RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-221ENST00000618363 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-221ENST00000618363 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
SHANK2-221ENST00000618363 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-221ENST00000618363 TECPR2O15040 1411 aa17.01■□□□□ 0.31
SHANK2-221ENST00000618363 LAMC1P11047 1609 aa17■□□□□ 0.31
SHANK2-221ENST00000618363 SIRT1Q96EB6 747 aa17■□□□□ 0.31
SHANK2-221ENST00000618363 ORAI2Q96SN7 254 aa17■□□□□ 0.31
SHANK2-221ENST00000618363 POGKQ9P215 609 aa17■□□□□ 0.31
SHANK2-221ENST00000618363 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
SHANK2-221ENST00000618363 NRXN1Q9ULB1 1477 aa16.99■□□□□ 0.31
SHANK2-221ENST00000618363 NUTM2FA1L443 756 aa16.97■□□□□ 0.31
SHANK2-221ENST00000618363 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
SHANK2-221ENST00000618363 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.31
SHANK2-221ENST00000618363 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
SHANK2-221ENST00000618363 SAFB2Q14151 953 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHANK2-221ENST00000618363 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
SHANK2-221ENST00000618363 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
SHANK2-221ENST00000618363 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.3
SHANK2-221ENST00000618363 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
SHANK2-221ENST00000618363 ZNF772Q68DY9 489 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-221ENST00000618363 PRAM1Q96QH2 718 aa16.95■□□□□ 0.3
SHANK2-221ENST00000618363 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
SHANK2-221ENST00000618363 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
SHANK2-221ENST00000618363 FOXO3O43524 673 aa16.92■□□□□ 0.3
SHANK2-221ENST00000618363 POTEAQ6S8J7 498 aa16.92■□□□□ 0.3
SHANK2-221ENST00000618363 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
SHANK2-221ENST00000618363 LRP6O75581 1613 aa16.9■□□□□ 0.3
SHANK2-221ENST00000618363 C8orf37Q96NL8 207 aa16.89■□□□□ 0.29
SHANK2-221ENST00000618363 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
SHANK2-221ENST00000618363 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
SHANK2-221ENST00000618363 XPCQ01831 940 aaPredicted RBP16.88■□□□□ 0.29
SHANK2-221ENST00000618363 PSME1Q06323 249 aa16.88■□□□□ 0.29
SHANK2-221ENST00000618363 NGLY1Q96IV0 654 aa16.87■□□□□ 0.29
SHANK2-221ENST00000618363 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
SHANK2-221ENST00000618363 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-221ENST00000618363 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
SHANK2-221ENST00000618363 KCNA4P22459 653 aa16.86■□□□□ 0.29
SHANK2-221ENST00000618363 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
SHANK2-221ENST00000618363 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
SHANK2-221ENST00000618363 AFF2P51816 1311 aa16.86■□□□□ 0.29
SHANK2-221ENST00000618363 ADGRB1O14514 1584 aa16.85■□□□□ 0.29
SHANK2-221ENST00000618363 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
SHANK2-221ENST00000618363 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
SHANK2-221ENST00000618363 RXRBP28702 533 aa16.84■□□□□ 0.29
SHANK2-221ENST00000618363 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
SHANK2-221ENST00000618363 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
SHANK2-221ENST00000618363 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
SHANK2-221ENST00000618363 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
SHANK2-221ENST00000618363 PXDNQ92626 1479 aa16.81■□□□□ 0.28
SHANK2-221ENST00000618363 ANKARQ7Z5J8 1434 aa16.81■□□□□ 0.28
SHANK2-221ENST00000618363 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
SHANK2-221ENST00000618363 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
SHANK2-221ENST00000618363 PMFBP1Q8TBY8 1022 aa16.81■□□□□ 0.28
SHANK2-221ENST00000618363 SIN3AQ96ST3 1273 aa16.8■□□□□ 0.28
SHANK2-221ENST00000618363 QTRT2Q9H974 415 aaKnown RBP16.8■□□□□ 0.28
SHANK2-221ENST00000618363 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
SHANK2-221ENST00000618363 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
SHANK2-221ENST00000618363 L3MBTL2Q969R5 705 aa16.79■□□□□ 0.28
SHANK2-221ENST00000618363 USP21Q9UK80 565 aa16.79■□□□□ 0.28
SHANK2-221ENST00000618363 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
SHANK2-221ENST00000618363 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
SHANK2-221ENST00000618363 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-221ENST00000618363 KIAA1210Q9ULL0 1709 aa16.78■□□□□ 0.28
SHANK2-221ENST00000618363 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.28
SHANK2-221ENST00000618363 NBPF1Q3BBV0 1214 aa16.77■□□□□ 0.28
SHANK2-221ENST00000618363 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
SHANK2-221ENST00000618363 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
SHANK2-221ENST00000618363 COL22A1Q8NFW1 1626 aaPredicted RBP16.76■□□□□ 0.27
SHANK2-221ENST00000618363 ARHGEF10O15013 1369 aa16.76■□□□□ 0.27
SHANK2-221ENST00000618363 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
SHANK2-221ENST00000618363 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
SHANK2-221ENST00000618363 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
SHANK2-221ENST00000618363 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
SHANK2-221ENST00000618363 ARHGEF28Q8N1W1 1705 aaKnown RBP16.74■□□□□ 0.27
SHANK2-221ENST00000618363 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
SHANK2-221ENST00000618363 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
SHANK2-221ENST00000618363 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
SHANK2-221ENST00000618363 CENPJQ9HC77 1338 aaPredicted RBP16.72■□□□□ 0.27
SHANK2-221ENST00000618363 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
SHANK2-221ENST00000618363 PRR36Q9H6K5 1346 aa16.71■□□□□ 0.27
SHANK2-221ENST00000618363 MSH5O43196 834 aa16.71■□□□□ 0.27
SHANK2-221ENST00000618363 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
SHANK2-221ENST00000618363 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
SHANK2-221ENST00000618363 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
SHANK2-221ENST00000618363 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
SHANK2-221ENST00000618363 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
SHANK2-221ENST00000618363 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
SHANK2-221ENST00000618363 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
SHANK2-221ENST00000618363 UNC5CLQ8IV45 518 aa16.67■□□□□ 0.26
SHANK2-221ENST00000618363 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
SHANK2-221ENST00000618363 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
SHANK2-221ENST00000618363 ATP7BP35670 1465 aa16.65■□□□□ 0.26
SHANK2-221ENST00000618363 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
SHANK2-221ENST00000618363 ATRNO75882 1429 aa16.64■□□□□ 0.25
SHANK2-221ENST00000618363 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
SHANK2-221ENST00000618363 GJD4Q96KN9 370 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-221ENST00000618363 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
SHANK2-221ENST00000618363 ACEP12821 1306 aa16.64■□□□□ 0.25
SHANK2-221ENST00000618363 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms