RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 ARHGEF12Q9NZN5 1544 aa16.47■□□□□ 0.23
CYFIP1-211ENST00000619348 RSPH4AQ5TD94 716 aa16.47■□□□□ 0.23
CYFIP1-211ENST00000619348 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
CYFIP1-211ENST00000619348 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
CYFIP1-211ENST00000619348 A2MP01023 1474 aa16.46■□□□□ 0.23
CYFIP1-211ENST00000619348 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
CYFIP1-211ENST00000619348 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
CYFIP1-211ENST00000619348 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
CYFIP1-211ENST00000619348 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
CYFIP1-211ENST00000619348 RIPK4P57078 832 aa16.45■□□□□ 0.22
CYFIP1-211ENST00000619348 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
CYFIP1-211ENST00000619348 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
CYFIP1-211ENST00000619348 TPM2P07951 284 aa16.44■□□□□ 0.22
CYFIP1-211ENST00000619348 PRDM10Q9NQV6 1147 aa16.44■□□□□ 0.22
CYFIP1-211ENST00000619348 PRPF40AO75400 957 aaKnown RBP16.44■□□□□ 0.22
CYFIP1-211ENST00000619348 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
CYFIP1-211ENST00000619348 ZSCAN30Q86W11 494 aa16.43■□□□□ 0.22
CYFIP1-211ENST00000619348 CCDC173Q0VFZ6 552 aa16.43■□□□□ 0.22
CYFIP1-211ENST00000619348 POLR1AO95602 1720 aaPredicted RBP16.43■□□□□ 0.22
CYFIP1-211ENST00000619348 FAM135AQ9P2D6 1515 aa16.42■□□□□ 0.22
CYFIP1-211ENST00000619348 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
CYFIP1-211ENST00000619348 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
CYFIP1-211ENST00000619348 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
CYFIP1-211ENST00000619348 SPAG9O60271 1321 aaKnown RBP16.41■□□□□ 0.22
CYFIP1-211ENST00000619348 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
CYFIP1-211ENST00000619348 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
CYFIP1-211ENST00000619348 NINLQ9Y2I6 1382 aa16.4■□□□□ 0.22
CYFIP1-211ENST00000619348 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
CYFIP1-211ENST00000619348 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
CYFIP1-211ENST00000619348 GGT6Q6P531 493 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 UQCRHLA0A096LP55 91 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 UQCRHP07919 91 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 AAMPQ13685 434 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
CYFIP1-211ENST00000619348 PTPRGP23470 1445 aa16.38■□□□□ 0.21
CYFIP1-211ENST00000619348 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
CYFIP1-211ENST00000619348 CD2BP2O95400 341 aaKnown RBP16.38■□□□□ 0.21
CYFIP1-211ENST00000619348 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
CYFIP1-211ENST00000619348 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
CYFIP1-211ENST00000619348 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
CYFIP1-211ENST00000619348 PTMSP20962 102 aa16.37■□□□□ 0.21
CYFIP1-211ENST00000619348 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
CYFIP1-211ENST00000619348 HMOX1P09601 288 aa16.36■□□□□ 0.21
CYFIP1-211ENST00000619348 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
CYFIP1-211ENST00000619348 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
CYFIP1-211ENST00000619348 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
CYFIP1-211ENST00000619348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
CYFIP1-211ENST00000619348 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
CYFIP1-211ENST00000619348 CCDC141Q6ZP82 1450 aa16.35■□□□□ 0.21
CYFIP1-211ENST00000619348 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
CYFIP1-211ENST00000619348 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
CYFIP1-211ENST00000619348 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
CYFIP1-211ENST00000619348 SYCE3A1L190 88 aa16.35■□□□□ 0.21
CYFIP1-211ENST00000619348 ARHGAP5Q13017 1502 aa16.34■□□□□ 0.21
CYFIP1-211ENST00000619348 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
CYFIP1-211ENST00000619348 ZHX1Q9UKY1 873 aaPredicted RBP16.34■□□□□ 0.21
CYFIP1-211ENST00000619348 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
CYFIP1-211ENST00000619348 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.21
CYFIP1-211ENST00000619348 FBLN1P23142 703 aa16.33■□□□□ 0.2
CYFIP1-211ENST00000619348 INSRP06213 1382 aa16.33■□□□□ 0.2
CYFIP1-211ENST00000619348 KANK1Q14678 1352 aa16.32■□□□□ 0.2
CYFIP1-211ENST00000619348 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 ST18O60284 1047 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 CDC45O75419 566 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 SCAF11Q99590 1463 aaKnown RBP16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 ATP10BO94823 1461 aa16.31■□□□□ 0.2
CYFIP1-211ENST00000619348 SOX12O15370 315 aa16.3■□□□□ 0.2
CYFIP1-211ENST00000619348 NUCB2P80303 420 aa16.3■□□□□ 0.2
CYFIP1-211ENST00000619348 PKP1Q13835 747 aa16.3■□□□□ 0.2
CYFIP1-211ENST00000619348 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
CYFIP1-211ENST00000619348 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
CYFIP1-211ENST00000619348 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
CYFIP1-211ENST00000619348 NUCB1Q02818 461 aa16.29■□□□□ 0.2
CYFIP1-211ENST00000619348 MINK1Q8N4C8 1332 aaPredicted RBP16.29■□□□□ 0.2
CYFIP1-211ENST00000619348 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
CYFIP1-211ENST00000619348 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
CYFIP1-211ENST00000619348 SLC4A10Q6U841 1118 aa16.29■□□□□ 0.2
CYFIP1-211ENST00000619348 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
CYFIP1-211ENST00000619348 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 RBSNQ9H1K0 784 aa16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 OFD1O75665 1012 aa16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
CYFIP1-211ENST00000619348 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.2
CYFIP1-211ENST00000619348 TSC1Q92574 1164 aa16.27■□□□□ 0.2
CYFIP1-211ENST00000619348 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
CYFIP1-211ENST00000619348 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
CYFIP1-211ENST00000619348 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms