RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
KIF3A-208ENST00000618515 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
KIF3A-208ENST00000618515 WDR63Q8IWG1 891 aa16.77■□□□□ 0.28
KIF3A-208ENST00000618515 FSD2A1L4K1 749 aa16.77■□□□□ 0.27
KIF3A-208ENST00000618515 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
KIF3A-208ENST00000618515 APAF1O14727 1248 aa16.76■□□□□ 0.27
KIF3A-208ENST00000618515 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
KIF3A-208ENST00000618515 BCAR3O75815 825 aa16.75■□□□□ 0.27
KIF3A-208ENST00000618515 RGS3P49796 1198 aa16.75■□□□□ 0.27
KIF3A-208ENST00000618515 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
KIF3A-208ENST00000618515 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
KIF3A-208ENST00000618515 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
KIF3A-208ENST00000618515 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
KIF3A-208ENST00000618515 FANCAO15360 1455 aa16.73■□□□□ 0.27
KIF3A-208ENST00000618515 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
KIF3A-208ENST00000618515 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
KIF3A-208ENST00000618515 ABCA9Q8IUA7 1624 aa16.71■□□□□ 0.27
KIF3A-208ENST00000618515 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
KIF3A-208ENST00000618515 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
KIF3A-208ENST00000618515 ZNF518AQ6AHZ1 1483 aa16.71■□□□□ 0.26
KIF3A-208ENST00000618515 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
KIF3A-208ENST00000618515 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
KIF3A-208ENST00000618515 SEC24BO95487 1268 aa16.7■□□□□ 0.26
KIF3A-208ENST00000618515 EFCAB2Q5VUJ9 269 aa16.7■□□□□ 0.26
KIF3A-208ENST00000618515 ADGRB3O60242 1522 aa16.69■□□□□ 0.26
KIF3A-208ENST00000618515 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
KIF3A-208ENST00000618515 CD109Q6YHK3 1445 aa16.69■□□□□ 0.26
KIF3A-208ENST00000618515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
KIF3A-208ENST00000618515 POGKQ9P215 609 aa16.69■□□□□ 0.26
KIF3A-208ENST00000618515 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
KIF3A-208ENST00000618515 QRICH2Q9H0J4 1663 aa16.68■□□□□ 0.26
KIF3A-208ENST00000618515 PPLO60437 1756 aa16.68■□□□□ 0.26
KIF3A-208ENST00000618515 NSD2O96028 1365 aa16.68■□□□□ 0.26
KIF3A-208ENST00000618515 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
KIF3A-208ENST00000618515 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
KIF3A-208ENST00000618515 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
KIF3A-208ENST00000618515 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
KIF3A-208ENST00000618515 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
KIF3A-208ENST00000618515 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
KIF3A-208ENST00000618515 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
KIF3A-208ENST00000618515 REREQ9P2R6 1566 aa16.66■□□□□ 0.26
KIF3A-208ENST00000618515 CLCN1P35523 988 aa16.65■□□□□ 0.26
KIF3A-208ENST00000618515 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
KIF3A-208ENST00000618515 MCM4P33991 863 aa16.65■□□□□ 0.26
KIF3A-208ENST00000618515 ADGRB1O14514 1584 aa16.64■□□□□ 0.26
KIF3A-208ENST00000618515 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
KIF3A-208ENST00000618515 CHMP5Q9NZZ3 219 aa16.64■□□□□ 0.25
KIF3A-208ENST00000618515 DDIT3P35638 169 aa16.63■□□□□ 0.25
KIF3A-208ENST00000618515 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
KIF3A-208ENST00000618515 COG6Q9Y2V7 657 aa16.63■□□□□ 0.25
KIF3A-208ENST00000618515 PCDHB15Q9Y5E8 787 aa16.63■□□□□ 0.25
KIF3A-208ENST00000618515 ANKRD26Q9UPS8 1709 aa16.63■□□□□ 0.25
KIF3A-208ENST00000618515 RRAGDQ9NQL2 400 aaPredicted RBP16.63■□□□□ 0.25
KIF3A-208ENST00000618515 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
KIF3A-208ENST00000618515 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
KIF3A-208ENST00000618515 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
KIF3A-208ENST00000618515 GOLGA6L3A6NEY3 463 aa16.62■□□□□ 0.25
KIF3A-208ENST00000618515 PTMSP20962 102 aa16.61■□□□□ 0.25
KIF3A-208ENST00000618515 SNX21Q969T3 373 aa16.61■□□□□ 0.25
KIF3A-208ENST00000618515 MVPQ14764 893 aaKnown RBP16.61■□□□□ 0.25
KIF3A-208ENST00000618515 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
KIF3A-208ENST00000618515 MRE11P49959 708 aa16.6■□□□□ 0.25
KIF3A-208ENST00000618515 MYH16Q9H6N6 1097 aa16.6■□□□□ 0.25
KIF3A-208ENST00000618515 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
KIF3A-208ENST00000618515 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
KIF3A-208ENST00000618515 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
KIF3A-208ENST00000618515 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
KIF3A-208ENST00000618515 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
KIF3A-208ENST00000618515 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
KIF3A-208ENST00000618515 IL16Q14005 1332 aa16.59■□□□□ 0.25
KIF3A-208ENST00000618515 MED14O60244 1454 aa16.58■□□□□ 0.25
KIF3A-208ENST00000618515 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
KIF3A-208ENST00000618515 DIP2BQ9P265 1576 aa16.58■□□□□ 0.24
KIF3A-208ENST00000618515 RLBP1P12271 317 aa16.57■□□□□ 0.24
KIF3A-208ENST00000618515 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
KIF3A-208ENST00000618515 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
KIF3A-208ENST00000618515 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
KIF3A-208ENST00000618515 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
KIF3A-208ENST00000618515 CDC42BPGQ6DT37 1551 aa16.56■□□□□ 0.24
KIF3A-208ENST00000618515 ARHGEF28Q8N1W1 1705 aaKnown RBP16.56■□□□□ 0.24
KIF3A-208ENST00000618515 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
KIF3A-208ENST00000618515 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
KIF3A-208ENST00000618515 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
KIF3A-208ENST00000618515 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
KIF3A-208ENST00000618515 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
KIF3A-208ENST00000618515 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
KIF3A-208ENST00000618515 NOS1P29475 1434 aa16.54■□□□□ 0.24
KIF3A-208ENST00000618515 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
KIF3A-208ENST00000618515 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
KIF3A-208ENST00000618515 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
KIF3A-208ENST00000618515 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
KIF3A-208ENST00000618515 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
KIF3A-208ENST00000618515 TRAK2O60296 914 aa16.53■□□□□ 0.24
KIF3A-208ENST00000618515 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
KIF3A-208ENST00000618515 ADGRF5Q8IZF2 1346 aa16.53■□□□□ 0.24
KIF3A-208ENST00000618515 KIDINS220Q9ULH0 1771 aa16.53■□□□□ 0.24
KIF3A-208ENST00000618515 ANKRD36BQ8N2N9 1353 aa16.52■□□□□ 0.24
KIF3A-208ENST00000618515 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
KIF3A-208ENST00000618515 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
KIF3A-208ENST00000618515 MORC1Q86VD1 984 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms