RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 MARF1Q9Y4F3 1742 aaKnown RBP33■■■□□ 2.87
SRRT-218ENST00000620394 USP21Q9UK80 565 aa33■■■□□ 2.87
SRRT-218ENST00000620394 TRPC5Q9UL62 973 aaPredicted RBP32.99■■■□□ 2.87
SRRT-218ENST00000620394 IFT172Q9UG01 1749 aa32.97■■■□□ 2.87
SRRT-218ENST00000620394 ATRNO75882 1429 aa32.97■■■□□ 2.87
SRRT-218ENST00000620394 MYOM2P54296 1465 aa32.97■■■□□ 2.87
SRRT-218ENST00000620394 FNBP4Q8N3X1 1017 aaPredicted RBP32.96■■■□□ 2.87
SRRT-218ENST00000620394 CCDC144AA2RUR9 1427 aa32.95■■■□□ 2.87
SRRT-218ENST00000620394 SPATA31E1Q6ZUB1 1445 aa32.94■■■□□ 2.86
SRRT-218ENST00000620394 PXDNQ92626 1479 aa32.93■■■□□ 2.86
SRRT-218ENST00000620394 FOXD1Q16676 465 aa32.92■■■□□ 2.86
SRRT-218ENST00000620394 NPHP3Q7Z494 1330 aa32.92■■■□□ 2.86
SRRT-218ENST00000620394 MPHOSPH9Q99550 1183 aa32.9■■■□□ 2.86
SRRT-218ENST00000620394 ACIN1Q9UKV3 1341 aaKnown RBP32.9■■■□□ 2.86
SRRT-218ENST00000620394 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.89■■■□□ 2.86
SRRT-218ENST00000620394 KNDC1Q76NI1 1749 aa32.85■■■□□ 2.85
SRRT-218ENST00000620394 BCL9LQ86UU0 1499 aa32.85■■■□□ 2.85
SRRT-218ENST00000620394 ESCO1Q5FWF5 840 aa32.84■■■□□ 2.85
SRRT-218ENST00000620394 TECPR2O15040 1411 aa32.84■■■□□ 2.85
SRRT-218ENST00000620394 LRPPRCP42704 1394 aaKnown RBP32.83■■■□□ 2.85
SRRT-218ENST00000620394 KIF1AQ12756 1690 aa32.82■■■□□ 2.84
SRRT-218ENST00000620394 ANKRD30BQ9BXX2 1392 aa32.81■■■□□ 2.84
SRRT-218ENST00000620394 FMN2Q9NZ56 1722 aa32.79■■■□□ 2.84
SRRT-218ENST00000620394 ZRANB1Q9UGI0 708 aa32.77■■■□□ 2.84
SRRT-218ENST00000620394 PIK3C2GO75747 1445 aa32.77■■■□□ 2.84
SRRT-218ENST00000620394 ADGRF5Q8IZF2 1346 aa32.77■■■□□ 2.84
SRRT-218ENST00000620394 EP400Q96L91 3159 aa32.76■■■□□ 2.84
SRRT-218ENST00000620394 CCDC125Q86Z20 511 aa32.76■■■□□ 2.83
SRRT-218ENST00000620394 RAB3GAP2Q9H2M9 1393 aa32.75■■■□□ 2.83
SRRT-218ENST00000620394 USP32Q8NFA0 1604 aa32.74■■■□□ 2.83
SRRT-218ENST00000620394 FOXO3O43524 673 aa32.74■■■□□ 2.83
SRRT-218ENST00000620394 XPCQ01831 940 aaPredicted RBP32.73■■■□□ 2.83
SRRT-218ENST00000620394 GLI3P10071 1580 aa32.72■■■□□ 2.83
SRRT-218ENST00000620394 GJD4Q96KN9 370 aaPredicted RBP32.72■■■□□ 2.83
SRRT-218ENST00000620394 SLIT2O94813 1529 aa32.72■■■□□ 2.83
SRRT-218ENST00000620394 SRCAPQ6ZRS2 3230 aa32.7■■■□□ 2.83
SRRT-218ENST00000620394 RGL3Q3MIN7 710 aa32.7■■■□□ 2.83
SRRT-218ENST00000620394 ABCC11Q96J66 1382 aa32.7■■■□□ 2.82
SRRT-218ENST00000620394 NRXN1Q9ULB1 1477 aa32.69■■■□□ 2.82
SRRT-218ENST00000620394 RALGAPBQ86X10 1494 aa32.68■■■□□ 2.82
SRRT-218ENST00000620394 WAPLQ7Z5K2 1190 aa32.65■■■□□ 2.82
SRRT-218ENST00000620394 STK26Q9P289 416 aa32.65■■■□□ 2.82
SRRT-218ENST00000620394 NUTM2FA1L443 756 aa32.64■■■□□ 2.82
SRRT-218ENST00000620394 BLMP54132 1417 aaPredicted RBP32.64■■■□□ 2.82
SRRT-218ENST00000620394 SPATA31A3Q5VYP0 1347 aa32.64■■■□□ 2.82
SRRT-218ENST00000620394 BRWD3Q6RI45 1802 aa32.64■■■□□ 2.82
SRRT-218ENST00000620394 UNC5CLQ8IV45 518 aa32.64■■■□□ 2.82
SRRT-218ENST00000620394 PLEKHH1Q9ULM0 1364 aa32.64■■■□□ 2.82
SRRT-218ENST00000620394 PLCH1Q4KWH8 1693 aa32.62■■■□□ 2.81
SRRT-218ENST00000620394 ABCA3Q99758 1704 aa32.62■■■□□ 2.81
SRRT-218ENST00000620394 NWD2Q9ULI1 1742 aa32.62■■■□□ 2.81
SRRT-218ENST00000620394 YTHDC2Q9H6S0 1430 aaKnown RBP32.61■■■□□ 2.81
SRRT-218ENST00000620394 RGPD8O14715 1765 aaPredicted RBP32.6■■■□□ 2.81
SRRT-218ENST00000620394 TNS3Q68CZ2 1445 aa32.6■■■□□ 2.81
SRRT-218ENST00000620394 TMEM132EQ6IEE7 984 aa32.56■■■□□ 2.8
SRRT-218ENST00000620394 KRT28Q7Z3Y7 464 aa32.53■■■□□ 2.8
SRRT-218ENST00000620394 C14orf93Q9H972 538 aaKnown RBP32.52■■■□□ 2.8
SRRT-218ENST00000620394 HRCP23327 699 aa32.51■■■□□ 2.79
SRRT-218ENST00000620394 HAP1P54257 671 aaPredicted RBP32.51■■■□□ 2.79
SRRT-218ENST00000620394 SIRT1Q96EB6 747 aa32.5■■■□□ 2.79
SRRT-218ENST00000620394 LRP5O75197 1615 aa32.48■■■□□ 2.79
SRRT-218ENST00000620394 SBNO1A3KN83 1393 aa32.48■■■□□ 2.79
SRRT-218ENST00000620394 PSME1Q06323 249 aa32.48■■■□□ 2.79
SRRT-218ENST00000620394 VPS72Q15906 364 aa32.48■■■□□ 2.79
SRRT-218ENST00000620394 PHF8Q9UPP1 1060 aa32.48■■■□□ 2.79
SRRT-218ENST00000620394 ARHGEF10O15013 1369 aa32.47■■■□□ 2.79
SRRT-218ENST00000620394 SF3B2Q13435 895 aaKnown RBP32.46■■■□□ 2.79
SRRT-218ENST00000620394 DLC1Q96QB1 1528 aa32.46■■■□□ 2.79
SRRT-218ENST00000620394 ADGRB1O14514 1584 aa32.45■■■□□ 2.79
SRRT-218ENST00000620394 SEPT12Q8IYM1 358 aa32.45■■■□□ 2.79
SRRT-218ENST00000620394 NRAPQ86VF7 1730 aa32.45■■■□□ 2.78
SRRT-218ENST00000620394 ADGRB2O60241 1585 aa32.45■■■□□ 2.78
SRRT-218ENST00000620394 DHX57Q6P158 1386 aaKnown RBP32.43■■■□□ 2.78
SRRT-218ENST00000620394 CFAP70Q5T0N1 1121 aa32.42■■■□□ 2.78
SRRT-218ENST00000620394 ANKARQ7Z5J8 1434 aa32.42■■■□□ 2.78
SRRT-218ENST00000620394 DEFB132Q7Z7B7 95 aa32.41■■■□□ 2.78
SRRT-218ENST00000620394 CABLES1Q8TDN4 633 aa32.4■■■□□ 2.78
SRRT-218ENST00000620394 TRPM3Q9HCF6 1732 aaPredicted RBP32.4■■■□□ 2.78
SRRT-218ENST00000620394 CCDC9Q9Y3X0 531 aaKnown RBP32.39■■■□□ 2.78
SRRT-218ENST00000620394 ONECUT3O60422 494 aaPredicted RBP32.38■■■□□ 2.77
SRRT-218ENST00000620394 KRT27Q7Z3Y8 459 aa32.37■■■□□ 2.77
SRRT-218ENST00000620394 ALS2Q96Q42 1657 aa32.36■■■□□ 2.77
SRRT-218ENST00000620394 COL14A1Q05707 1796 aaKnown RBP32.35■■■□□ 2.77
SRRT-218ENST00000620394 LMOD2Q6P5Q4 547 aa32.35■■■□□ 2.77
SRRT-218ENST00000620394 PRAM1Q96QH2 718 aa32.34■■■□□ 2.77
SRRT-218ENST00000620394 RGPD1P0DJD0 1748 aa32.33■■■□□ 2.77
SRRT-218ENST00000620394 PLEKHG5O94827 1062 aa32.32■■■□□ 2.76
SRRT-218ENST00000620394 STAC3Q96MF2 364 aa32.32■■■□□ 2.76
SRRT-218ENST00000620394 SAFB2Q14151 953 aaKnown RBP eCLIP32.3■■■□□ 2.76
SRRT-218ENST00000620394 CRYBG1Q9Y4K1 1723 aa32.29■■■□□ 2.76
SRRT-218ENST00000620394 EIF3AQ14152 1382 aaKnown RBP32.29■■■□□ 2.76
SRRT-218ENST00000620394 A0A0G2JS52 829 aa32.28■■■□□ 2.76
SRRT-218ENST00000620394 MYT1Q01538 1121 aa32.28■■■□□ 2.76
SRRT-218ENST00000620394 FAM83GA6ND36 823 aa32.27■■■□□ 2.76
SRRT-218ENST00000620394 BAG6P46379 1132 aa32.27■■■□□ 2.76
SRRT-218ENST00000620394 TULP4Q9NRJ4 1543 aa32.26■■■□□ 2.76
SRRT-218ENST00000620394 PMFBP1Q8TBY8 1022 aa32.26■■■□□ 2.75
SRRT-218ENST00000620394 POGKQ9P215 609 aa32.26■■■□□ 2.75
SRRT-218ENST00000620394 DCAF11Q8TEB1 546 aa32.25■■■□□ 2.75
SRRT-218ENST00000620394 GPRASP1Q5JY77 1395 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms