0.21
SCAMP1-207ENST00000621999 UBAP1LF5GYI3 381 aa16.33■□□□□ 0.21
SCAMP1-207ENST00000621999 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.21
SCAMP1-207ENST00000621999 NLRP2Q9NX02 1062 aa16.33■□□□□ 0.2
SCAMP1-207ENST00000621999 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.2
SCAMP1-207ENST00000621999 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
SCAMP1-207ENST00000621999 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
SCAMP1-207ENST00000621999 DEPDC5O75140 1603 aa16.32■□□□□ 0.2
SCAMP1-207ENST00000621999 ROBO2Q9HCK4 1378 aa16.32■□□□□ 0.2
SCAMP1-207ENST00000621999 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
SCAMP1-207ENST00000621999 CARD14Q9BXL6 1004 aa16.32■□□□□ 0.2
SCAMP1-207ENST00000621999 ZC3H13Q5T200 1668 aaKnown RBP16.32■□□□□ 0.2
SCAMP1-207ENST00000621999 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
SCAMP1-207ENST00000621999 ZNF335Q9H4Z2 1342 aaPredicted RBP16.31■□□□□ 0.2
SCAMP1-207ENST00000621999 MADDQ8WXG6 1647 aa16.31■□□□□ 0.2
SCAMP1-207ENST00000621999 FYB1O15117 783 aa16.31■□□□□ 0.2
SCAMP1-207ENST00000621999 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
SCAMP1-207ENST00000621999 ZFYVE9O95405 1425 aa16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 PREX1Q8TCU6 1659 aa16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 PIK3C2BO00750 1634 aa16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 PRDM11Q9NQV5 511 aa16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 SYNMO15061 1565 aa16.3■□□□□ 0.2
SCAMP1-207ENST00000621999 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 ARXQ96QS3 562 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 TOM1O60784 492 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 TMEM94Q12767 1356 aa16.29■□□□□ 0.2
SCAMP1-207ENST00000621999 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 NPM2Q86SE8 214 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
SCAMP1-207ENST00000621999 NINLQ9Y2I6 1382 aa16.27■□□□□ 0.2
SCAMP1-207ENST00000621999 REREQ9P2R6 1566 aa16.27■□□□□ 0.19
SCAMP1-207ENST00000621999 A0A1W2PP64 1363 aa16.27■□□□□ 0.19
SCAMP1-207ENST00000621999 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
SCAMP1-207ENST00000621999 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
SCAMP1-207ENST00000621999 SPATA31D1Q6ZQQ2 1576 aa16.25■□□□□ 0.19
SCAMP1-207ENST00000621999 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms