RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 DDB1Q16531 1140 aa13.67□□□□□ -0.22
POLR2A-209ENST00000617998 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
POLR2A-209ENST00000617998 HMOX1P09601 288 aa13.66□□□□□ -0.22
POLR2A-209ENST00000617998 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
POLR2A-209ENST00000617998 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
POLR2A-209ENST00000617998 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
POLR2A-209ENST00000617998 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
POLR2A-209ENST00000617998 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
POLR2A-209ENST00000617998 FYB1O15117 783 aa13.65□□□□□ -0.22
POLR2A-209ENST00000617998 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
POLR2A-209ENST00000617998 PANK3Q9H999 370 aa13.65□□□□□ -0.22
POLR2A-209ENST00000617998 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
POLR2A-209ENST00000617998 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
POLR2A-209ENST00000617998 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
POLR2A-209ENST00000617998 APPP05067 770 aa13.64□□□□□ -0.23
POLR2A-209ENST00000617998 APBA3O96018 575 aa13.64□□□□□ -0.23
POLR2A-209ENST00000617998 RALBP1Q15311 655 aa13.64□□□□□ -0.23
POLR2A-209ENST00000617998 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
POLR2A-209ENST00000617998 NBR1Q14596 966 aa13.64□□□□□ -0.23
POLR2A-209ENST00000617998 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
POLR2A-209ENST00000617998 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
POLR2A-209ENST00000617998 CHRNA2Q15822 529 aa13.63□□□□□ -0.23
POLR2A-209ENST00000617998 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
POLR2A-209ENST00000617998 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
POLR2A-209ENST00000617998 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
POLR2A-209ENST00000617998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.63□□□□□ -0.231e-6■■■□□ 14.7
POLR2A-209ENST00000617998 LMOD1P29536 600 aaPredicted RBP13.63□□□□□ -0.23
POLR2A-209ENST00000617998 QTRT2Q9H974 415 aaKnown RBP13.62□□□□□ -0.23
POLR2A-209ENST00000617998 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
POLR2A-209ENST00000617998 PARP3Q9Y6F1 533 aa13.62□□□□□ -0.23
POLR2A-209ENST00000617998 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
POLR2A-209ENST00000617998 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
POLR2A-209ENST00000617998 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
POLR2A-209ENST00000617998 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
POLR2A-209ENST00000617998 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
POLR2A-209ENST00000617998 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
POLR2A-209ENST00000617998 FKBP5Q13451 457 aaPredicted RBP13.61□□□□□ -0.23
POLR2A-209ENST00000617998 CNNM1Q9NRU3 951 aa13.61□□□□□ -0.23
POLR2A-209ENST00000617998 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
POLR2A-209ENST00000617998 ST5P78524 1137 aa13.6□□□□□ -0.23
POLR2A-209ENST00000617998 IDI1Q13907 227 aa13.6□□□□□ -0.23
POLR2A-209ENST00000617998 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
POLR2A-209ENST00000617998 AKAP17AQ02040 695 aaKnown RBP13.6□□□□□ -0.23
POLR2A-209ENST00000617998 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
POLR2A-209ENST00000617998 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
POLR2A-209ENST00000617998 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
POLR2A-209ENST00000617998 UHRF1BP1LA0JNW5 1464 aa13.59□□□□□ -0.23
POLR2A-209ENST00000617998 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
POLR2A-209ENST00000617998 NF2P35240 595 aa13.59□□□□□ -0.23
POLR2A-209ENST00000617998 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.236e-7■■■□□ 15.6
POLR2A-209ENST00000617998 CERKQ8TCT0 537 aa13.58□□□□□ -0.23
POLR2A-209ENST00000617998 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
POLR2A-209ENST00000617998 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
POLR2A-209ENST00000617998 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
POLR2A-209ENST00000617998 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
POLR2A-209ENST00000617998 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
POLR2A-209ENST00000617998 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 RIPK4P57078 832 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 WWC2Q6AWC2 1192 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 WWC1Q8IX03 1113 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
POLR2A-209ENST00000617998 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
POLR2A-209ENST00000617998 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
POLR2A-209ENST00000617998 PNISRQ8TF01 805 aaKnown RBP13.55□□□□□ -0.24
POLR2A-209ENST00000617998 A0A087WZG4 1122 aa13.55□□□□□ -0.24
POLR2A-209ENST00000617998 BIN2Q9UBW5 565 aaPredicted RBP13.55□□□□□ -0.24
POLR2A-209ENST00000617998 KIF14Q15058 1648 aa13.55□□□□□ -0.24
POLR2A-209ENST00000617998 TMEM87AQ8NBN3 555 aa13.55□□□□□ -0.24
POLR2A-209ENST00000617998 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
POLR2A-209ENST00000617998 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
POLR2A-209ENST00000617998 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
POLR2A-209ENST00000617998 MYL6BP14649 208 aa13.54□□□□□ -0.24
POLR2A-209ENST00000617998 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
POLR2A-209ENST00000617998 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
POLR2A-209ENST00000617998 FGD6Q6ZV73 1430 aa13.53□□□□□ -0.24
POLR2A-209ENST00000617998 IGHMBP2P38935 993 aaKnown RBP13.53□□□□□ -0.24
POLR2A-209ENST00000617998 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
POLR2A-209ENST00000617998 CCDC141Q6ZP82 1450 aa13.52□□□□□ -0.24
POLR2A-209ENST00000617998 KIF21BO75037 1637 aa13.52□□□□□ -0.24
POLR2A-209ENST00000617998 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
POLR2A-209ENST00000617998 C11orf95C9JLR9 678 aaPredicted RBP13.52□□□□□ -0.25
POLR2A-209ENST00000617998 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
POLR2A-209ENST00000617998 MYO1BO43795 1136 aa13.52□□□□□ -0.25
POLR2A-209ENST00000617998 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
POLR2A-209ENST00000617998 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 IFIT2P09913 472 aaKnown RBP13.51□□□□□ -0.25
POLR2A-209ENST00000617998 AIDAQ96BJ3 306 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 RGS3P49796 1198 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 TMEM132AQ24JP5 1023 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 BECN1Q14457 450 aa13.51□□□□□ -0.25
POLR2A-209ENST00000617998 ERICH2A1L162 156 aa13.5□□□□□ -0.25
POLR2A-209ENST00000617998 KCNA6P17658 529 aa13.5□□□□□ -0.25
POLR2A-209ENST00000617998 BTBD11A6QL63 1104 aa13.5□□□□□ -0.25
POLR2A-209ENST00000617998 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms