RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
VPS11-207ENST00000620429 GRPEL1Q9HAV7 217 aa13.2□□□□□ -0.3
VPS11-207ENST00000620429 UNC13BO14795 1591 aa13.2□□□□□ -0.3
VPS11-207ENST00000620429 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
VPS11-207ENST00000620429 BECN1Q14457 450 aa13.19□□□□□ -0.3
VPS11-207ENST00000620429 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
VPS11-207ENST00000620429 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
VPS11-207ENST00000620429 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
VPS11-207ENST00000620429 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
VPS11-207ENST00000620429 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
VPS11-207ENST00000620429 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
VPS11-207ENST00000620429 KIF20AO95235 890 aa13.18□□□□□ -0.3
VPS11-207ENST00000620429 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
VPS11-207ENST00000620429 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
VPS11-207ENST00000620429 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
VPS11-207ENST00000620429 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
VPS11-207ENST00000620429 ARXQ96QS3 562 aa13.18□□□□□ -0.3
VPS11-207ENST00000620429 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
VPS11-207ENST00000620429 ZSCAN20P17040 1043 aaPredicted RBP13.17□□□□□ -0.3
VPS11-207ENST00000620429 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
VPS11-207ENST00000620429 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
VPS11-207ENST00000620429 STRCQ7RTU9 1775 aa13.16□□□□□ -0.3
VPS11-207ENST00000620429 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
VPS11-207ENST00000620429 MCM4P33991 863 aa13.15□□□□□ -0.3
VPS11-207ENST00000620429 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
VPS11-207ENST00000620429 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
VPS11-207ENST00000620429 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
VPS11-207ENST00000620429 USP19O94966 1318 aa13.15□□□□□ -0.3
VPS11-207ENST00000620429 C3P01024 1663 aa13.15□□□□□ -0.31
VPS11-207ENST00000620429 NPATQ14207 1427 aa13.15□□□□□ -0.31
VPS11-207ENST00000620429 A2MP01023 1474 aa13.14□□□□□ -0.31
VPS11-207ENST00000620429 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
VPS11-207ENST00000620429 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
VPS11-207ENST00000620429 ABCA6Q8N139 1617 aa13.14□□□□□ -0.31
VPS11-207ENST00000620429 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
VPS11-207ENST00000620429 E9PCH4 1651 aa13.13□□□□□ -0.31
VPS11-207ENST00000620429 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
VPS11-207ENST00000620429 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
VPS11-207ENST00000620429 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
VPS11-207ENST00000620429 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
VPS11-207ENST00000620429 TRAK2O60296 914 aa13.12□□□□□ -0.31
VPS11-207ENST00000620429 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
VPS11-207ENST00000620429 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
VPS11-207ENST00000620429 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
VPS11-207ENST00000620429 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
VPS11-207ENST00000620429 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
VPS11-207ENST00000620429 PRDM10Q9NQV6 1147 aa13.11□□□□□ -0.31
VPS11-207ENST00000620429 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
VPS11-207ENST00000620429 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
VPS11-207ENST00000620429 KIDINS220Q9ULH0 1771 aa13.1□□□□□ -0.31
VPS11-207ENST00000620429 KIF3BO15066 747 aa13.1□□□□□ -0.31
VPS11-207ENST00000620429 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
VPS11-207ENST00000620429 PPP1R9BQ96SB3 815 aa13.09□□□□□ -0.31
VPS11-207ENST00000620429 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
VPS11-207ENST00000620429 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
VPS11-207ENST00000620429 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
VPS11-207ENST00000620429 RTEL1-TNFRSF6BF6WH68 1400 aa13.09□□□□□ -0.31
VPS11-207ENST00000620429 TRPM1Q7Z4N2 1603 aa13.08□□□□□ -0.31
VPS11-207ENST00000620429 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
VPS11-207ENST00000620429 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
VPS11-207ENST00000620429 NLRP1Q9C000 1473 aa13.08□□□□□ -0.32
VPS11-207ENST00000620429 ATP7AQ04656 1500 aa13.07□□□□□ -0.32
VPS11-207ENST00000620429 UQCRHLA0A096LP55 91 aa13.07□□□□□ -0.32
VPS11-207ENST00000620429 UQCRHP07919 91 aa13.07□□□□□ -0.32
VPS11-207ENST00000620429 BLMP54132 1417 aaPredicted RBP13.06□□□□□ -0.32
VPS11-207ENST00000620429 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
VPS11-207ENST00000620429 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
VPS11-207ENST00000620429 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
VPS11-207ENST00000620429 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
VPS11-207ENST00000620429 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
VPS11-207ENST00000620429 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 TEX2Q8IWB9 1127 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 PANK3Q9H999 370 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 ZNF500O60304 480 aaPredicted RBP13.04□□□□□ -0.32
VPS11-207ENST00000620429 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 GPRASP1Q5JY77 1395 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 TESK2Q96S53 571 aa13.04□□□□□ -0.32
VPS11-207ENST00000620429 INSRP06213 1382 aa13.03□□□□□ -0.32
VPS11-207ENST00000620429 HSPA2P54652 639 aa13.03□□□□□ -0.32
VPS11-207ENST00000620429 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.32
VPS11-207ENST00000620429 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
VPS11-207ENST00000620429 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.33
VPS11-207ENST00000620429 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
VPS11-207ENST00000620429 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
VPS11-207ENST00000620429 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
VPS11-207ENST00000620429 TBC1D2Q9BYX2 928 aa13.01□□□□□ -0.33
VPS11-207ENST00000620429 CLTCL1P53675 1640 aa13.01□□□□□ -0.33
VPS11-207ENST00000620429 DEPDC5O75140 1603 aa13□□□□□ -0.33
VPS11-207ENST00000620429 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
VPS11-207ENST00000620429 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
VPS11-207ENST00000620429 KANK1Q14678 1352 aa13□□□□□ -0.33
VPS11-207ENST00000620429 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
VPS11-207ENST00000620429 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
VPS11-207ENST00000620429 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
VPS11-207ENST00000620429 TRPM2O94759 1503 aa13□□□□□ -0.33
VPS11-207ENST00000620429 GOLGA6L2Q8N9W4 650 aaPredicted RBP13□□□□□ -0.33
VPS11-207ENST00000620429 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
VPS11-207ENST00000620429 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
VPS11-207ENST00000620429 CSPP1Q1MSJ5 1256 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms