RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 GNAI1P63096 354 aa12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 ABCC5O15440 1437 aa12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
SMARCA1-205ENST00000617310 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 HSPA2P54652 639 aa12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 CLSTN1O94985 981 aa12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 DDX58O95786 925 aaKnown RBP12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
SMARCA1-205ENST00000617310 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-205ENST00000617310 FANCAO15360 1455 aa12.6□□□□□ -0.39
SMARCA1-205ENST00000617310 CAMSAP2Q08AD1 1489 aa12.6□□□□□ -0.39
SMARCA1-205ENST00000617310 WDR62O43379 1518 aa12.6□□□□□ -0.39
SMARCA1-205ENST00000617310 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 TATP17735 454 aaPredicted RBP12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 ANKRD30BQ9BXX2 1392 aa12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 EXOSC9Q06265 439 aaKnown RBP12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 RAD21O60216 631 aa12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
SMARCA1-205ENST00000617310 THUMPD2Q9BTF0 503 aaKnown RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 GZF1Q9H116 711 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 NME9Q86XW9 330 aa12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 USHBP1Q8N6Y0 703 aa12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 DENND4BO75064 1496 aaPredicted RBP12.58□□□□□ -0.4
SMARCA1-205ENST00000617310 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
SMARCA1-205ENST00000617310 NEUROD6Q96NK8 337 aa12.57□□□□□ -0.4
SMARCA1-205ENST00000617310 NCOA1Q15788 1441 aa12.57□□□□□ -0.4
SMARCA1-205ENST00000617310 FBLN1P23142 703 aa12.57□□□□□ -0.4
SMARCA1-205ENST00000617310 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 RPGRIP1LQ68CZ1 1315 aa12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 ASXL2Q76L83 1435 aa12.56□□□□□ -0.4
SMARCA1-205ENST00000617310 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 MIS18AQ9NYP9 233 aa12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 APPP05067 770 aa12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 IFIT2P09913 472 aaKnown RBP12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 G3BP1Q13283 466 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■□□□ 12.5
SMARCA1-205ENST00000617310 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
SMARCA1-205ENST00000617310 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 ANP32EQ9BTT0 268 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 MYL6BP14649 208 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 ATP10BO94823 1461 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 CABP4P57796 275 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 DIAPH3Q9NSV4 1193 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
SMARCA1-205ENST00000617310 DNTTIP2Q5QJE6 756 aaKnown RBP12.53□□□□□ -0.4
SMARCA1-205ENST00000617310 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
SMARCA1-205ENST00000617310 PBRM1Q86U86 1689 aa12.53□□□□□ -0.4
SMARCA1-205ENST00000617310 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
SMARCA1-205ENST00000617310 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
SMARCA1-205ENST00000617310 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
SMARCA1-205ENST00000617310 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.4
SMARCA1-205ENST00000617310 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
SMARCA1-205ENST00000617310 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
SMARCA1-205ENST00000617310 ROCK1Q13464 1354 aa12.52□□□□□ -0.41
SMARCA1-205ENST00000617310 BCAR3O75815 825 aa12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 CHRNA2Q15822 529 aa12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 CUL7Q14999 1698 aa12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 CENPQQ7L2Z9 268 aaPredicted RBP12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
SMARCA1-205ENST00000617310 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 FYB1O15117 783 aa12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 ANO2Q9NQ90 1003 aa12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 NOS1P29475 1434 aa12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 MCM10Q7L590 875 aa12.5□□□□□ -0.41
SMARCA1-205ENST00000617310 DHX29Q7Z478 1369 aaKnown RBP12.49□□□□□ -0.41
SMARCA1-205ENST00000617310 GPATCH8Q9UKJ3 1502 aaKnown RBP12.49□□□□□ -0.41
SMARCA1-205ENST00000617310 KIF14Q15058 1648 aa12.49□□□□□ -0.41
SMARCA1-205ENST00000617310 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
SMARCA1-205ENST00000617310 BICDL1Q6ZP65 573 aa12.49□□□□□ -0.41
SMARCA1-205ENST00000617310 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
SMARCA1-205ENST00000617310 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
SMARCA1-205ENST00000617310 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-205ENST00000617310 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
SMARCA1-205ENST00000617310 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-205ENST00000617310 SMG6Q86US8 1419 aaKnown RBP12.48□□□□□ -0.41
SMARCA1-205ENST00000617310 KAT6BQ8WYB5 2073 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 PDE4AP27815 886 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms