RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ADAMTS2O95450 1211 aa21.93■■□□□ 1.1
UBXN1-218ENST00000616865 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
UBXN1-218ENST00000616865 NGLY1Q96IV0 654 aa21.91■■□□□ 1.1
UBXN1-218ENST00000616865 CCDC144AA2RUR9 1427 aa21.9■■□□□ 1.1
UBXN1-218ENST00000616865 MARF1Q9Y4F3 1742 aaKnown RBP21.9■■□□□ 1.1
UBXN1-218ENST00000616865 TECPR2O15040 1411 aa21.89■■□□□ 1.1
UBXN1-218ENST00000616865 MYOM2P54296 1465 aa21.89■■□□□ 1.09
UBXN1-218ENST00000616865 PXDNQ92626 1479 aa21.89■■□□□ 1.09
UBXN1-218ENST00000616865 RAB3GAP2Q9H2M9 1393 aa21.88■■□□□ 1.09
UBXN1-218ENST00000616865 SPATA31E1Q6ZUB1 1445 aa21.88■■□□□ 1.09
UBXN1-218ENST00000616865 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
UBXN1-218ENST00000616865 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
UBXN1-218ENST00000616865 FOXD1Q16676 465 aa21.87■■□□□ 1.09
UBXN1-218ENST00000616865 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
UBXN1-218ENST00000616865 USP21Q9UK80 565 aa21.86■■□□□ 1.09
UBXN1-218ENST00000616865 FMN2Q9NZ56 1722 aa21.85■■□□□ 1.09
UBXN1-218ENST00000616865 ATRNO75882 1429 aa21.84■■□□□ 1.09
UBXN1-218ENST00000616865 ESCO1Q5FWF5 840 aa21.84■■□□□ 1.09
UBXN1-218ENST00000616865 FNBP4Q8N3X1 1017 aaPredicted RBP21.84■■□□□ 1.09
UBXN1-218ENST00000616865 ANKRD30BQ9BXX2 1392 aa21.84■■□□□ 1.09
UBXN1-218ENST00000616865 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
UBXN1-218ENST00000616865 TRPC5Q9UL62 973 aaPredicted RBP21.83■■□□□ 1.09
UBXN1-218ENST00000616865 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.08
UBXN1-218ENST00000616865 ATAD2Q6PL18 1390 aa21.83■■□□□ 1.08
UBXN1-218ENST00000616865 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
UBXN1-218ENST00000616865 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
UBXN1-218ENST00000616865 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
UBXN1-218ENST00000616865 HRCP23327 699 aa21.8■■□□□ 1.08
UBXN1-218ENST00000616865 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
UBXN1-218ENST00000616865 PLEKHH1Q9ULM0 1364 aa21.79■■□□□ 1.08
UBXN1-218ENST00000616865 STK26Q9P289 416 aa21.79■■□□□ 1.08
UBXN1-218ENST00000616865 BCL9LQ86UU0 1499 aa21.78■■□□□ 1.08
UBXN1-218ENST00000616865 FOXO3O43524 673 aa21.78■■□□□ 1.08
UBXN1-218ENST00000616865 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
UBXN1-218ENST00000616865 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
UBXN1-218ENST00000616865 MPHOSPH9Q99550 1183 aa21.77■■□□□ 1.08
UBXN1-218ENST00000616865 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
UBXN1-218ENST00000616865 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
UBXN1-218ENST00000616865 EP400Q96L91 3159 aa21.75■■□□□ 1.07
UBXN1-218ENST00000616865 TMEM132EQ6IEE7 984 aa21.75■■□□□ 1.07
UBXN1-218ENST00000616865 USP32Q8NFA0 1604 aa21.74■■□□□ 1.07
UBXN1-218ENST00000616865 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
UBXN1-218ENST00000616865 NRXN1Q9ULB1 1477 aa21.73■■□□□ 1.07
UBXN1-218ENST00000616865 SLIT2O94813 1529 aa21.7■■□□□ 1.07
UBXN1-218ENST00000616865 GLI3P10071 1580 aa21.7■■□□□ 1.06
UBXN1-218ENST00000616865 SPATA31A3Q5VYP0 1347 aa21.7■■□□□ 1.06
UBXN1-218ENST00000616865 ABCA3Q99758 1704 aa21.69■■□□□ 1.06
UBXN1-218ENST00000616865 SIRT1Q96EB6 747 aa21.68■■□□□ 1.06
UBXN1-218ENST00000616865 GJD4Q96KN9 370 aaPredicted RBP21.68■■□□□ 1.06
UBXN1-218ENST00000616865 PLCH1Q4KWH8 1693 aa21.67■■□□□ 1.06
UBXN1-218ENST00000616865 TNS3Q68CZ2 1445 aa21.67■■□□□ 1.06
UBXN1-218ENST00000616865 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
UBXN1-218ENST00000616865 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
UBXN1-218ENST00000616865 NWD2Q9ULI1 1742 aa21.65■■□□□ 1.06
UBXN1-218ENST00000616865 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.06
UBXN1-218ENST00000616865 KRT28Q7Z3Y7 464 aa21.64■■□□□ 1.05
UBXN1-218ENST00000616865 UNC5CLQ8IV45 518 aa21.64■■□□□ 1.05
UBXN1-218ENST00000616865 ADGRB2O60241 1585 aa21.64■■□□□ 1.05
UBXN1-218ENST00000616865 DLC1Q96QB1 1528 aa21.64■■□□□ 1.05
UBXN1-218ENST00000616865 BRWD3Q6RI45 1802 aa21.64■■□□□ 1.05
UBXN1-218ENST00000616865 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
UBXN1-218ENST00000616865 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
UBXN1-218ENST00000616865 CCDC125Q86Z20 511 aa21.62■■□□□ 1.05
UBXN1-218ENST00000616865 PHF8Q9UPP1 1060 aa21.62■■□□□ 1.05
UBXN1-218ENST00000616865 ADGRB1O14514 1584 aa21.6■■□□□ 1.05
UBXN1-218ENST00000616865 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
UBXN1-218ENST00000616865 ANKARQ7Z5J8 1434 aa21.59■■□□□ 1.05
UBXN1-218ENST00000616865 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
UBXN1-218ENST00000616865 ZRANB1Q9UGI0 708 aa21.59■■□□□ 1.05
UBXN1-218ENST00000616865 TRPM3Q9HCF6 1732 aaPredicted RBP21.58■■□□□ 1.05
UBXN1-218ENST00000616865 HAP1P54257 671 aaPredicted RBP21.58■■□□□ 1.05
UBXN1-218ENST00000616865 PSME1Q06323 249 aa21.58■■□□□ 1.05
UBXN1-218ENST00000616865 BLMP54132 1417 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-218ENST00000616865 SAFB2Q14151 953 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBXN1-218ENST00000616865 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
UBXN1-218ENST00000616865 NRAPQ86VF7 1730 aa21.56■■□□□ 1.04
UBXN1-218ENST00000616865 CABLES1Q8TDN4 633 aa21.55■■□□□ 1.04
UBXN1-218ENST00000616865 ALS2Q96Q42 1657 aa21.55■■□□□ 1.04
UBXN1-218ENST00000616865 VPS72Q15906 364 aa21.54■■□□□ 1.04
UBXN1-218ENST00000616865 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
UBXN1-218ENST00000616865 TULP4Q9NRJ4 1543 aa21.52■■□□□ 1.04
UBXN1-218ENST00000616865 POGKQ9P215 609 aa21.52■■□□□ 1.04
UBXN1-218ENST00000616865 PLEKHG5O94827 1062 aa21.51■■□□□ 1.03
UBXN1-218ENST00000616865 LMOD2Q6P5Q4 547 aa21.51■■□□□ 1.03
UBXN1-218ENST00000616865 CRYBG1Q9Y4K1 1723 aa21.51■■□□□ 1.03
UBXN1-218ENST00000616865 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
UBXN1-218ENST00000616865 PMFBP1Q8TBY8 1022 aa21.5■■□□□ 1.03
UBXN1-218ENST00000616865 EIF3AQ14152 1382 aaKnown RBP21.49■■□□□ 1.03
UBXN1-218ENST00000616865 COL14A1Q05707 1796 aaKnown RBP21.49■■□□□ 1.03
UBXN1-218ENST00000616865 ITSN1Q15811 1721 aa21.47■■□□□ 1.03
UBXN1-218ENST00000616865 ARHGEF28Q8N1W1 1705 aaKnown RBP21.47■■□□□ 1.03
UBXN1-218ENST00000616865 ONECUT3O60422 494 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-218ENST00000616865 HIRIP3Q9BW71 556 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-218ENST00000616865 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
UBXN1-218ENST00000616865 CCDC9Q9Y3X0 531 aaKnown RBP21.47■■□□□ 1.03
UBXN1-218ENST00000616865 PRR36Q9H6K5 1346 aa21.46■■□□□ 1.03
UBXN1-218ENST00000616865 FAM83GA6ND36 823 aa21.45■■□□□ 1.02
UBXN1-218ENST00000616865 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.02
UBXN1-218ENST00000616865 GPRASP1Q5JY77 1395 aa21.45■■□□□ 1.02
UBXN1-218ENST00000616865 SF3B2Q13435 895 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms