RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 DLC1Q96QB1 1528 aa34.99■■■■□ 3.19
THSD4-207ENST00000620694 KIAA1210Q9ULL0 1709 aa34.95■■■■□ 3.19
THSD4-207ENST00000620694 NBPF1Q3BBV0 1214 aa34.95■■■■□ 3.19
THSD4-207ENST00000620694 SAFB2Q14151 953 aaKnown RBP eCLIP34.94■■■■□ 3.18
THSD4-207ENST00000620694 BRINP3Q76B58 766 aa34.92■■■■□ 3.18
THSD4-207ENST00000620694 CDC42BPGQ6DT37 1551 aa34.91■■■■□ 3.18
THSD4-207ENST00000620694 C1orf167Q5SNV9 1468 aa34.9■■■■□ 3.18
THSD4-207ENST00000620694 CLSPNQ9HAW4 1339 aa34.89■■■■□ 3.18
THSD4-207ENST00000620694 NBPF8Q3BBV2 869 aa34.84■■■■□ 3.17
THSD4-207ENST00000620694 CCER1Q8TC90 406 aaPredicted RBP34.83■■■■□ 3.17
THSD4-207ENST00000620694 NUTM2FA1L443 756 aa34.82■■■■□ 3.16
THSD4-207ENST00000620694 ORAI2Q96SN7 254 aa34.81■■■■□ 3.16
THSD4-207ENST00000620694 ROCK2O75116 1388 aaKnown RBP34.81■■■■□ 3.16
THSD4-207ENST00000620694 MINK1Q8N4C8 1332 aaPredicted RBP34.81■■■■□ 3.16
THSD4-207ENST00000620694 HIRIP3Q9BW71 556 aaPredicted RBP34.79■■■■□ 3.16
THSD4-207ENST00000620694 TRPM1Q7Z4N2 1603 aa34.79■■■■□ 3.16
THSD4-207ENST00000620694 ESCO1Q5FWF5 840 aa34.78■■■■□ 3.16
THSD4-207ENST00000620694 PHLPP1O60346 1717 aa34.78■■■■□ 3.16
THSD4-207ENST00000620694 ARHGEF28Q8N1W1 1705 aaKnown RBP34.78■■■■□ 3.16
THSD4-207ENST00000620694 AHDC1Q5TGY3 1603 aaPredicted RBP34.77■■■■□ 3.16
THSD4-207ENST00000620694 ADGRB2O60241 1585 aa34.74■■■■□ 3.15
THSD4-207ENST00000620694 FMN2Q9NZ56 1722 aa34.73■■■■□ 3.15
THSD4-207ENST00000620694 COL16A1Q07092 1604 aaPredicted RBP34.71■■■■□ 3.15
THSD4-207ENST00000620694 DDX17Q92841 729 aaKnown RBP34.71■■■■□ 3.15
THSD4-207ENST00000620694 WASLO00401 505 aaPredicted RBP34.7■■■■□ 3.15
THSD4-207ENST00000620694 TIMELESSQ9UNS1 1208 aa34.7■■■■□ 3.15
THSD4-207ENST00000620694 CENPJQ9HC77 1338 aaPredicted RBP34.7■■■■□ 3.15
THSD4-207ENST00000620694 GPRASP1Q5JY77 1395 aa34.69■■■■□ 3.14
THSD4-207ENST00000620694 EIF3AQ14152 1382 aaKnown RBP34.68■■■■□ 3.14
THSD4-207ENST00000620694 JCADQ9P266 1359 aa34.68■■■■□ 3.14
THSD4-207ENST00000620694 NHSL1Q5SYE7 1610 aa34.67■■■■□ 3.14
THSD4-207ENST00000620694 RALGAPBQ86X10 1494 aa34.67■■■■□ 3.14
THSD4-207ENST00000620694 CARD11Q9BXL7 1154 aa34.66■■■■□ 3.14
THSD4-207ENST00000620694 ANKARQ7Z5J8 1434 aa34.65■■■■□ 3.14
THSD4-207ENST00000620694 NPHP3Q7Z494 1330 aa34.64■■■■□ 3.14
THSD4-207ENST00000620694 LRRC59Q96AG4 307 aaKnown RBP34.63■■■■□ 3.13
THSD4-207ENST00000620694 FOXO3O43524 673 aa34.62■■■■□ 3.13
THSD4-207ENST00000620694 SOS2Q07890 1332 aaPredicted RBP34.61■■■■□ 3.13
THSD4-207ENST00000620694 PHF8Q9UPP1 1060 aa34.61■■■■□ 3.13
THSD4-207ENST00000620694 CDK19Q9BWU1 502 aa34.6■■■■□ 3.13
THSD4-207ENST00000620694 TULP4Q9NRJ4 1543 aa34.6■■■■□ 3.13
THSD4-207ENST00000620694 DISP3Q9P2K9 1392 aa34.58■■■■□ 3.13
THSD4-207ENST00000620694 MED1Q15648 1581 aaPredicted RBP34.57■■■■□ 3.13
THSD4-207ENST00000620694 PRR36Q9H6K5 1346 aa34.57■■■■□ 3.13
THSD4-207ENST00000620694 KIF1AQ12756 1690 aa34.56■■■■□ 3.12
THSD4-207ENST00000620694 USP32Q8NFA0 1604 aa34.55■■■■□ 3.12
THSD4-207ENST00000620694 XPCQ01831 940 aaPredicted RBP34.54■■■■□ 3.12
THSD4-207ENST00000620694 PMFBP1Q8TBY8 1022 aa34.54■■■■□ 3.12
THSD4-207ENST00000620694 NUDT16Q96DE0 195 aaKnown RBP34.53■■■■□ 3.12
THSD4-207ENST00000620694 QRICH2Q9H0J4 1663 aa34.53■■■■□ 3.12
THSD4-207ENST00000620694 SPATA31A6Q5VVP1 1343 aa34.53■■■■□ 3.12
THSD4-207ENST00000620694 RGPD8O14715 1765 aaPredicted RBP34.51■■■■□ 3.12
THSD4-207ENST00000620694 SRPK2P78362 688 aaKnown RBP34.51■■■■□ 3.12
THSD4-207ENST00000620694 PXDNQ92626 1479 aa34.51■■■■□ 3.11
THSD4-207ENST00000620694 KRT28Q7Z3Y7 464 aa34.49■■■■□ 3.11
THSD4-207ENST00000620694 ATP7BP35670 1465 aa34.49■■■■□ 3.11
THSD4-207ENST00000620694 SHPRHQ149N8 1683 aa34.49■■■■□ 3.11
THSD4-207ENST00000620694 PNPLA6Q8IY17 1366 aa34.49■■■■□ 3.11
THSD4-207ENST00000620694 PSME1Q06323 249 aa34.47■■■■□ 3.11
THSD4-207ENST00000620694 PHF23Q9BUL5 403 aaPredicted RBP34.47■■■■□ 3.11
THSD4-207ENST00000620694 EVC2Q86UK5 1308 aa34.47■■■■□ 3.11
THSD4-207ENST00000620694 CCDC61Q9Y6R9 512 aa34.46■■■■□ 3.11
THSD4-207ENST00000620694 CABP2Q9NPB3 220 aa34.45■■■■□ 3.11
THSD4-207ENST00000620694 NUTM2BA6NNL0 878 aaPredicted RBP34.43■■■■□ 3.1
THSD4-207ENST00000620694 NUTM2EB1AL46 878 aaPredicted RBP34.43■■■■□ 3.1
THSD4-207ENST00000620694 NUTM2AQ8IVF1 878 aaPredicted RBP34.43■■■■□ 3.1
THSD4-207ENST00000620694 NGDNQ8NEJ9 315 aaKnown RBP34.43■■■■□ 3.1
THSD4-207ENST00000620694 SBNO2Q9Y2G9 1366 aa34.4■■■■□ 3.1
THSD4-207ENST00000620694 SPATA31A3Q5VYP0 1347 aa34.39■■■■□ 3.1
THSD4-207ENST00000620694 MEX3CQ5U5Q3 659 aaKnown RBP34.39■■■■□ 3.1
THSD4-207ENST00000620694 LRP6O75581 1613 aa34.38■■■■□ 3.09
THSD4-207ENST00000620694 ITSN1Q15811 1721 aa34.38■■■■□ 3.09
THSD4-207ENST00000620694 SBNO1A3KN83 1393 aa34.36■■■■□ 3.09
THSD4-207ENST00000620694 ST20-MTHFSA0A0A6YYL1 179 aa34.35■■■■□ 3.09
THSD4-207ENST00000620694 PLEKHG3A1L390 1219 aa34.35■■■■□ 3.09
THSD4-207ENST00000620694 TNS3Q68CZ2 1445 aa34.34■■■■□ 3.09
THSD4-207ENST00000620694 PPIP5K1Q6PFW1 1433 aa34.34■■■■□ 3.09
THSD4-207ENST00000620694 USP47Q96K76 1375 aa34.33■■■■□ 3.09
THSD4-207ENST00000620694 ACEP12821 1306 aa34.32■■■■□ 3.09
THSD4-207ENST00000620694 TOPAZ1Q8N9V7 1692 aa34.32■■■■□ 3.08
THSD4-207ENST00000620694 LMOD2Q6P5Q4 547 aa34.31■■■■□ 3.08
THSD4-207ENST00000620694 POLR3AO14802 1390 aaPredicted RBP34.31■■■■□ 3.08
THSD4-207ENST00000620694 CABP1Q9NZU7 370 aa34.3■■■■□ 3.08
THSD4-207ENST00000620694 COL22A1Q8NFW1 1626 aaPredicted RBP34.28■■■■□ 3.08
THSD4-207ENST00000620694 ARHGEF10O15013 1369 aa34.27■■■■□ 3.08
THSD4-207ENST00000620694 ATAD2Q6PL18 1390 aa34.27■■■■□ 3.08
THSD4-207ENST00000620694 SLC24A1O60721 1099 aa34.27■■■■□ 3.08
THSD4-207ENST00000620694 PAK3O75914 559 aaPredicted RBP34.27■■■■□ 3.08
THSD4-207ENST00000620694 TESK2Q96S53 571 aa34.27■■■■□ 3.08
THSD4-207ENST00000620694 ADAMTS2O95450 1211 aa34.26■■■■□ 3.08
THSD4-207ENST00000620694 RGS17Q9UGC6 210 aaPredicted RBP34.24■■■■□ 3.07
THSD4-207ENST00000620694 TRPM3Q9HCF6 1732 aaPredicted RBP34.21■■■■□ 3.07
THSD4-207ENST00000620694 C8orf37Q96NL8 207 aa34.21■■■■□ 3.07
THSD4-207ENST00000620694 PLEKHG5O94827 1062 aa34.2■■■■□ 3.07
THSD4-207ENST00000620694 HAP1P54257 671 aaPredicted RBP34.19■■■■□ 3.06
THSD4-207ENST00000620694 PUS7Q96PZ0 661 aaKnown RBP34.18■■■■□ 3.06
THSD4-207ENST00000620694 CABLES1Q8TDN4 633 aa34.17■■■■□ 3.06
THSD4-207ENST00000620694 TMF1P82094 1093 aa34.16■■■■□ 3.06
THSD4-207ENST00000620694 NGLY1Q96IV0 654 aa34.15■■■■□ 3.06
THSD4-207ENST00000620694 AFF2P51816 1311 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms