RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-223	ENST00000619193	AGL	P35573	1532 aa		7.98	□□□□□ -1.13
RDM1-223	ENST00000619193	RTEL1-TNFRSF6B	F6WH68	1400 aa		7.97	□□□□□ -1.13
RDM1-223	ENST00000619193	SENP3-EIF4A1	A0A087X0R7	540 aa		7.97	□□□□□ -1.13
RDM1-223	ENST00000619193	AKT1S1	Q96B36	256 aa		7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	CDCA7L	Q96GN5	454 aa		7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	POLR3GL	Q9BT43	218 aa		7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	NOP58	Q9Y2X3	529 aa	Known RBP	7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	XIRP1	Q702N8	1843 aa	Known RBP	7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	NPC1L1	Q9UHC9	1359 aa		7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	PLEKHH1	Q9ULM0	1364 aa		7.96	□□□□□ -1.14
RDM1-223	ENST00000619193	CLTC	Q00610	1675 aa	Known RBP	7.95	□□□□□ -1.14
RDM1-223	ENST00000619193	NRXN1	Q9ULB1	1477 aa		7.95	□□□□□ -1.14
RDM1-223	ENST00000619193	CCDC136	Q96JN2	1154 aa		7.95	□□□□□ -1.14
RDM1-223	ENST00000619193	RCAN3	Q9UKA8	241 aa		7.95	□□□□□ -1.14
RDM1-223	ENST00000619193	LRP6	O75581	1613 aa		7.95	□□□□□ -1.14
RDM1-223	ENST00000619193	PIK3C2G	O75747	1445 aa		7.95	□□□□□ -1.14
RDM1-223	ENST00000619193	MYOM2	P54296	1465 aa		7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	SCAF11	Q99590	1463 aa	Known RBP	7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	ASXL1	Q8IXJ9	1541 aa		7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	AMER1	Q5JTC6	1135 aa	Predicted RBP	7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	PANK3	Q9H999	370 aa		7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	ZC3H13	Q5T200	1668 aa	Known RBP	7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	KDM2B	Q8NHM5	1336 aa		7.94	□□□□□ -1.14
RDM1-223	ENST00000619193	TRMT2A	Q8IZ69	625 aa	Known RBP	7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	RBM33	Q96EV2	1170 aa	Known RBP	7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	ESF1	Q9H501	851 aa	Known RBP	7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	ZMYM3	Q14202	1370 aa		7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	ERVK-7	P63135	1459 aa		7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	ATP7A	Q04656	1500 aa		7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	LMTK2	Q8IWU2	1503 aa		7.93	□□□□□ -1.14
RDM1-223	ENST00000619193	SHPRH	Q149N8	1683 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	ROBO1	Q9Y6N7	1651 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	TCERG1	O14776	1098 aa	Known RBP	7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	MS4A1	P11836	297 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	PPP2R1A	P30153	589 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	CNGB1	Q14028	1251 aa	Predicted RBP	7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	AFAP1	Q8N556	730 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	IPO9	Q96P70	1041 aa	Known RBP	7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	BACH2	Q9BYV9	841 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	ZNF518A	Q6AHZ1	1483 aa		7.92	□□□□□ -1.14
RDM1-223	ENST00000619193	RGL3	Q3MIN7	710 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	CRBN	Q96SW2	442 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	MYT1L	Q9UL68	1186 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	SSUH2	Q9Y2M2	353 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	A2ML1	A8K2U0	1454 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	ADGRB3	O60242	1522 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	EFCAB6	Q5THR3	1501 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	UGGT1	Q9NYU2	1555 aa		7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	KDM5A	P29375	1690 aa	Known RBP	7.91	□□□□□ -1.14
RDM1-223	ENST00000619193	KIDINS220	Q9ULH0	1771 aa		7.9	□□□□□ -1.14
RDM1-223	ENST00000619193	RGS12	O14924	1447 aa		7.9	□□□□□ -1.14
RDM1-223	ENST00000619193	PDE4A	P27815	886 aa		7.9	□□□□□ -1.14
RDM1-223	ENST00000619193	C20orf194	Q5TEA3	1177 aa		7.9	□□□□□ -1.14
RDM1-223	ENST00000619193	DUSP27	Q5VZP5	1158 aa		7.9	□□□□□ -1.14
RDM1-223	ENST00000619193	ZNF692	Q9BU19	519 aa	Predicted RBP	7.9	□□□□□ -1.14
RDM1-223	ENST00000619193	DEK	P35659	375 aa	Known RBP	7.89	□□□□□ -1.15
RDM1-223	ENST00000619193	TMF1	P82094	1093 aa		7.89	□□□□□ -1.15
RDM1-223	ENST00000619193	CC2D1B	Q5T0F9	858 aa	Known RBP	7.89	□□□□□ -1.15
RDM1-223	ENST00000619193	EFCAB2	Q5VUJ9	269 aa		7.89	□□□□□ -1.15
RDM1-223	ENST00000619193	ADAMTS8	Q9UP79	889 aa		7.89	□□□□□ -1.15
RDM1-223	ENST00000619193	USP32	Q8NFA0	1604 aa		7.89	□□□□□ -1.15
RDM1-223	ENST00000619193	ADGRB1	O14514	1584 aa		7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	NPHP4	O75161	1426 aa	Predicted RBP	7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	SBNO2	Q9Y2G9	1366 aa		7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	PLIN1	O60240	522 aa		7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	SKAP1	Q86WV1	359 aa		7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	REM2	Q8IYK8	340 aa	Predicted RBP	7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	STAC3	Q96MF2	364 aa		7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	LRP5	O75197	1615 aa		7.88	□□□□□ -1.15
RDM1-223	ENST00000619193	FAM135B	Q49AJ0	1406 aa		7.87	□□□□□ -1.15
RDM1-223	ENST00000619193	PPL	O60437	1756 aa		7.87	□□□□□ -1.15
RDM1-223	ENST00000619193	SLFN5	Q08AF3	891 aa		7.87	□□□□□ -1.15
RDM1-223	ENST00000619193	ZRANB1	Q9UGI0	708 aa		7.87	□□□□□ -1.15
RDM1-223	ENST00000619193	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.87	□□□□□ -1.15
RDM1-223	ENST00000619193	PHLPP1	O60346	1717 aa		7.86	□□□□□ -1.15
RDM1-223	ENST00000619193	VIRMA	Q69YN4	1812 aa	Known RBP	7.86	□□□□□ -1.15
RDM1-223	ENST00000619193	MLH3	Q9UHC1	1453 aa		7.86	□□□□□ -1.15
RDM1-223	ENST00000619193	PIK3C2B	O00750	1634 aa		7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	KIF1B	O60333	1816 aa		7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	SPAG9	O60271	1321 aa	Known RBP	7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	ERICH6	Q7L0X2	663 aa		7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	CARD14	Q9BXL6	1004 aa		7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	SALL2	Q9Y467	1007 aa	Predicted RBP	7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	MED14	O60244	1454 aa		7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	COL16A1	Q07092	1604 aa	Predicted RBP	7.85	□□□□□ -1.15
RDM1-223	ENST00000619193	EIF3A	Q14152	1382 aa	Known RBP	7.84	□□□□□ -1.15
RDM1-223	ENST00000619193	ADGRF5	Q8IZF2	1346 aa		7.84	□□□□□ -1.15
RDM1-223	ENST00000619193	RXRB	P28702	533 aa		7.84	□□□□□ -1.15
RDM1-223	ENST00000619193	ANP32A	P39687	249 aa	Known RBP	7.84	□□□□□ -1.15
RDM1-223	ENST00000619193	C8orf34	Q49A92	452 aa		7.83	□□□□□ -1.16
RDM1-223	ENST00000619193	ADGRB2	O60241	1585 aa		7.83	□□□□□ -1.16
RDM1-223	ENST00000619193	POLR3A	O14802	1390 aa	Predicted RBP	7.83	□□□□□ -1.16
RDM1-223	ENST00000619193	JCAD	Q9P266	1359 aa		7.83	□□□□□ -1.16
RDM1-223	ENST00000619193	QRICH2	Q9H0J4	1663 aa		7.83	□□□□□ -1.16
RDM1-223	ENST00000619193	NKTR	P30414	1462 aa	Known RBP	7.82	□□□□□ -1.16
RDM1-223	ENST00000619193	NLRP1	Q9C000	1473 aa		7.82	□□□□□ -1.16
RDM1-223	ENST00000619193	SPDYE4	A6NLX3	237 aa		7.82	□□□□□ -1.16
RDM1-223	ENST00000619193	ZNF772	Q68DY9	489 aa	Predicted RBP	7.82	□□□□□ -1.16
RDM1-223	ENST00000619193	CHRDL2	Q6WN34	429 aa		7.82	□□□□□ -1.16
RDM1-223	ENST00000619193	TULP4	Q9NRJ4	1543 aa		7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms