RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 CLTCL1P53675 1640 aa18.61■□□□□ 0.57
PRKD1-209ENST00000616995 E9PCH4 1651 aa18.61■□□□□ 0.57
PRKD1-209ENST00000616995 UHRF1BP1LA0JNW5 1464 aa18.61■□□□□ 0.57
PRKD1-209ENST00000616995 NPATQ14207 1427 aa18.61■□□□□ 0.57
PRKD1-209ENST00000616995 ZNF518AQ6AHZ1 1483 aa18.6■□□□□ 0.57
PRKD1-209ENST00000616995 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
PRKD1-209ENST00000616995 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
PRKD1-209ENST00000616995 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
PRKD1-209ENST00000616995 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
PRKD1-209ENST00000616995 MS4A1P11836 297 aa18.59■□□□□ 0.57
PRKD1-209ENST00000616995 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
PRKD1-209ENST00000616995 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
PRKD1-209ENST00000616995 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
PRKD1-209ENST00000616995 BLMP54132 1417 aaPredicted RBP18.58■□□□□ 0.57
PRKD1-209ENST00000616995 SHROOM2Q13796 1616 aa18.58■□□□□ 0.57
PRKD1-209ENST00000616995 PTPRTO14522 1441 aa18.58■□□□□ 0.57
PRKD1-209ENST00000616995 ZBTB7CA1YPR0 619 aa18.57■□□□□ 0.56
PRKD1-209ENST00000616995 TRPM2O94759 1503 aa18.57■□□□□ 0.56
PRKD1-209ENST00000616995 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
PRKD1-209ENST00000616995 ERVK-7P63135 1459 aa18.57■□□□□ 0.56
PRKD1-209ENST00000616995 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
PRKD1-209ENST00000616995 DIAPH1O60610 1272 aaKnown RBP18.56■□□□□ 0.56
PRKD1-209ENST00000616995 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
PRKD1-209ENST00000616995 RLBP1P12271 317 aa18.55■□□□□ 0.56
PRKD1-209ENST00000616995 RARSP54136 660 aaKnown RBP18.55■□□□□ 0.56
PRKD1-209ENST00000616995 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
PRKD1-209ENST00000616995 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
PRKD1-209ENST00000616995 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
PRKD1-209ENST00000616995 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
PRKD1-209ENST00000616995 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
PRKD1-209ENST00000616995 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
PRKD1-209ENST00000616995 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
PRKD1-209ENST00000616995 YEATS2Q9ULM3 1422 aa18.52■□□□□ 0.56
PRKD1-209ENST00000616995 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
PRKD1-209ENST00000616995 APBB1O00213 710 aa18.52■□□□□ 0.56
PRKD1-209ENST00000616995 FYB1O15117 783 aa18.51■□□□□ 0.55
PRKD1-209ENST00000616995 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
PRKD1-209ENST00000616995 MADDQ8WXG6 1647 aa18.51■□□□□ 0.55
PRKD1-209ENST00000616995 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
PRKD1-209ENST00000616995 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
PRKD1-209ENST00000616995 DZIP1LQ8IYY4 767 aaKnown RBP18.5■□□□□ 0.55
PRKD1-209ENST00000616995 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
PRKD1-209ENST00000616995 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
PRKD1-209ENST00000616995 EMILIN1Q9Y6C2 1016 aa18.49■□□□□ 0.55
PRKD1-209ENST00000616995 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
PRKD1-209ENST00000616995 NME9Q86XW9 330 aa18.48■□□□□ 0.55
PRKD1-209ENST00000616995 RWDD1Q9H446 243 aaPredicted RBP18.48■□□□□ 0.55
PRKD1-209ENST00000616995 C1orf115Q9H7X2 142 aa18.48■□□□□ 0.55
PRKD1-209ENST00000616995 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
PRKD1-209ENST00000616995 SPHKAPQ2M3C7 1700 aa18.48■□□□□ 0.55
PRKD1-209ENST00000616995 POGZQ7Z3K3 1410 aa18.48■□□□□ 0.55
PRKD1-209ENST00000616995 SLC26A8Q96RN1 970 aa18.47■□□□□ 0.55
PRKD1-209ENST00000616995 NOB1Q9ULX3 412 aaKnown RBP18.47■□□□□ 0.55
PRKD1-209ENST00000616995 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
PRKD1-209ENST00000616995 CEBPAP49715 358 aaPredicted RBP18.46■□□□□ 0.55
PRKD1-209ENST00000616995 PDE3AQ14432 1141 aa18.46■□□□□ 0.55
PRKD1-209ENST00000616995 SSH1Q8WYL5 1049 aa18.46■□□□□ 0.55
PRKD1-209ENST00000616995 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
PRKD1-209ENST00000616995 PMFBP1Q8TBY8 1022 aa18.46■□□□□ 0.55
PRKD1-209ENST00000616995 NUTM2GQ5VZR2 741 aa18.45■□□□□ 0.54
PRKD1-209ENST00000616995 SEC24BO95487 1268 aa18.44■□□□□ 0.54
PRKD1-209ENST00000616995 WDR63Q8IWG1 891 aa18.44■□□□□ 0.54
PRKD1-209ENST00000616995 TET3O43151 1660 aa18.44■□□□□ 0.54
PRKD1-209ENST00000616995 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
PRKD1-209ENST00000616995 POLR3AO14802 1390 aaPredicted RBP18.43■□□□□ 0.54
PRKD1-209ENST00000616995 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
PRKD1-209ENST00000616995 COG3Q96JB2 828 aa18.43■□□□□ 0.54
PRKD1-209ENST00000616995 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
PRKD1-209ENST00000616995 LTV1Q96GA3 475 aaPredicted RBP18.42■□□□□ 0.54
PRKD1-209ENST00000616995 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
PRKD1-209ENST00000616995 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
PRKD1-209ENST00000616995 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
PRKD1-209ENST00000616995 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
PRKD1-209ENST00000616995 CEP152O94986 1710 aa18.4■□□□□ 0.54
PRKD1-209ENST00000616995 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
PRKD1-209ENST00000616995 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
PRKD1-209ENST00000616995 EFCAB6Q5THR3 1501 aa18.4■□□□□ 0.54
PRKD1-209ENST00000616995 ABCA6Q8N139 1617 aa18.4■□□□□ 0.54
PRKD1-209ENST00000616995 NFKBIBQ15653 356 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 TRMT2AQ8IZ69 625 aaKnown RBP18.39■□□□□ 0.53
PRKD1-209ENST00000616995 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 TRIM27P14373 513 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 BECN1Q14457 450 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 RBM33Q96EV2 1170 aaKnown RBP18.39■□□□□ 0.53
PRKD1-209ENST00000616995 PHACTR3Q96KR7 559 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 MAP3K4Q9Y6R4 1608 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 KIF1BO60333 1816 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 SYNMO15061 1565 aa18.39■□□□□ 0.53
PRKD1-209ENST00000616995 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
PRKD1-209ENST00000616995 HSP90AA1P07900 732 aaKnown RBP18.38■□□□□ 0.53
PRKD1-209ENST00000616995 MVPQ14764 893 aaKnown RBP18.38■□□□□ 0.53
PRKD1-209ENST00000616995 PNNQ9H307 717 aaKnown RBP18.38■□□□□ 0.53
PRKD1-209ENST00000616995 FRAT2O75474 233 aaPredicted RBP18.38■□□□□ 0.53
PRKD1-209ENST00000616995 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
PRKD1-209ENST00000616995 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
PRKD1-209ENST00000616995 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
PRKD1-209ENST00000616995 NUDT16Q96DE0 195 aaKnown RBP18.37■□□□□ 0.53
PRKD1-209ENST00000616995 ANKRD45Q5TZF3 282 aa18.37■□□□□ 0.53
PRKD1-209ENST00000616995 PPRC1Q5VV67 1664 aaKnown RBP18.37■□□□□ 0.53
PRKD1-209ENST00000616995 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms