RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ZFYVE27Q5T4F4 411 aa13.48□□□□□ -0.25
CCDC144B-208ENST00000618081 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
CCDC144B-208ENST00000618081 OFD1O75665 1012 aa13.48□□□□□ -0.25
CCDC144B-208ENST00000618081 RIPK4P57078 832 aa13.48□□□□□ -0.25
CCDC144B-208ENST00000618081 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
CCDC144B-208ENST00000618081 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
CCDC144B-208ENST00000618081 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
CCDC144B-208ENST00000618081 ZNF771Q7L3S4 317 aaPredicted RBP13.47□□□□□ -0.25
CCDC144B-208ENST00000618081 TMEM132AQ24JP5 1023 aa13.46□□□□□ -0.25
CCDC144B-208ENST00000618081 ZBED9Q6R2W3 1325 aa13.46□□□□□ -0.25
CCDC144B-208ENST00000618081 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
CCDC144B-208ENST00000618081 ARGLU1Q9NWB6 273 aaPredicted RBP13.46□□□□□ -0.25
CCDC144B-208ENST00000618081 PSMA5P28066 241 aa13.46□□□□□ -0.25
CCDC144B-208ENST00000618081 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.26
CCDC144B-208ENST00000618081 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 FYB1O15117 783 aa13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 PTPRGP23470 1445 aa13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 NUCB2P80303 420 aa13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
CCDC144B-208ENST00000618081 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 WASHC4Q2M389 1173 aa13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 CALRP27797 417 aaKnown RBP13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 GNAI1P63096 354 aa13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
CCDC144B-208ENST00000618081 TXLNAP40222 546 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 HSP90B2PQ58FF3 399 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 CNTROBQ8N137 903 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 PAF1Q8N7H5 531 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 AAMPQ13685 434 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
CCDC144B-208ENST00000618081 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 SYCP1Q15431 976 aa13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 PDE4AP27815 886 aa13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 GSE1Q14687 1217 aa13.42□□□□□ -0.26
CCDC144B-208ENST00000618081 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 ZRSR2Q15696 482 aaKnown RBP13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 HIP1O00291 1037 aa13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 MNS1Q8NEH6 495 aa13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
CCDC144B-208ENST00000618081 PLIN1O60240 522 aa13.4□□□□□ -0.26
CCDC144B-208ENST00000618081 FOSBP53539 338 aa13.4□□□□□ -0.26
CCDC144B-208ENST00000618081 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
CCDC144B-208ENST00000618081 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
CCDC144B-208ENST00000618081 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
CCDC144B-208ENST00000618081 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
CCDC144B-208ENST00000618081 AIMP1Q12904 312 aaKnown RBP13.4□□□□□ -0.27
CCDC144B-208ENST00000618081 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
CCDC144B-208ENST00000618081 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
CCDC144B-208ENST00000618081 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
CCDC144B-208ENST00000618081 SMARCE1Q969G3 411 aa13.39□□□□□ -0.27
CCDC144B-208ENST00000618081 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.39□□□□□ -0.27
CCDC144B-208ENST00000618081 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
CCDC144B-208ENST00000618081 ERCC4Q92889 916 aaPredicted RBP13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 NLRP2Q9NX02 1062 aa13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 LETM1O95202 739 aaPredicted RBP13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 APAF1O14727 1248 aa13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 FYCO1Q9BQS8 1478 aa13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
CCDC144B-208ENST00000618081 PDILTQ8N807 584 aa13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 CCDC30Q5VVM6 783 aa13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 PDCP20941 246 aa13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 CCP110O43303 1012 aa13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
CCDC144B-208ENST00000618081 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 KINO60870 393 aaKnown RBP13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 ERC1Q8IUD2 1116 aa13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 ERLIN2O94905 339 aa13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 LUC7LQ9NQ29 371 aaKnown RBP13.36□□□□□ -0.27
CCDC144B-208ENST00000618081 HMOX1P09601 288 aa13.35□□□□□ -0.27
CCDC144B-208ENST00000618081 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
CCDC144B-208ENST00000618081 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
CCDC144B-208ENST00000618081 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
CCDC144B-208ENST00000618081 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 ABTB2Q8N961 1025 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 GAS2L2Q8NHY3 880 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 CWC15Q9P013 229 aaKnown RBP13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 KIF21BO75037 1637 aa13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
CCDC144B-208ENST00000618081 STIM1Q13586 685 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms