RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 NSD3Q9BZ95 1437 aa15.31■□□□□ 0.04
SPCS1-206ENST00000619898 SCAF11Q99590 1463 aaKnown RBP15.3■□□□□ 0.04
SPCS1-206ENST00000619898 SKOR2Q2VWA4 1001 aaPredicted RBP15.29■□□□□ 0.04
SPCS1-206ENST00000619898 NOB1Q9ULX3 412 aaKnown RBP15.29■□□□□ 0.04
SPCS1-206ENST00000619898 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
SPCS1-206ENST00000619898 MCCP23508 829 aa15.29■□□□□ 0.04
SPCS1-206ENST00000619898 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
SPCS1-206ENST00000619898 HMOX1P09601 288 aa15.29■□□□□ 0.04
SPCS1-206ENST00000619898 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
SPCS1-206ENST00000619898 MCM4P33991 863 aa15.28■□□□□ 0.04
SPCS1-206ENST00000619898 MRE11P49959 708 aa15.28■□□□□ 0.04
SPCS1-206ENST00000619898 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
SPCS1-206ENST00000619898 ATF7IPQ6VMQ6 1270 aa15.28■□□□□ 0.04
SPCS1-206ENST00000619898 SLC4A10Q6U841 1118 aa15.28■□□□□ 0.04
SPCS1-206ENST00000619898 SHANK2Q9UPX8 1470 aa15.28■□□□□ 0.04
SPCS1-206ENST00000619898 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
SPCS1-206ENST00000619898 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.04
SPCS1-206ENST00000619898 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.04
SPCS1-206ENST00000619898 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.04
SPCS1-206ENST00000619898 KDM2BQ8NHM5 1336 aa15.27■□□□□ 0.03
SPCS1-206ENST00000619898 KDM5CP41229 1560 aa15.26■□□□□ 0.03
SPCS1-206ENST00000619898 ST18O60284 1047 aa15.26■□□□□ 0.03
SPCS1-206ENST00000619898 NOL8Q76FK4 1167 aaKnown RBP15.26■□□□□ 0.03
SPCS1-206ENST00000619898 HSP90AA2PQ14568 343 aaPredicted RBP15.26■□□□□ 0.03
SPCS1-206ENST00000619898 C1orf115Q9H7X2 142 aa15.25■□□□□ 0.03
SPCS1-206ENST00000619898 A2MP01023 1474 aa15.25■□□□□ 0.03
SPCS1-206ENST00000619898 NUP160Q12769 1436 aa15.25■□□□□ 0.03
SPCS1-206ENST00000619898 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
SPCS1-206ENST00000619898 HMMRO75330 724 aa15.24■□□□□ 0.03
SPCS1-206ENST00000619898 ASXL1Q8IXJ9 1541 aa15.24■□□□□ 0.03
SPCS1-206ENST00000619898 SYCP2Q9BX26 1530 aa15.24■□□□□ 0.03
SPCS1-206ENST00000619898 PBRM1Q86U86 1689 aa15.24■□□□□ 0.03
SPCS1-206ENST00000619898 CT47B1P0C2W7 299 aaPredicted RBP15.23■□□□□ 0.03
SPCS1-206ENST00000619898 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
SPCS1-206ENST00000619898 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
SPCS1-206ENST00000619898 OS9Q13438 667 aaPredicted RBP15.23■□□□□ 0.03
SPCS1-206ENST00000619898 BLMP54132 1417 aaPredicted RBP15.23■□□□□ 0.03
SPCS1-206ENST00000619898 SEC24BO95487 1268 aa15.23■□□□□ 0.03
SPCS1-206ENST00000619898 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 TMEM57Q8N5G2 664 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 TMPOP42166 694 aaKnown RBP15.22■□□□□ 0.03
SPCS1-206ENST00000619898 GNAI1P63096 354 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 TBC1D32Q96NH3 1257 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
SPCS1-206ENST00000619898 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
SPCS1-206ENST00000619898 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.02
SPCS1-206ENST00000619898 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
SPCS1-206ENST00000619898 COG3Q96JB2 828 aa15.2■□□□□ 0.02
SPCS1-206ENST00000619898 STK31Q9BXU1 1019 aa15.2■□□□□ 0.02
SPCS1-206ENST00000619898 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
SPCS1-206ENST00000619898 ARID3AQ99856 593 aa15.2■□□□□ 0.02
SPCS1-206ENST00000619898 BCORL1Q5H9F3 1711 aa15.2■□□□□ 0.02
SPCS1-206ENST00000619898 CDC45O75419 566 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 CARD14Q9BXL6 1004 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 KCNJ4P48050 445 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 CHD1LQ86WJ1 897 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 RLBP1P12271 317 aa15.19■□□□□ 0.02
SPCS1-206ENST00000619898 MCTP1Q6DN14 999 aa15.18■□□□□ 0.02
SPCS1-206ENST00000619898 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
SPCS1-206ENST00000619898 TRIM27P14373 513 aa15.18■□□□□ 0.02
SPCS1-206ENST00000619898 FOXD4L6Q3SYB3 417 aaPredicted RBP15.18■□□□□ 0.02
SPCS1-206ENST00000619898 FOXD4L3Q6VB84 417 aaPredicted RBP15.18■□□□□ 0.02
SPCS1-206ENST00000619898 GRPEL1Q9HAV7 217 aa15.18■□□□□ 0.02
SPCS1-206ENST00000619898 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
SPCS1-206ENST00000619898 INSRP06213 1382 aa15.17■□□□□ 0.02
SPCS1-206ENST00000619898 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
SPCS1-206ENST00000619898 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
SPCS1-206ENST00000619898 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
SPCS1-206ENST00000619898 REC8O95072 547 aa15.17■□□□□ 0.02
SPCS1-206ENST00000619898 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
SPCS1-206ENST00000619898 NUCB2P80303 420 aa15.16■□□□□ 0.02
SPCS1-206ENST00000619898 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
SPCS1-206ENST00000619898 NASPP49321 788 aaPredicted RBP15.16■□□□□ 0.02
SPCS1-206ENST00000619898 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
SPCS1-206ENST00000619898 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
SPCS1-206ENST00000619898 RILPL2Q969X0 211 aa15.16■□□□□ 0.02
SPCS1-206ENST00000619898 TWISTNBQ3B726 338 aaPredicted RBP15.15■□□□□ 0.02
SPCS1-206ENST00000619898 VSIG10Q8N0Z9 540 aa15.15■□□□□ 0.02
SPCS1-206ENST00000619898 CABP1Q9NZU7 370 aa15.15■□□□□ 0.02
SPCS1-206ENST00000619898 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
SPCS1-206ENST00000619898 FAM69CQ0P6D2 419 aa15.14■□□□□ 0.01
SPCS1-206ENST00000619898 K7ELQ4 463 aaPredicted RBP15.14■□□□□ 0.01
SPCS1-206ENST00000619898 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
SPCS1-206ENST00000619898 NOS1P29475 1434 aa15.13■□□□□ 0.01
SPCS1-206ENST00000619898 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
SPCS1-206ENST00000619898 POLR3AO14802 1390 aaPredicted RBP15.13■□□□□ 0.01
SPCS1-206ENST00000619898 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
SPCS1-206ENST00000619898 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
SPCS1-206ENST00000619898 CAVIN1Q6NZI2 390 aaKnown RBP15.12■□□□□ 0.01
SPCS1-206ENST00000619898 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
SPCS1-206ENST00000619898 GOLGA6L4A6NEF3 574 aa15.12■□□□□ 0.01
SPCS1-206ENST00000619898 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
SPCS1-206ENST00000619898 TRAPPC8Q9Y2L5 1435 aa15.12■□□□□ 0.01
SPCS1-206ENST00000619898 ESPNB1AK53 854 aa15.11■□□□□ 0.01
SPCS1-206ENST00000619898 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
SPCS1-206ENST00000619898 ISY1Q9ULR0 285 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms