RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 ZMYND15Q9H091 742 aa17.5■□□□□ 0.39
CNTNAP3B-215ENST00000619138 FRMPD1Q5SYB0 1578 aa17.5■□□□□ 0.39
CNTNAP3B-215ENST00000619138 RALGAPBQ86X10 1494 aa17.49■□□□□ 0.39
CNTNAP3B-215ENST00000619138 NOS1P29475 1434 aa17.49■□□□□ 0.39
CNTNAP3B-215ENST00000619138 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
CNTNAP3B-215ENST00000619138 TET3O43151 1660 aa17.49■□□□□ 0.39
CNTNAP3B-215ENST00000619138 LRPPRCP42704 1394 aaKnown RBP17.48■□□□□ 0.39
CNTNAP3B-215ENST00000619138 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
CNTNAP3B-215ENST00000619138 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
CNTNAP3B-215ENST00000619138 PTPRTO14522 1441 aa17.47■□□□□ 0.39
CNTNAP3B-215ENST00000619138 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
CNTNAP3B-215ENST00000619138 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
CNTNAP3B-215ENST00000619138 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
CNTNAP3B-215ENST00000619138 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
CNTNAP3B-215ENST00000619138 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
CNTNAP3B-215ENST00000619138 TRPM2O94759 1503 aa17.46■□□□□ 0.39
CNTNAP3B-215ENST00000619138 ABCC3O15438 1527 aa17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 EFCAB6Q5THR3 1501 aa17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 EIF2AK4Q9P2K8 1649 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 PPRC1Q5VV67 1664 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3B-215ENST00000619138 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
CNTNAP3B-215ENST00000619138 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
CNTNAP3B-215ENST00000619138 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
CNTNAP3B-215ENST00000619138 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
CNTNAP3B-215ENST00000619138 DEPDC5O75140 1603 aa17.42■□□□□ 0.38
CNTNAP3B-215ENST00000619138 TNNQ9UQP3 1299 aa17.41■□□□□ 0.38
CNTNAP3B-215ENST00000619138 BCORL1Q5H9F3 1711 aa17.41■□□□□ 0.38
CNTNAP3B-215ENST00000619138 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
CNTNAP3B-215ENST00000619138 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
CNTNAP3B-215ENST00000619138 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
CNTNAP3B-215ENST00000619138 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
CNTNAP3B-215ENST00000619138 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
CNTNAP3B-215ENST00000619138 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
CNTNAP3B-215ENST00000619138 TBC1D2Q9BYX2 928 aa17.4■□□□□ 0.38
CNTNAP3B-215ENST00000619138 TRAK2O60296 914 aa17.39■□□□□ 0.37
CNTNAP3B-215ENST00000619138 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
CNTNAP3B-215ENST00000619138 VWDEQ8N2E2 1590 aa17.38■□□□□ 0.37
CNTNAP3B-215ENST00000619138 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3B-215ENST00000619138 ZMYM3Q14202 1370 aa17.38■□□□□ 0.37
CNTNAP3B-215ENST00000619138 PER1O15534 1290 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP3B-215ENST00000619138 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP3B-215ENST00000619138 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
CNTNAP3B-215ENST00000619138 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
CNTNAP3B-215ENST00000619138 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
CNTNAP3B-215ENST00000619138 TESK2Q96S53 571 aa17.37■□□□□ 0.37
CNTNAP3B-215ENST00000619138 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
CNTNAP3B-215ENST00000619138 MCM4P33991 863 aa17.35■□□□□ 0.37
CNTNAP3B-215ENST00000619138 PDZRN3Q9UPQ7 1066 aa17.35■□□□□ 0.37
CNTNAP3B-215ENST00000619138 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
CNTNAP3B-215ENST00000619138 KIF1BO60333 1816 aa17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 FTSJ3Q8IY81 847 aaKnown RBP17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 SLFN5Q08AF3 891 aa17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
CNTNAP3B-215ENST00000619138 HSCBQ8IWL3 235 aa17.33■□□□□ 0.37
CNTNAP3B-215ENST00000619138 CAMSAP1Q5T5Y3 1602 aa17.33■□□□□ 0.37
CNTNAP3B-215ENST00000619138 LMTK2Q8IWU2 1503 aa17.33■□□□□ 0.36
CNTNAP3B-215ENST00000619138 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.36
CNTNAP3B-215ENST00000619138 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
CNTNAP3B-215ENST00000619138 ZMYM4Q5VZL5 1548 aa17.32■□□□□ 0.36
CNTNAP3B-215ENST00000619138 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
CNTNAP3B-215ENST00000619138 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
CNTNAP3B-215ENST00000619138 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
CNTNAP3B-215ENST00000619138 GPRASP1Q5JY77 1395 aa17.3■□□□□ 0.36
CNTNAP3B-215ENST00000619138 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
CNTNAP3B-215ENST00000619138 ESPNB1AK53 854 aa17.29■□□□□ 0.36
CNTNAP3B-215ENST00000619138 USP19O94966 1318 aa17.29■□□□□ 0.36
CNTNAP3B-215ENST00000619138 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
CNTNAP3B-215ENST00000619138 HDGFP51858 240 aaKnown RBP17.29■□□□□ 0.36
CNTNAP3B-215ENST00000619138 PRAM1Q96QH2 718 aa17.29■□□□□ 0.36
CNTNAP3B-215ENST00000619138 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
CNTNAP3B-215ENST00000619138 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
CNTNAP3B-215ENST00000619138 PCDHB15Q9Y5E8 787 aa17.28■□□□□ 0.36
CNTNAP3B-215ENST00000619138 TNRQ92752 1358 aa17.28■□□□□ 0.36
CNTNAP3B-215ENST00000619138 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
CNTNAP3B-215ENST00000619138 CLTCQ00610 1675 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3B-215ENST00000619138 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
CNTNAP3B-215ENST00000619138 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.36
CNTNAP3B-215ENST00000619138 NUTM2FA1L443 756 aa17.27■□□□□ 0.36
CNTNAP3B-215ENST00000619138 TXNDC2Q86VQ3 553 aa17.27■□□□□ 0.36
CNTNAP3B-215ENST00000619138 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.36
CNTNAP3B-215ENST00000619138 ERVK-7P63135 1459 aa17.27■□□□□ 0.35
CNTNAP3B-215ENST00000619138 E9PSI1 815 aa17.27■□□□□ 0.35
CNTNAP3B-215ENST00000619138 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
CNTNAP3B-215ENST00000619138 SLC12A5Q9H2X9 1139 aa17.26■□□□□ 0.35
CNTNAP3B-215ENST00000619138 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
CNTNAP3B-215ENST00000619138 MROH2AA6NES4 1674 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 MADDQ8WXG6 1647 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 RLBP1P12271 317 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 MRE11P49959 708 aa17.25■□□□□ 0.35
CNTNAP3B-215ENST00000619138 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
CNTNAP3B-215ENST00000619138 SYNMO15061 1565 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms