RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-219	ENST00000617757	WASHC2A	Q641Q2	1341 aa		11.27	□□□□□ -0.61
TARDBP-219	ENST00000617757	CCDC7	Q96M83	1385 aa		11.27	□□□□□ -0.61
TARDBP-219	ENST00000617757	DISP3	Q9P2K9	1392 aa		11.27	□□□□□ -0.61
TARDBP-219	ENST00000617757	MYOM1	P52179	1685 aa		11.27	□□□□□ -0.61
TARDBP-219	ENST00000617757	NALCN	Q8IZF0	1738 aa		11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	TULP4	Q9NRJ4	1543 aa		11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	SLC24A1	O60721	1099 aa		11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	TMF1	P82094	1093 aa		11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	WAPL	Q7Z5K2	1190 aa		11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	KIF7	Q2M1P5	1343 aa		11.26	□□□□□ -0.61
TARDBP-219	ENST00000617757	XIRP1	Q702N8	1843 aa	Known RBP	11.25	□□□□□ -0.61
TARDBP-219	ENST00000617757	ADGRB2	O60241	1585 aa		11.25	□□□□□ -0.61
TARDBP-219	ENST00000617757	KCNA6	P17658	529 aa		11.25	□□□□□ -0.61
TARDBP-219	ENST00000617757	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.24	□□□□□ -0.61
TARDBP-219	ENST00000617757	RGPD8	O14715	1765 aa	Predicted RBP	11.23	□□□□□ -0.61
TARDBP-219	ENST00000617757	DMRT2	Q9Y5R5	561 aa		11.23	□□□□□ -0.61
TARDBP-219	ENST00000617757	NKTR	P30414	1462 aa	Known RBP	11.23	□□□□□ -0.61
TARDBP-219	ENST00000617757	EVC2	Q86UK5	1308 aa		11.22	□□□□□ -0.61
TARDBP-219	ENST00000617757	POLR3GL	Q9BT43	218 aa		11.22	□□□□□ -0.61
TARDBP-219	ENST00000617757	FMN2	Q9NZ56	1722 aa		11.22	□□□□□ -0.61
TARDBP-219	ENST00000617757	DDX10	Q13206	875 aa	Known RBP	11.21	□□□□□ -0.61
TARDBP-219	ENST00000617757	CDCA8	Q53HL2	280 aa		11.21	□□□□□ -0.61
TARDBP-219	ENST00000617757	ITSN1	Q15811	1721 aa		11.21	□□□□□ -0.62
TARDBP-219	ENST00000617757	PUS7	Q96PZ0	661 aa	Known RBP	11.2	□□□□□ -0.62
TARDBP-219	ENST00000617757	TOPAZ1	Q8N9V7	1692 aa		11.2	□□□□□ -0.62
TARDBP-219	ENST00000617757	USP32	Q8NFA0	1604 aa		11.2	□□□□□ -0.62
TARDBP-219	ENST00000617757	WASL	O00401	505 aa	Predicted RBP	11.19	□□□□□ -0.62
TARDBP-219	ENST00000617757	CDK19	Q9BWU1	502 aa		11.19	□□□□□ -0.62
TARDBP-219	ENST00000617757	CDC42BPG	Q6DT37	1551 aa		11.19	□□□□□ -0.62
TARDBP-219	ENST00000617757	PROSER2	Q86WR7	435 aa	Predicted RBP	11.18	□□□□□ -0.62
TARDBP-219	ENST00000617757	CABP2	Q9NPB3	220 aa		11.18	□□□□□ -0.62
TARDBP-219	ENST00000617757	ADGRL3	Q9HAR2	1447 aa		11.18	□□□□□ -0.62
TARDBP-219	ENST00000617757	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.17	□□□□□ -0.62
TARDBP-219	ENST00000617757	SRPK2	P78362	688 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-219	ENST00000617757	DIEXF	Q68CQ4	756 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-219	ENST00000617757	RBM33	Q96EV2	1170 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-219	ENST00000617757	LRRC7	Q96NW7	1537 aa		11.17	□□□□□ -0.62
TARDBP-219	ENST00000617757	AKAP12	Q02952	1782 aa		11.17	□□□□□ -0.62
TARDBP-219	ENST00000617757	ATP7B	P35670	1465 aa		11.16	□□□□□ -0.62
TARDBP-219	ENST00000617757	NCOA3	Q9Y6Q9	1424 aa		11.16	□□□□□ -0.62
TARDBP-219	ENST00000617757	ATAD2	Q6PL18	1390 aa		11.16	□□□□□ -0.62
TARDBP-219	ENST00000617757	SCAF1	Q9H7N4	1312 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-219	ENST00000617757	LTBP4	Q8N2S1	1624 aa		11.15	□□□□□ -0.62
TARDBP-219	ENST00000617757	TMEM94	Q12767	1356 aa		11.15	□□□□□ -0.63
TARDBP-219	ENST00000617757	PRR36	Q9H6K5	1346 aa		11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	MON2	Q7Z3U7	1717 aa		11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	C14orf37	Q86TY3	774 aa		11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	TMC1	Q8TDI8	760 aa		11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	NUDT16	Q96DE0	195 aa	Known RBP	11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	PANK3	Q9H999	370 aa		11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	NINL	Q9Y2I6	1382 aa		11.13	□□□□□ -0.63
TARDBP-219	ENST00000617757	PPIP5K1	Q6PFW1	1433 aa		11.12	□□□□□ -0.63
TARDBP-219	ENST00000617757	SLC12A5	Q9H2X9	1139 aa		11.12	□□□□□ -0.63
TARDBP-219	ENST00000617757	C19orf44	Q9H6X5	657 aa		11.12	□□□□□ -0.63
TARDBP-219	ENST00000617757	CD163L1	Q9NR16	1453 aa		11.12	□□□□□ -0.63
TARDBP-219	ENST00000617757	DCC	P43146	1447 aa		11.11	□□□□□ -0.63
TARDBP-219	ENST00000617757	ANKAR	Q7Z5J8	1434 aa		11.11	□□□□□ -0.63
TARDBP-219	ENST00000617757	NUTM2F	A1L443	756 aa		11.11	□□□□□ -0.63
TARDBP-219	ENST00000617757	PER1	O15534	1290 aa	Predicted RBP	11.11	□□□□□ -0.63
TARDBP-219	ENST00000617757	CCDC61	Q9Y6R9	512 aa		11.11	□□□□□ -0.63
TARDBP-219	ENST00000617757	KIF20B	Q96Q89	1820 aa		11.11	□□□□□ -0.63
TARDBP-219	ENST00000617757	CABP1	Q9NZU7	370 aa		11.1	□□□□□ -0.63
TARDBP-219	ENST00000617757	ANKRD36B	Q8N2N9	1353 aa		11.1	□□□□□ -0.63
TARDBP-219	ENST00000617757	ANKRD26	Q9UPS8	1709 aa		11.09	□□□□□ -0.63
TARDBP-219	ENST00000617757	KIF1A	Q12756	1690 aa		11.09	□□□□□ -0.63
TARDBP-219	ENST00000617757	NRK	Q7Z2Y5	1582 aa		11.09	□□□□□ -0.63
TARDBP-219	ENST00000617757		A0A1W2PP64	1363 aa		11.09	□□□□□ -0.63
TARDBP-219	ENST00000617757	MSH6	P52701	1360 aa		11.09	□□□□□ -0.63
TARDBP-219	ENST00000617757	CPSF1	Q10570	1443 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-219	ENST00000617757	PLEKHG3	A1L390	1219 aa		11.08	□□□□□ -0.64
TARDBP-219	ENST00000617757	CARD14	Q9BXL6	1004 aa		11.08	□□□□□ -0.64
TARDBP-219	ENST00000617757	MST1R	Q04912	1400 aa		11.08	□□□□□ -0.64
TARDBP-219	ENST00000617757	C1orf167	Q5SNV9	1468 aa		11.07	□□□□□ -0.64
TARDBP-219	ENST00000617757	ATF3	P18847	181 aa		11.07	□□□□□ -0.64
TARDBP-219	ENST00000617757	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.07	□□□□□ -0.64
TARDBP-219	ENST00000617757	TERF2IP	Q9NYB0	399 aa		11.07	□□□□□ -0.64
TARDBP-219	ENST00000617757	NSD3	Q9BZ95	1437 aa		11.07	□□□□□ -0.64
TARDBP-219	ENST00000617757	POLR3A	O14802	1390 aa	Predicted RBP	11.06	□□□□□ -0.64
TARDBP-219	ENST00000617757	CADPS2	Q86UW7	1296 aa		11.06	□□□□□ -0.64
TARDBP-219	ENST00000617757	ACE	P12821	1306 aa		11.06	□□□□□ -0.64
TARDBP-219	ENST00000617757	KTN1	Q86UP2	1357 aa	Known RBP	11.05	□□□□□ -0.64
TARDBP-219	ENST00000617757	PMFBP1	Q8TBY8	1022 aa		11.05	□□□□□ -0.64
TARDBP-219	ENST00000617757	ZNF692	Q9BU19	519 aa	Predicted RBP	11.05	□□□□□ -0.64
TARDBP-219	ENST00000617757	PHF8	Q9UPP1	1060 aa		11.05	□□□□□ -0.64
TARDBP-219	ENST00000617757	KNSTRN	Q9Y448	316 aa		11.05	□□□□□ -0.64
TARDBP-219	ENST00000617757	ANP32C	O43423	234 aa		11.04	□□□□□ -0.64
TARDBP-219	ENST00000617757	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.04	□□□□□ -0.64
TARDBP-219	ENST00000617757	MIER1	Q8N108	512 aa		11.04	□□□□□ -0.64
TARDBP-219	ENST00000617757	ORAI2	Q96SN7	254 aa		11.04	□□□□□ -0.64
TARDBP-219	ENST00000617757	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.04	□□□□□ -0.64
TARDBP-219	ENST00000617757	NPC1L1	Q9UHC9	1359 aa		11.03	□□□□□ -0.64
TARDBP-219	ENST00000617757	EDC4	Q6P2E9	1401 aa	Known RBP	11.03	□□□□□ -0.64
TARDBP-219	ENST00000617757	ESCO1	Q5FWF5	840 aa		11.03	□□□□□ -0.64
TARDBP-219	ENST00000617757	NGDN	Q8NEJ9	315 aa	Known RBP	11.03	□□□□□ -0.64
TARDBP-219	ENST00000617757	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.03	□□□□□ -0.64
TARDBP-219	ENST00000617757	USP6	P35125	1406 aa		11.02	□□□□□ -0.64
TARDBP-219	ENST00000617757	SSH2	Q76I76	1423 aa		11.02	□□□□□ -0.64
TARDBP-219	ENST00000617757	PIK3C2A	O00443	1686 aa		11.02	□□□□□ -0.64
TARDBP-219	ENST00000617757	USP54	Q70EL1	1684 aa		11.02	□□□□□ -0.64

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