RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 E9PCH4 1651 aa16.86■□□□□ 0.29
PCDHA11-202ENST00000616325 ADCY10Q96PN6 1610 aa16.86■□□□□ 0.29
PCDHA11-202ENST00000616325 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
PCDHA11-202ENST00000616325 GAS2L3Q86XJ1 694 aa16.85■□□□□ 0.29
PCDHA11-202ENST00000616325 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
PCDHA11-202ENST00000616325 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
PCDHA11-202ENST00000616325 NUP160Q12769 1436 aa16.85■□□□□ 0.29
PCDHA11-202ENST00000616325 R3HCC1Q9Y3T6 440 aaKnown RBP16.84■□□□□ 0.29
PCDHA11-202ENST00000616325 PRDM15P57071 1507 aaPredicted RBP16.84■□□□□ 0.29
PCDHA11-202ENST00000616325 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
PCDHA11-202ENST00000616325 CFAP53Q96M91 514 aa16.83■□□□□ 0.29
PCDHA11-202ENST00000616325 ELL2O00472 640 aaPredicted RBP16.83■□□□□ 0.28
PCDHA11-202ENST00000616325 PDCL3Q9H2J4 239 aa16.83■□□□□ 0.28
PCDHA11-202ENST00000616325 ASXL1Q8IXJ9 1541 aa16.83■□□□□ 0.28
PCDHA11-202ENST00000616325 PDE3AQ14432 1141 aa16.83■□□□□ 0.28
PCDHA11-202ENST00000616325 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
PCDHA11-202ENST00000616325 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
PCDHA11-202ENST00000616325 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
PCDHA11-202ENST00000616325 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
PCDHA11-202ENST00000616325 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
PCDHA11-202ENST00000616325 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
PCDHA11-202ENST00000616325 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
PCDHA11-202ENST00000616325 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
PCDHA11-202ENST00000616325 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
PCDHA11-202ENST00000616325 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
PCDHA11-202ENST00000616325 KANK1Q14678 1352 aa16.81■□□□□ 0.28
PCDHA11-202ENST00000616325 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
PCDHA11-202ENST00000616325 FBLN1P23142 703 aa16.8■□□□□ 0.28
PCDHA11-202ENST00000616325 TPM2P07951 284 aa16.8■□□□□ 0.28
PCDHA11-202ENST00000616325 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
PCDHA11-202ENST00000616325 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
PCDHA11-202ENST00000616325 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
PCDHA11-202ENST00000616325 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
PCDHA11-202ENST00000616325 TNPO1Q92973 898 aaKnown RBP16.78■□□□□ 0.28
PCDHA11-202ENST00000616325 UGGT1Q9NYU2 1555 aa16.78■□□□□ 0.28
PCDHA11-202ENST00000616325 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
PCDHA11-202ENST00000616325 DZIP1LQ8IYY4 767 aaKnown RBP16.77■□□□□ 0.28
PCDHA11-202ENST00000616325 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
PCDHA11-202ENST00000616325 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.27
PCDHA11-202ENST00000616325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.27
PCDHA11-202ENST00000616325 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
PCDHA11-202ENST00000616325 DDX49Q9Y6V7 483 aaKnown RBP16.76■□□□□ 0.27
PCDHA11-202ENST00000616325 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
PCDHA11-202ENST00000616325 ZHX1Q9UKY1 873 aaPredicted RBP16.75■□□□□ 0.27
PCDHA11-202ENST00000616325 PIK3C2GO75747 1445 aa16.75■□□□□ 0.27
PCDHA11-202ENST00000616325 APBB1O00213 710 aa16.74■□□□□ 0.27
PCDHA11-202ENST00000616325 CFAP65Q6ZU64 1925 aaKnown RBP16.74■□□□□ 0.27
PCDHA11-202ENST00000616325 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
PCDHA11-202ENST00000616325 MYO5CQ9NQX4 1742 aa16.74■□□□□ 0.27
PCDHA11-202ENST00000616325 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
PCDHA11-202ENST00000616325 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
PCDHA11-202ENST00000616325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHA11-202ENST00000616325 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
PCDHA11-202ENST00000616325 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
PCDHA11-202ENST00000616325 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
PCDHA11-202ENST00000616325 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
PCDHA11-202ENST00000616325 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
PCDHA11-202ENST00000616325 DUOX2Q9NRD8 1548 aa16.72■□□□□ 0.27
PCDHA11-202ENST00000616325 TRIM27P14373 513 aa16.71■□□□□ 0.27
PCDHA11-202ENST00000616325 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
PCDHA11-202ENST00000616325 MPNDQ8N594 471 aa16.71■□□□□ 0.27
PCDHA11-202ENST00000616325 GOLGA6L22H0YM25 854 aa16.71■□□□□ 0.27
PCDHA11-202ENST00000616325 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
PCDHA11-202ENST00000616325 RIPK4P57078 832 aa16.71■□□□□ 0.27
PCDHA11-202ENST00000616325 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
PCDHA11-202ENST00000616325 MAST1Q9Y2H9 1570 aa16.7■□□□□ 0.26
PCDHA11-202ENST00000616325 ATP10AO60312 1499 aa16.7■□□□□ 0.26
PCDHA11-202ENST00000616325 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
PCDHA11-202ENST00000616325 NOS1P29475 1434 aa16.7■□□□□ 0.26
PCDHA11-202ENST00000616325 INSRP06213 1382 aa16.69■□□□□ 0.26
PCDHA11-202ENST00000616325 HMOX1P09601 288 aa16.69■□□□□ 0.26
PCDHA11-202ENST00000616325 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
PCDHA11-202ENST00000616325 ANKRD45Q5TZF3 282 aa16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 UQCRHLA0A096LP55 91 aa16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 UQCRHP07919 91 aa16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 SSFA2P28290 1259 aa16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 FOXD4L5Q5VV16 416 aaPredicted RBP16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 FOXD4L4Q8WXT5 416 aaPredicted RBP16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
PCDHA11-202ENST00000616325 CAVIN1Q6NZI2 390 aaKnown RBP16.67■□□□□ 0.26
PCDHA11-202ENST00000616325 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
PCDHA11-202ENST00000616325 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
PCDHA11-202ENST00000616325 PLCH2O75038 1416 aa16.67■□□□□ 0.26
PCDHA11-202ENST00000616325 MCTP1Q6DN14 999 aa16.66■□□□□ 0.26
PCDHA11-202ENST00000616325 OFD1O75665 1012 aa16.65■□□□□ 0.26
PCDHA11-202ENST00000616325 SKOR2Q2VWA4 1001 aaPredicted RBP16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 PTMAP06454 111 aaKnown RBP16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 SOX12O15370 315 aa16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
PCDHA11-202ENST00000616325 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
PCDHA11-202ENST00000616325 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
PCDHA11-202ENST00000616325 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
PCDHA11-202ENST00000616325 UNC13BO14795 1591 aa16.63■□□□□ 0.25
PCDHA11-202ENST00000616325 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
PCDHA11-202ENST00000616325 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
PCDHA11-202ENST00000616325 MADDQ8WXG6 1647 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms