RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
LHX1-202ENST00000616237 DLC1Q96QB1 1528 aa24.69■■□□□ 1.54
LHX1-202ENST00000616237 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
LHX1-202ENST00000616237 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
LHX1-202ENST00000616237 DDX17Q92841 729 aaKnown RBP24.67■■□□□ 1.54
LHX1-202ENST00000616237 PRAM1Q96QH2 718 aa24.67■■□□□ 1.54
LHX1-202ENST00000616237 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
LHX1-202ENST00000616237 TRAK1Q9UPV9 953 aa24.67■■□□□ 1.54
LHX1-202ENST00000616237 NHSL1Q5SYE7 1610 aa24.66■■□□□ 1.54
LHX1-202ENST00000616237 SAFB2Q14151 953 aaKnown RBP eCLIP24.65■■□□□ 1.54
LHX1-202ENST00000616237 JCADQ9P266 1359 aa24.63■■□□□ 1.53
LHX1-202ENST00000616237 NUTM2FA1L443 756 aa24.63■■□□□ 1.53
LHX1-202ENST00000616237 NBPF1Q3BBV0 1214 aa24.63■■□□□ 1.53
LHX1-202ENST00000616237 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
LHX1-202ENST00000616237 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
LHX1-202ENST00000616237 POGKQ9P215 609 aa24.61■■□□□ 1.53
LHX1-202ENST00000616237 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
LHX1-202ENST00000616237 ESCO1Q5FWF5 840 aa24.58■■□□□ 1.53
LHX1-202ENST00000616237 ARHGEF28Q8N1W1 1705 aaKnown RBP24.56■■□□□ 1.52
LHX1-202ENST00000616237 SOS2Q07890 1332 aaPredicted RBP24.56■■□□□ 1.52
LHX1-202ENST00000616237 SHPRHQ149N8 1683 aa24.55■■□□□ 1.52
LHX1-202ENST00000616237 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
LHX1-202ENST00000616237 ADGRB2O60241 1585 aa24.55■■□□□ 1.52
LHX1-202ENST00000616237 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
LHX1-202ENST00000616237 LRRC59Q96AG4 307 aaKnown RBP24.53■■□□□ 1.52
LHX1-202ENST00000616237 PCGF6Q9BYE7 350 aa24.53■■□□□ 1.52
LHX1-202ENST00000616237 RGS17Q9UGC6 210 aaPredicted RBP24.53■■□□□ 1.52
LHX1-202ENST00000616237 LRP6O75581 1613 aa24.53■■□□□ 1.52
LHX1-202ENST00000616237 SPATA31A6Q5VVP1 1343 aa24.51■■□□□ 1.51
LHX1-202ENST00000616237 FOXO3O43524 673 aa24.51■■□□□ 1.51
LHX1-202ENST00000616237 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
LHX1-202ENST00000616237 RGPD8O14715 1765 aaPredicted RBP24.5■■□□□ 1.51
LHX1-202ENST00000616237 NBPF8Q3BBV2 869 aa24.5■■□□□ 1.51
LHX1-202ENST00000616237 PNPLA6Q8IY17 1366 aa24.5■■□□□ 1.51
LHX1-202ENST00000616237 USP32Q8NFA0 1604 aa24.5■■□□□ 1.51
LHX1-202ENST00000616237 TRPM1Q7Z4N2 1603 aa24.49■■□□□ 1.51
LHX1-202ENST00000616237 PXDNQ92626 1479 aa24.49■■□□□ 1.51
LHX1-202ENST00000616237 NPHP3Q7Z494 1330 aa24.48■■□□□ 1.51
LHX1-202ENST00000616237 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
LHX1-202ENST00000616237 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
LHX1-202ENST00000616237 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
LHX1-202ENST00000616237 ANKARQ7Z5J8 1434 aa24.46■■□□□ 1.51
LHX1-202ENST00000616237 PHF8Q9UPP1 1060 aa24.45■■□□□ 1.5
LHX1-202ENST00000616237 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
LHX1-202ENST00000616237 KIF1AQ12756 1690 aa24.44■■□□□ 1.5
LHX1-202ENST00000616237 NUTM2BA6NNL0 878 aaPredicted RBP24.43■■□□□ 1.5
LHX1-202ENST00000616237 NUTM2EB1AL46 878 aaPredicted RBP24.43■■□□□ 1.5
LHX1-202ENST00000616237 NUTM2AQ8IVF1 878 aaPredicted RBP24.43■■□□□ 1.5
LHX1-202ENST00000616237 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
LHX1-202ENST00000616237 PMFBP1Q8TBY8 1022 aa24.41■■□□□ 1.5
LHX1-202ENST00000616237 ROCK2O75116 1388 aaKnown RBP24.4■■□□□ 1.5
LHX1-202ENST00000616237 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
LHX1-202ENST00000616237 KRT28Q7Z3Y7 464 aa24.39■■□□□ 1.49
LHX1-202ENST00000616237 CDK19Q9BWU1 502 aa24.39■■□□□ 1.49
LHX1-202ENST00000616237 EIF3AQ14152 1382 aaKnown RBP24.38■■□□□ 1.49
LHX1-202ENST00000616237 GPRASP1Q5JY77 1395 aa24.38■■□□□ 1.49
LHX1-202ENST00000616237 POTEAQ6S8J7 498 aa24.38■■□□□ 1.49
LHX1-202ENST00000616237 ATP7BP35670 1465 aa24.37■■□□□ 1.49
LHX1-202ENST00000616237 MEX3CQ5U5Q3 659 aaKnown RBP24.37■■□□□ 1.49
LHX1-202ENST00000616237 NUDT16Q96DE0 195 aaKnown RBP24.36■■□□□ 1.49
LHX1-202ENST00000616237 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
LHX1-202ENST00000616237 COL22A1Q8NFW1 1626 aaPredicted RBP24.36■■□□□ 1.49
LHX1-202ENST00000616237 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
LHX1-202ENST00000616237 RALGAPBQ86X10 1494 aa24.33■■□□□ 1.48
LHX1-202ENST00000616237 PSME1Q06323 249 aa24.32■■□□□ 1.48
LHX1-202ENST00000616237 ADAMTS2O95450 1211 aa24.3■■□□□ 1.48
LHX1-202ENST00000616237 TNS3Q68CZ2 1445 aa24.3■■□□□ 1.48
LHX1-202ENST00000616237 SBNO1A3KN83 1393 aa24.3■■□□□ 1.48
LHX1-202ENST00000616237 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
LHX1-202ENST00000616237 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
LHX1-202ENST00000616237 C8orf37Q96NL8 207 aa24.28■■□□□ 1.48
LHX1-202ENST00000616237 CABP2Q9NPB3 220 aa24.28■■□□□ 1.48
LHX1-202ENST00000616237 CCDC61Q9Y6R9 512 aa24.28■■□□□ 1.48
LHX1-202ENST00000616237 AFF2P51816 1311 aa24.27■■□□□ 1.48
LHX1-202ENST00000616237 CLSPNQ9HAW4 1339 aa24.27■■□□□ 1.48
LHX1-202ENST00000616237 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
LHX1-202ENST00000616237 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
LHX1-202ENST00000616237 SOCS7O14512 581 aa24.27■■□□□ 1.48
LHX1-202ENST00000616237 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
LHX1-202ENST00000616237 SRPK2P78362 688 aaKnown RBP24.26■■□□□ 1.47
LHX1-202ENST00000616237 ZNF772Q68DY9 489 aaPredicted RBP24.25■■□□□ 1.47
LHX1-202ENST00000616237 PLEKHG3A1L390 1219 aa24.24■■□□□ 1.47
LHX1-202ENST00000616237 POLR3AO14802 1390 aaPredicted RBP24.23■■□□□ 1.47
LHX1-202ENST00000616237 CABLES1Q8TDN4 633 aa24.22■■□□□ 1.47
LHX1-202ENST00000616237 NGLY1Q96IV0 654 aa24.22■■□□□ 1.47
LHX1-202ENST00000616237 ACEP12821 1306 aa24.22■■□□□ 1.47
LHX1-202ENST00000616237 LMOD2Q6P5Q4 547 aa24.21■■□□□ 1.47
LHX1-202ENST00000616237 ALS2Q96Q42 1657 aa24.21■■□□□ 1.47
LHX1-202ENST00000616237 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
LHX1-202ENST00000616237 ARHGEF10O15013 1369 aa24.2■■□□□ 1.47
LHX1-202ENST00000616237 PPIP5K1Q6PFW1 1433 aa24.2■■□□□ 1.46
LHX1-202ENST00000616237 PLEKHG5O94827 1062 aa24.19■■□□□ 1.46
LHX1-202ENST00000616237 SBNO2Q9Y2G9 1366 aa24.19■■□□□ 1.46
LHX1-202ENST00000616237 FNBP4Q8N3X1 1017 aaPredicted RBP24.18■■□□□ 1.46
LHX1-202ENST00000616237 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
LHX1-202ENST00000616237 MARF1Q9Y4F3 1742 aaKnown RBP24.17■■□□□ 1.46
LHX1-202ENST00000616237 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
LHX1-202ENST00000616237 CABP1Q9NZU7 370 aa24.16■■□□□ 1.46
LHX1-202ENST00000616237 ABCA3Q99758 1704 aa24.16■■□□□ 1.46
LHX1-202ENST00000616237 PAK3O75914 559 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms